CsaV3_4G037510 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTGTCCGTTCCCAACACCTTGGATTCTTCTCCCATTCATCGCCTTCTTCCTCAAATTCGTTCTCACTCCTCGTCTAACCAAAGAGAGAATGCATCCCAACAAGAGTTTTCTCTGCCAATTTCGAGAAGGTCTGCAATTTTGATCTCTTCGCTACCTTTCACTCTCGTTTCTGTATCTCCGTCAAAGGCAAGAGAAAGAAGGAACAAGAAGACCATTCCTCTCGAGGATTATCTCACCAGCCGTTAGTAATCTCAATTTTTGGTGTATTGCTATCTTCTGAGTTTCCTCTTAGTACTTTCAGTAGGTAGAAAGTCATTAAGTCTTGATTAGTAATTACGACATATTCTTCAATTTTCGTATCTAAATTCTATAATTCTACTGAAAATGTAGTGGAAGTTTGACTCACTACGAGTTGAGCTTCTCGTGGAGTTTATAGTTTTATTTCCAGTACTCAGAGAGATTTGTGATGTTTGTTGATTTAAGAAAATACCCATCGAAATCTCTTCTTTAATGGTTGGAAAATCTGGATTGGGAGAAGCATTTCTGTGTAGCTTTTCATATCTGCAATGATATTTTGAATGTAGCAAATGGACTGAAGTACTATGATGTTGAGGAGGGAAAGGGCCCTGTGGCAGAGAAGGGTTCCACAGTTCAGGTAATCTGTCTGGGAAATTTGAGAGCTGTTTTGCCTGTTCTTGAATTTTAACTTTTCTCTATATTAGCTTTCTATTACAGGTGCACTTTGATTGCCTCTATAGAGGGATTACAGCTGTGTCGAGTCGAGAATCTAAGCTCTTGGCTGGAAATCGTGTTATCGCCCAGGTTTTTACATTTTACTTGTGTGGATTTCATTTAATCAGTTGTTACCAAAAGACGCAGTGTTTACAAACGTGATGTTCTTTAGTCAACAACTTCAACTTTAGATCAATTCATTAACTAAGCGACTGGATGTAATCTAAATTTCTTCTTTCTTTACTTAGAGAGACGTGATATTTTAGACCCCAGTTGAATTTCTAATGTATATTGTCCCATGGTTTTATCAGCCTTATGAGTTCAAAGTAGGAGCCCCGCCCGGGAAGGAGCGGAAACGTGATTTTGTGGACAATCCAAATGGTCTGTTTTCAGCACAGGCTGCACCTAAACCCCCACCAGCAATGTACTCCATAACTGAAGGGATGAAAGTTGGGGGAAAGGTATCTCCTATCTCCATTCTTCTATTTTAAATTTTAGCATATGCTTGATTTGCAGGCAATCTTCTTCCTCTTTATAATATTCTCTCAACTTTTAAGTCTCGCCCATTTATCTTTATGAGGGTTTCATGGACTTTGTTTTTCTTCTACTTGCAGCGAAGGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAAGGAATGAATGAAATCCCAGTAAGTCCAATTTTAGATTTTTCCTTGTGCGTGACTTTTTGACCCATCGACTATTTCTTTTGAAATTTACTTACAATTCCATGTGAATGCATGAAAGCTCGGGACTAGAAAAGTTAGCCCCTGAATTCTAAGTTGTTAATGTCACCGAATTCTCAAGTATGGTGTCTAATTATCCATTACTTAAAGTAAGTCAATAATTTTACTATTTTTTTGTCCAACTTTTTGGCAGATTGGCTATTAAAAAATTGTCTGATCTCACTTTGCATGTGAACGCATGAAAACACGGGATTAAAATCTGGTCTGACTCCATGGTTTTTGTTGTCTTATCATCCAATTTGATATCAGAACGTTGTACTGAAAGAAAGTTATTTACTTTTATCGTGAAACATGTGCACATATGTTTTGGTTCACACTTTTTAGCCCCTCAACCAACGATGTCTCTTTTCTATGCAGGCTCTTTATTCTTTAGTTCAAATAAGATTTCAAATATACTGGTATGACTTTTTAATTTAATTTTTCAAAATAACCTGTTCAAGTAACTTCATTAACGGAACCCAAAAACGAGGAAAAAACTTGTATATACTTTAAGGACAGGTCAAGAATACTGTATATTGTTTGATAGCGAAATTGAAACCTTAAATATACTTTTAAAATGAATAGTGATTTGAAACAAAACAAAAGTTGTAAAGGGGTGTATTTAAAAAAAGTTCAAAAGATAAATTGCAGAATTTAAAAAATCATATAAAGTTTATGGGCAAAAGCCAAAATTTAGCCCCTTTTTTTCTTGTATGTGAGTATAATGAGTGGAGGAATCCAAGAAATGGTCAAGTCAAGTGCTCTTTGGTTTACTTATGTTATTTATGTCAATAATTGCGTGGAGGGTTGAGATAGAGATAAGATAACAACTTTTAGCTGTATGGTTATCAGATGTACATGTAATCCTGCTTTGTATTGGCAGCCTGGAGCTACTTTTGAATTGAACATCGAGCTTTTAGAAGTAGTGCAACCTGAAAAAGGTGGGGCCTGA ATGGCAGTGTCCGTTCCCAACACCTTGGATTCTTCTCCCATTCATCGCCTTCTTCCTCAAATTCGTTCTCACTCCTCGTCTAACCAAAGAGAGAATGCATCCCAACAAGAGTTTTCTCTGCCAATTTCGAGAAGGTCTGCAATTTTGATCTCTTCGCTACCTTTCACTCTCGTTTCTGTATCTCCGTCAAAGGCAAGAGAAAGAAGGAACAAGAAGACCATTCCTCTCGAGGATTATCTCACCAGCCCAAATGGACTGAAGTACTATGATGTTGAGGAGGGAAAGGGCCCTGTGGCAGAGAAGGGTTCCACAGTTCAGGTGCACTTTGATTGCCTCTATAGAGGGATTACAGCTGTGTCGAGTCGAGAATCTAAGCTCTTGGCTGGAAATCGTGTTATCGCCCAGCCTTATGAGTTCAAAGTAGGAGCCCCGCCCGGGAAGGAGCGGAAACGTGATTTTGTGGACAATCCAAATGGTCTGTTTTCAGCACAGGCTGCACCTAAACCCCCACCAGCAATGTACTCCATAACTGAAGGGATGAAAGTTGGGGGAAAGCGAAGGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAAGGAATGAATGAAATCCCACCTGGAGCTACTTTTGAATTGAACATCGAGCTTTTAGAAGTAGTGCAACCTGAAAAAGGTGGGGCCTGA ATGGCAGTGTCCGTTCCCAACACCTTGGATTCTTCTCCCATTCATCGCCTTCTTCCTCAAATTCGTTCTCACTCCTCGTCTAACCAAAGAGAGAATGCATCCCAACAAGAGTTTTCTCTGCCAATTTCGAGAAGGTCTGCAATTTTGATCTCTTCGCTACCTTTCACTCTCGTTTCTGTATCTCCGTCAAAGGCAAGAGAAAGAAGGAACAAGAAGACCATTCCTCTCGAGGATTATCTCACCAGCCCAAATGGACTGAAGTACTATGATGTTGAGGAGGGAAAGGGCCCTGTGGCAGAGAAGGGTTCCACAGTTCAGGTGCACTTTGATTGCCTCTATAGAGGGATTACAGCTGTGTCGAGTCGAGAATCTAAGCTCTTGGCTGGAAATCGTGTTATCGCCCAGCCTTATGAGTTCAAAGTAGGAGCCCCGCCCGGGAAGGAGCGGAAACGTGATTTTGTGGACAATCCAAATGGTCTGTTTTCAGCACAGGCTGCACCTAAACCCCCACCAGCAATGTACTCCATAACTGAAGGGATGAAAGTTGGGGGAAAGCGAAGGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAAGGAATGAATGAAATCCCACCTGGAGCTACTTTTGAATTGAACATCGAGCTTTTAGAAGTAGTGCAACCTGAAAAAGGTGGGGCCTGA MAVSVPNTLDSSPIHRLLPQIRSHSSSNQRENASQQEFSLPISRRSAILISSLPFTLVSVSPSKARERRNKKTIPLEDYLTSPNGLKYYDVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRVIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGKRRVIVPPEAGYGQKGMNEIPPGATFELNIELLEVVQPEKGGA* Homology
BLAST of CsaV3_4G037510 vs. NCBI nr
Match: XP_004145556.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic isoform X1 [Cucumis sativus] >KGN55525.1 hypothetical protein Csa_012855 [Cucumis sativus]) HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. NCBI nr
Match: XP_008453010.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucumis melo] >KAA0064658.1 peptidyl-prolyl cis-trans isomerase FKBP18 [Cucumis melo var. makuwa] >TYK19933.1 peptidyl-prolyl cis-trans isomerase FKBP18 [Cucumis melo var. makuwa]) HSP 1 Score: 439.1 bits (1128), Expect = 2.3e-119 Identity = 220/226 (97.35%), Postives = 222/226 (98.23%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. NCBI nr
Match: XP_038898611.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Benincasa hispida]) HSP 1 Score: 431.4 bits (1108), Expect = 4.8e-117 Identity = 217/227 (95.59%), Postives = 220/227 (96.92%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. NCBI nr
Match: XP_022982129.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita maxima]) HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-111 Identity = 206/228 (90.35%), Postives = 218/228 (95.61%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. NCBI nr
Match: XP_022941513.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita moschata]) HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111 Identity = 205/228 (89.91%), Postives = 218/228 (95.61%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy Swiss-Prot
Match: Q9LM71 (Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP18 PE=1 SV=2) HSP 1 Score: 307.0 bits (785), Expect = 1.8e-82 Identity = 157/214 (73.36%), Postives = 178/214 (83.18%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy Swiss-Prot
Match: Q9SR70 (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP16-4 PE=1 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.8e-24 Identity = 70/167 (41.92%), Postives = 91/167 (54.49%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy Swiss-Prot
Match: Q9LDY5 (Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP17-2 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.5e-08 Identity = 41/162 (25.31%), Postives = 66/162 (40.74%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy Swiss-Prot
Match: Q8LB65 (Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP17-3 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07 Identity = 50/191 (26.18%), Postives = 76/191 (39.79%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy Swiss-Prot
Match: Q54NB6 (FK506-binding protein 4 OS=Dictyostelium discoideum OX=44689 GN=fkbp4 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.5e-07 Identity = 49/165 (29.70%), Postives = 72/165 (43.64%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy TrEMBL
Match: A0A0A0L0S6 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_4G664330 PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 9.8e-124 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy TrEMBL
Match: A0A5D3D8R8 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00450 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119 Identity = 220/226 (97.35%), Postives = 222/226 (98.23%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy TrEMBL
Match: A0A1S3BUM2 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103493843 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119 Identity = 220/226 (97.35%), Postives = 222/226 (98.23%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy TrEMBL
Match: A0A6J1J3Q8 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111481058 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 8.6e-112 Identity = 206/228 (90.35%), Postives = 218/228 (95.61%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. ExPASy TrEMBL
Match: A0A6J1FSB4 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111446792 PE=4 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 1.9e-111 Identity = 205/228 (89.91%), Postives = 218/228 (95.61%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. TAIR 10
Match: AT1G20810.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 307.0 bits (785), Expect = 1.3e-83 Identity = 157/214 (73.36%), Postives = 178/214 (83.18%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. TAIR 10
Match: AT3G10060.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25 Identity = 70/167 (41.92%), Postives = 91/167 (54.49%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. TAIR 10
Match: AT1G18170.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 58.9 bits (141), Expect = 6.0e-09 Identity = 41/162 (25.31%), Postives = 66/162 (40.74%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. TAIR 10
Match: AT1G73655.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08 Identity = 50/191 (26.18%), Postives = 76/191 (39.79%), Query Frame = 0
BLAST of CsaV3_4G037510 vs. TAIR 10
Match: AT4G19830.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05 Identity = 50/189 (26.46%), Postives = 78/189 (41.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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