CsaV3_4G036740 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G036740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	zinc finger protein 1-like
Location	chr4: 25844106 .. 25845183 (+)
RNA-Seq Expression	CsaV3_4G036740
Synteny	CsaV3_4G036740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTAAGAAGAGAGAGACCGAAAATGATTTTTTTTGAAATTTTATGTACAGTATAGTTTTAGCCTTTTTATGTACAGTTTTCTTTAATGTGTCCTTCAAAGATCTAAACCATTATCCATTCATATTCAAAACAAATCAAATTCCATTTTCTCAACCGAGAAAAGAAAAAGAAAGATCTCAGCTTTCTTCTTCTTCTTCTTCTGATCAGTAATTTTTCTGTCCTCAATGGAATCACACACCGACGGGAACCCATTTTCCGGCGAGCTGGCCGGGGAAGAAGACGATAGCGGGGAGTTTAGCGAGGAGCGGAGCAGTCTTTTGGAGCTTCAACTCTCATCGAATTCATCAGATCATTCAACGAACAAACCAAGAATTTTCTCATGTAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCATTAGGAGGCCATCAAAATGCCCACAAGAGAGAAAGAACTTTAGCCAAACGAGTTCAGAAATTCGATTGGGCGGCGGCGGCGATTCCACTCCACGGCGGCGCGTTTGATCGACGGTCGTCGTCGTCGTTGGGACTTCACGCTCACTCTCAACAAATACAAAAGCCACCTACTGTTGGGTTGTTTTTTGGTGGGGCAGCAGCACCCAGTGGTTCTCAGTTGTGGCCAAGGCCAATGTTTATGGGGCAGCAACCGGCGGTGGGGCGGTTGACGGCCGAGCTTGGTGGCCGGAATTTTGGAAGATATGATGACGTGGCTGAGTGGACGGCGATTGGAACCTCAAACGCCGGTAATAATAATAACAGTAATATTGTTCATTCTCAAACGAAACAGGAAAAGGATCAGAACAATTTCTTAGATTTATCTCTTAAACTCTAACTTCAAAACAAATTATTATTATTGTTGTTACTATTATTATGATTATTGTAATTCAGTTTATCCTAATTGTTAGGTTAATTAAATTGTTCTTTTTAACTTCATATATGAAGTTGTGTTTGTTTAATTAGTGGTATATTTATGAATTTATTTAGTGAAAAAACTACATTATTAGACTGTTTAGAACTACGGATTTTGGAGTTTTACATTATTGTTGGATCTGGG

mRNA sequence

ATGGAATCACACACCGACGGGAACCCATTTTCCGGCGAGCTGGCCGGGGAAGAAGACGATAGCGGGGAGTTTAGCGAGGAGCGGAGCAGTCTTTTGGAGCTTCAACTCTCATCGAATTCATCAGATCATTCAACGAACAAACCAAGAATTTTCTCATGTAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCATTAGGAGGCCATCAAAATGCCCACAAGAGAGAAAGAACTTTAGCCAAACGAGTTCAGAAATTCGATTGGGCGGCGGCGGCGATTCCACTCCACGGCGGCGCGTTTGATCGACGGTCGTCGTCGTCGTTGGGACTTCACGCTCACTCTCAACAAATACAAAAGCCACCTACTGTTGGGTTGTTTTTTGGTGGGGCAGCAGCACCCAGTGGTTCTCAGTTGTGGCCAAGGCCAATGTTTATGGGGCAGCAACCGGCGGTGGGGCGGTTGACGGCCGAGCTTGGTGGCCGGAATTTTGGAAGATATGATGACGTGGCTGAGTGGACGGCGATTGGAACCTCAAACGCCGGTAATAATAATAACAGTAATATTGTTCATTCTCAAACGAAACAGGAAAAGGATCAGAACAATTTCTTAGATTTATCTCTTAAACTCTAA

Coding sequence (CDS)

ATGGAATCACACACCGACGGGAACCCATTTTCCGGCGAGCTGGCCGGGGAAGAAGACGATAGCGGGGAGTTTAGCGAGGAGCGGAGCAGTCTTTTGGAGCTTCAACTCTCATCGAATTCATCAGATCATTCAACGAACAAACCAAGAATTTTCTCATGTAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCATTAGGAGGCCATCAAAATGCCCACAAGAGAGAAAGAACTTTAGCCAAACGAGTTCAGAAATTCGATTGGGCGGCGGCGGCGATTCCACTCCACGGCGGCGCGTTTGATCGACGGTCGTCGTCGTCGTTGGGACTTCACGCTCACTCTCAACAAATACAAAAGCCACCTACTGTTGGGTTGTTTTTTGGTGGGGCAGCAGCACCCAGTGGTTCTCAGTTGTGGCCAAGGCCAATGTTTATGGGGCAGCAACCGGCGGTGGGGCGGTTGACGGCCGAGCTTGGTGGCCGGAATTTTGGAAGATATGATGACGTGGCTGAGTGGACGGCGATTGGAACCTCAAACGCCGGTAATAATAATAACAGTAATATTGTTCATTCTCAAACGAAACAGGAAAAGGATCAGAACAATTTCTTAGATTTATCTCTTAAACTCTAA

Protein sequence

MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGTSNAGNNNNSNIVHSQTKQEKDQNNFLDLSLKL*

Homology

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BLAST of CsaV3_4G036740 vs. NCBI nr
Match: XP_011654418.2 (zinc finger protein 1 [Cucumis sativus] >KAE8649945.1 hypothetical protein Csa_012826 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 5.1e-113
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKF 60
           MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKF
Sbjct: 1   MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKP 120
           FSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKP
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKP 120

Query: 121 PTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGTSNA 180
           PTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGTSNA
Sbjct: 121 PTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGTSNA 180

Query: 181 GNNNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           GNNNNSNIVHSQTKQEKDQNNFLDLSLKL
Sbjct: 181 GNNNNSNIVHSQTKQEKDQNNFLDLSLKL 209

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BLAST of CsaV3_4G036740 vs. NCBI nr
Match: XP_008453080.1 (PREDICTED: zinc finger protein 1-like [Cucumis melo] >KAA0064597.1 zinc finger protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 361.3 bits (926), Expect = 5.6e-96
Identity = 191/215 (88.84%), Postives = 194/215 (90.23%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKF 60
           MESHTDGNPFSGE  GEEDD  EFSEERSSLLELQLSSN+S  STNKPRIFSCNYCQRKF
Sbjct: 1   MESHTDGNPFSGE--GEEDDEKEFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKP 120
           FSSQALGGHQNAHKRERTLAKRVQKFDW AAAIPLHGGAFDRR  SSLGLHAHSQQIQKP
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQKFDW-AAAIPLHGGAFDRR--SSLGLHAHSQQIQKP 120

Query: 121 PTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGTSNA 180
           P VGLFFGGA   SGSQLWPRPMFMGQQPAVGRL AELGGRNFGRYDDVAEWTAIGTSNA
Sbjct: 121 PAVGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNA 180

Query: 181 G------NNNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           G      NNNNSNIVHSQT+Q+KDQ NFLDLSLKL
Sbjct: 181 GNESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

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BLAST of CsaV3_4G036740 vs. NCBI nr
Match: XP_038899458.1 (zinc finger protein 1-like [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-84
Identity = 178/218 (81.65%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDD----SGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYC 60
           MES TD NPFSG+  GEEDD    +GEFS++RSSLLELQLSSNS D ST KPRIFSCNYC
Sbjct: 1   MESQTDRNPFSGD--GEEDDEKEITGEFSDDRSSLLELQLSSNSPD-STTKPRIFSCNYC 60

Query: 61  QRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAA---IPLHGGAFDRRSSSSLGLHAH 120
           QRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAA   IPLHGGAFDRR  SSLG+HAH
Sbjct: 61  QRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAAAASIPLHGGAFDRR--SSLGIHAH 120

Query: 121 SQQIQKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWT 180
           SQQIQK P VGLFFGG A P+ SQLWPRP+FMGQQPAVGRLTAE+GGRNFGR+D+VA W 
Sbjct: 121 SQQIQK-PAVGLFFGG-AGPASSQLWPRPLFMGQQPAVGRLTAEVGGRNFGRFDEVAGWA 180

Query: 181 AIGTSNAGN--NNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           AIG+SNAGN  NNN NIVHSQTKQ++DQ+NFLDLSLKL
Sbjct: 181 AIGSSNAGNESNNNVNIVHSQTKQDQDQSNFLDLSLKL 211

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BLAST of CsaV3_4G036740 vs. NCBI nr
Match: KAG7024430.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289.7 bits (740), Expect = 2.1e-74
Identity = 162/214 (75.70%), Postives = 178/214 (83.18%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDD---SGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQ 60
           ME  TD NP SG+  GEEDD   + E S++RSSLL+LQLSSNSSD +T KPR+FSCNYCQ
Sbjct: 1   MEPLTDRNPLSGD--GEEDDERETAELSDDRSSLLDLQLSSNSSD-ATTKPRVFSCNYCQ 60

Query: 61  RKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQI 120
           RKFFSSQALGGHQNAHKRERTLAKRVQ+FDW  AAIPLHGGAFDRR   SLG+HAHSQQI
Sbjct: 61  RKFFSSQALGGHQNAHKRERTLAKRVQRFDW-GAAIPLHGGAFDRR---SLGIHAHSQQI 120

Query: 121 QKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGT 180
           QKP  VG F G       SQLWPRP+FMGQQPAVGRLT ELGGRNFGR+DDVA W AIG+
Sbjct: 121 QKP--VGFFSGPGPT---SQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGS 180

Query: 181 SNAGN--NNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           SNAGN  +NN +IVHSQTKQ++DQ NFLDLSLKL
Sbjct: 181 SNAGNERSNNVSIVHSQTKQDQDQTNFLDLSLKL 202

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BLAST of CsaV3_4G036740 vs. NCBI nr
Match: XP_022936656.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 289.3 bits (739), Expect = 2.7e-74
Identity = 162/214 (75.70%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDDS---GEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQ 60
           ME  TD NP SG+  GEEDD     E S++RSSLL+LQLSSNSSD +T KPR+FSCNYCQ
Sbjct: 42  MEPLTDRNPLSGD--GEEDDEREPAELSDDRSSLLDLQLSSNSSD-ATTKPRVFSCNYCQ 101

Query: 61  RKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQI 120
           RKFFSSQALGGHQNAHKRERTLAKRVQ+FDW  AAIPLHGGAFDRR   SLG+HAHSQQI
Sbjct: 102 RKFFSSQALGGHQNAHKRERTLAKRVQRFDW-GAAIPLHGGAFDRR---SLGIHAHSQQI 161

Query: 121 QKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGT 180
           QKP  VG F G       SQLWPRP+FMGQQPAVGRLT ELGGRNFGR+DDVA W AIG+
Sbjct: 162 QKP--VGFFSGPGPT---SQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGS 221

Query: 181 SNAGN--NNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           SNAGN  +NN +IVHSQTKQ++DQ NFLDLSLKL
Sbjct: 222 SNAGNERSNNVSIVHSQTKQDQDQTNFLDLSLKL 243

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BLAST of CsaV3_4G036740 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.4e-18
Identity = 80/221 (36.20%), Postives = 110/221 (49.77%), Query Frame = 0


Query: 25  SEERSSLLELQLSSNSSDHSTNK------PRIFSCNYCQRKFFSSQALGGHQNAHKRERT 84
           S E + +   + SS+S+ H  ++      PR+FSCNYCQRKF+SSQALGGHQNAHKRERT
Sbjct: 36  SSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERT 95

Query: 85  LAKRVQKFDW---------------------AAAAIPLHGGAFDRRSSSSLGLHAHSQQI 144
           LAKR Q +                       + A++PLHG   +R   S+LG+ AHS  I
Sbjct: 96  LAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNR---STLGIQAHS-TI 155

Query: 145 QKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGT 204
            KP      F G    S S ++ + +   Q+P +G++  E                    
Sbjct: 156 HKPS-----FLGRQTTSLSHVFKQSIH--QKPTIGKMLPE----------------KFHL 215

Query: 205 SNAGNNNNS-------NIVHSQTKQEKDQNNF--LDLSLKL 210
             AGNNN++        I H ++ QE D N F  +DL+LKL
Sbjct: 216 EVAGNNNSNMVAAKLERIGHFKSNQE-DHNQFKKIDLTLKL 228

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BLAST of CsaV3_4G036740 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.9e-15
Identity = 74/199 (37.19%), Postives = 96/199 (48.24%), Query Frame = 0


Query: 39  NSSDHSTNKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAA------ 98
           N S  ST + ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR Q+   +A+A      
Sbjct: 50  NESTTSTEQ-KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYG 109

Query: 99  ---IPLHGGAFDRRSSSSLGLHAHSQQIQKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQP 158
              +P HG   + R   SLG+ AHS   +     G  FGG     G   W R  F  QQP
Sbjct: 110 FSPLPFHGQYNNHR---SLGIQAHSISHKLSSYNG--FGG---HYGQINWSRLPF-DQQP 169

Query: 159 AVGRLTAELGGRNFGRYDDVAEWTAIGTSNAGNN-----NNSNIVHSQTKQEK------- 210
           A+G+  +     NF  +       A   ++  NN     N   ++      E+       
Sbjct: 170 AIGKFPSM---DNFHHHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSPTLEQWHGDKGL 229

[Close]

BLAST of CsaV3_4G036740 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 3.9e-15
Identity = 55/116 (47.41%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 29  SSLLELQLSSNSSDHSTNK---------PRIFSCNYCQRKFFSSQALGGHQNAHKRERTL 88
           SS L L LSS S   +  +          R+FSCNYCQRKF+SSQALGGHQNAHKRERTL
Sbjct: 54  SSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 113

Query: 89  AKRVQKF-------------DWAAAA-------IPLHG-GAFDRRSSSSLGLHAHS 115
           AKR  +              ++AAAA       +PLHG G  +  S  +LG+ AHS
Sbjct: 114 AKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHS 169

[Close]

BLAST of CsaV3_4G036740 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-13
Identity = 51/106 (48.11%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 12  GELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTN---KPRIFSCNYCQRKFFSSQALGG 71
           GE +  +D S   S   S  L+L  + N    ST     PR+FSCNYC+RKF+SSQALGG
Sbjct: 17  GEASSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGG 76

Query: 72  HQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHS 115
           HQNAHKRERT+AKR             H       +SSSLG+ AHS
Sbjct: 77  HQNAHKRERTMAKRAMHMGRMFG----HHHRPYTYTSSSLGMQAHS 118

[Close]

BLAST of CsaV3_4G036740 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.6e-13
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 27 ERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR 83
          E SS+     SS +S     +PR+FSCNYCQRKF+SSQALGGHQNAHK ERTLAK+
Sbjct: 28 EPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83

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BLAST of CsaV3_4G036740 vs. ExPASy TrEMBL
Match: A0A0A0L4C3 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652110 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKF 60
           MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKF
Sbjct: 1   MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKP 120
           FSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKP
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKP 120

Query: 121 PTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGTSNA 180
           PTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRL AELGGRNFGRYDDVAEWTAIGTSNA
Sbjct: 121 PTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLPAELGGRNFGRYDDVAEWTAIGTSNA 180

Query: 181 GNNNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           GNNNNSNIVHSQTKQEKDQNNFLDLSLKL
Sbjct: 181 GNNNNSNIVHSQTKQEKDQNNFLDLSLKL 209

[Close]

BLAST of CsaV3_4G036740 vs. ExPASy TrEMBL
Match: A0A5A7VC97 (Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003190 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.7e-96
Identity = 191/215 (88.84%), Postives = 194/215 (90.23%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKF 60
           MESHTDGNPFSGE  GEEDD  EFSEERSSLLELQLSSN+S  STNKPRIFSCNYCQRKF
Sbjct: 1   MESHTDGNPFSGE--GEEDDEKEFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKP 120
           FSSQALGGHQNAHKRERTLAKRVQKFDW AAAIPLHGGAFDRR  SSLGLHAHSQQIQKP
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQKFDW-AAAIPLHGGAFDRR--SSLGLHAHSQQIQKP 120

Query: 121 PTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGTSNA 180
           P VGLFFGGA   SGSQLWPRPMFMGQQPAVGRL AELGGRNFGRYDDVAEWTAIGTSNA
Sbjct: 121 PAVGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNA 180

Query: 181 G------NNNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           G      NNNNSNIVHSQT+Q+KDQ NFLDLSLKL
Sbjct: 181 GNESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

[Close]

BLAST of CsaV3_4G036740 vs. ExPASy TrEMBL
Match: A0A1S3BVD7 (zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.7e-96
Identity = 191/215 (88.84%), Postives = 194/215 (90.23%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQRKF 60
           MESHTDGNPFSGE  GEEDD  EFSEERSSLLELQLSSN+S  STNKPRIFSCNYCQRKF
Sbjct: 1   MESHTDGNPFSGE--GEEDDEKEFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQIQKP 120
           FSSQALGGHQNAHKRERTLAKRVQKFDW AAAIPLHGGAFDRR  SSLGLHAHSQQIQKP
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQKFDW-AAAIPLHGGAFDRR--SSLGLHAHSQQIQKP 120

Query: 121 PTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGTSNA 180
           P VGLFFGGA   SGSQLWPRPMFMGQQPAVGRL AELGGRNFGRYDDVAEWTAIGTSNA
Sbjct: 121 PAVGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNA 180

Query: 181 G------NNNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           G      NNNNSNIVHSQT+Q+KDQ NFLDLSLKL
Sbjct: 181 GNESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

[Close]

BLAST of CsaV3_4G036740 vs. ExPASy TrEMBL
Match: A0A6J1F839 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 162/214 (75.70%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDDS---GEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQ 60
           ME  TD NP SG+  GEEDD     E S++RSSLL+LQLSSNSSD +T KPR+FSCNYCQ
Sbjct: 42  MEPLTDRNPLSGD--GEEDDEREPAELSDDRSSLLDLQLSSNSSD-ATTKPRVFSCNYCQ 101

Query: 61  RKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQI 120
           RKFFSSQALGGHQNAHKRERTLAKRVQ+FDW  AAIPLHGGAFDRR   SLG+HAHSQQI
Sbjct: 102 RKFFSSQALGGHQNAHKRERTLAKRVQRFDW-GAAIPLHGGAFDRR---SLGIHAHSQQI 161

Query: 121 QKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGT 180
           QKP  VG F G       SQLWPRP+FMGQQPAVGRLT ELGGRNFGR+DDVA W AIG+
Sbjct: 162 QKP--VGFFSGPGPT---SQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGS 221

Query: 181 SNAGN--NNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           SNAGN  +NN +IVHSQTKQ++DQ NFLDLSLKL
Sbjct: 222 SNAGNERSNNVSIVHSQTKQDQDQTNFLDLSLKL 243

[Close]

BLAST of CsaV3_4G036740 vs. ExPASy TrEMBL
Match: A0A6J1IG94 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 161/214 (75.23%), Postives = 176/214 (82.24%), Query Frame = 0


Query: 1   MESHTDGNPFSGELAGEEDDS---GEFSEERSSLLELQLSSNSSDHSTNKPRIFSCNYCQ 60
           ME  TD NP SG+  GEEDD     E S++RSSLL+LQLSSNSSD +T KPR+FSCNYCQ
Sbjct: 41  MEPLTDRNPLSGD--GEEDDDREPAELSDDRSSLLDLQLSSNSSD-ATTKPRVFSCNYCQ 100

Query: 61  RKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHSQQI 120
           RKFFSSQALGGHQNAHKRERTLAKRVQ+FDW  AAIPLHGGAFDRR   SLG+HAHSQQI
Sbjct: 101 RKFFSSQALGGHQNAHKRERTLAKRVQRFDW-GAAIPLHGGAFDRR---SLGIHAHSQQI 160

Query: 121 QKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGT 180
           QKP  VG F G       SQLWPR +FMGQQPAVGRLT ELGGRNFGR+DDVA W AIG+
Sbjct: 161 QKP--VGFFSGPGPT---SQLWPRTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGS 220

Query: 181 SNAGN--NNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           SNAGN  +NN +IVHSQTKQ++DQ NFLDLSLKL
Sbjct: 221 SNAGNERSNNVSIVHSQTKQDQDQTNFLDLSLKL 242

[Close]

BLAST of CsaV3_4G036740 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 92.0 bits (227), Expect = 5.9e-19
Identity = 80/221 (36.20%), Postives = 110/221 (49.77%), Query Frame = 0


Query: 25  SEERSSLLELQLSSNSSDHSTNK------PRIFSCNYCQRKFFSSQALGGHQNAHKRERT 84
           S E + +   + SS+S+ H  ++      PR+FSCNYCQRKF+SSQALGGHQNAHKRERT
Sbjct: 36  SSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERT 95

Query: 85  LAKRVQKFDW---------------------AAAAIPLHGGAFDRRSSSSLGLHAHSQQI 144
           LAKR Q +                       + A++PLHG   +R   S+LG+ AHS  I
Sbjct: 96  LAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNR---STLGIQAHS-TI 155

Query: 145 QKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGGRNFGRYDDVAEWTAIGT 204
            KP      F G    S S ++ + +   Q+P +G++  E                    
Sbjct: 156 HKPS-----FLGRQTTSLSHVFKQSIH--QKPTIGKMLPE----------------KFHL 215

Query: 205 SNAGNNNNS-------NIVHSQTKQEKDQNNF--LDLSLKL 210
             AGNNN++        I H ++ QE D N F  +DL+LKL
Sbjct: 216 EVAGNNNSNMVAAKLERIGHFKSNQE-DHNQFKKIDLTLKL 228

[Close]

BLAST of CsaV3_4G036740 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-18
Identity = 81/223 (36.32%), Postives = 113/223 (50.67%), Query Frame = 0


Query: 14  LAGEEDDSGEFSEERSSL--LELQLSSNSSDHSTN-KPRIFSCNYCQRKFFSSQALGGHQ 73
           LAG +    + ++E + L  LE  + + S + ST+ + ++FSCNYCQR F+SSQALGGHQ
Sbjct: 64  LAGYDSSQPQLNQELNLLDCLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQ 123

Query: 74  NAHKRERTLAKRVQKFDWAA--------AAIPLHGGAFDRRSSSSLGLHAHSQQIQKPPT 133
           NAHKRERTLAKR Q+   AA        A +P HG    + S+ +LG+ AHS    KP +
Sbjct: 124 NAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFHG----QYSNRTLGIQAHSMS-HKPSS 183

Query: 134 VGLFFGGAAAPSGSQLWPRPMFMGQQPAVGRLTAELGG----------------RNFGRY 193
             ++ G      G   W R + + QQPA+ +LT+                     N GR+
Sbjct: 184 YNVYGG----EYGQINWSR-IPLVQQPAIAKLTSTENHYNHHQMMIAPPLTSTCENIGRF 243

Query: 194 DDVAEWTAIGTSNAGNNNNSNIVHSQTKQEKDQNNFLDLSLKL 210
           D         TS         +     ++EK +N  LDLSLKL
Sbjct: 244 DVGRIPVEFPTSELWQRGEELL--KPAEEEKQKN--LDLSLKL 272

[Close]

BLAST of CsaV3_4G036740 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-16
Identity = 55/116 (47.41%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 29  SSLLELQLSSNSSDHSTNK---------PRIFSCNYCQRKFFSSQALGGHQNAHKRERTL 88
           SS L L LSS S   +  +          R+FSCNYCQRKF+SSQALGGHQNAHKRERTL
Sbjct: 54  SSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 113

Query: 89  AKRVQKF-------------DWAAAA-------IPLHG-GAFDRRSSSSLGLHAHS 115
           AKR  +              ++AAAA       +PLHG G  +  S  +LG+ AHS
Sbjct: 114 AKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHS 169

[Close]

BLAST of CsaV3_4G036740 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-16
Identity = 74/199 (37.19%), Postives = 96/199 (48.24%), Query Frame = 0


Query: 39  NSSDHSTNKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQKFDWAAAA------ 98
           N S  ST + ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR Q+   +A+A      
Sbjct: 50  NESTTSTEQ-KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYG 109

Query: 99  ---IPLHGGAFDRRSSSSLGLHAHSQQIQKPPTVGLFFGGAAAPSGSQLWPRPMFMGQQP 158
              +P HG   + R   SLG+ AHS   +     G  FGG     G   W R  F  QQP
Sbjct: 110 FSPLPFHGQYNNHR---SLGIQAHSISHKLSSYNG--FGG---HYGQINWSRLPF-DQQP 169

Query: 159 AVGRLTAELGGRNFGRYDDVAEWTAIGTSNAGNN-----NNSNIVHSQTKQEK------- 210
           A+G+  +     NF  +       A   ++  NN     N   ++      E+       
Sbjct: 170 AIGKFPSM---DNFHHHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSPTLEQWHGDKGL 229

[Close]

BLAST of CsaV3_4G036740 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 51/106 (48.11%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 12  GELAGEEDDSGEFSEERSSLLELQLSSNSSDHSTN---KPRIFSCNYCQRKFFSSQALGG 71
           GE +  +D S   S   S  L+L  + N    ST     PR+FSCNYC+RKF+SSQALGG
Sbjct: 17  GEASSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGG 76

Query: 72  HQNAHKRERTLAKRVQKFDWAAAAIPLHGGAFDRRSSSSLGLHAHS 115
           HQNAHKRERT+AKR             H       +SSSLG+ AHS
Sbjct: 77  HQNAHKRERTMAKRAMHMGRMFG----HHHRPYTYTSSSLGMQAHS 118

The following BLAST results are available for this feature:

BLAST of CsaV3_4G036740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654418.2	5.1e-113	100.00	zinc finger protein 1 [Cucumis sativus] >KAE8649945.1 hypothetical protein Csa_0...	[more]
XP_008453080.1	5.6e-96	88.84	PREDICTED: zinc finger protein 1-like [Cucumis melo] >KAA0064597.1 zinc finger p...	[more]
XP_038899458.1	1.7e-84	81.65	zinc finger protein 1-like [Benincasa hispida]	[more]
KAG7024430.1	2.1e-74	75.70	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022936656.1	2.7e-74	75.70	zinc finger protein 1-like [Cucurbita moschata]	[more]

BLAST of CsaV3_4G036740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	8.4e-18	36.20	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	3.9e-15	37.19	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39263	3.9e-15	47.41	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	1.6e-13	48.11	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	3.6e-13	66.07	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of CsaV3_4G036740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4C3	1.2e-112	99.52	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652110 P...	[more]
A0A5A7VC97	2.7e-96	88.84	Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BVD7	2.7e-96	88.84	zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1	[more]
A0A6J1F839	1.3e-74	75.70	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV...	[more]
A0A6J1IG94	1.1e-73	75.23	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1	[more]

BLAST of CsaV3_4G036740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80730.1	5.9e-19	36.20	zinc-finger protein 1	[more]
AT5G10970.1	6.6e-18	36.32	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G66140.1	2.8e-16	47.41	zinc finger protein 4	[more]
AT5G25160.1	2.8e-16	37.19	zinc finger protein 3	[more]
AT1G24625.1	1.2e-14	48.11	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 25..91 e-value: 8.8E-7 score: 30.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..201
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 25..209
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 53..73
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 51..78 score: 11.343733
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 48..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G036740.1	CsaV3_4G036740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway