CsaV3_4G035620 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G035620
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 25070405 .. 25070916 (-)
RNA-Seq ExpressionCsaV3_4G035620
SyntenyCsaV3_4G035620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGTTTGGTATTACATGATAGTAAATTTGACCCAATTGCAGGGTGCTTTGGAAGAAACCAAATCTTGGGGTGGCGAACATCAACAGCTTGTCCAACTTCGTGGCTATAAACTCCCAAGTTTTGGTTGGTTGCCTACTTGCTTTCCATGGCTTTTCTGTTAATATTTAATCTATTTGAATTAGAAACATGGGTTGTGTTCACATTCATACCTTTCGTTGAAATCTTATCTATGGTGGGCTTAATCAAACCACAACTCTTTCAAACATAATTCCAATATTATTAGTGTCATGTTAGCTTAAGACACATTATACACTACACGAAATCAGAATGGTTGGCTATGCTTAAATATTGAGATTTGGTTCACCTACTTTTACTGACAATTTAGCTTCATCTGCAATGATTTAAATCTCATCATATGTTCATGGATTTTCCAGGCCCAACATCAGCACACAGCTCACGATCCCTACCGTATACGACTCTCATAATTGTTCATGAGACTGATGTTTAA

mRNA sequence

ATGCATGTTTGGTATTACATGATAGTAAATTTGACCCAATTGCAGGGTGCTTTGGAAGAAACCAAATCTTGGGGTGGCGAACATCAACAGCTTGTCCAACTTCGTGGCTATAAACTCCCAAGTTTTGGCCCAACATCAGCACACAGCTCACGATCCCTACCGTATACGACTCTCATAATTGTTCATGAGACTGATGTTTAA

Coding sequence (CDS)

ATGCATGTTTGGTATTACATGATAGTAAATTTGACCCAATTGCAGGGTGCTTTGGAAGAAACCAAATCTTGGGGTGGCGAACATCAACAGCTTGTCCAACTTCGTGGCTATAAACTCCCAAGTTTTGGCCCAACATCAGCACACAGCTCACGATCCCTACCGTATACGACTCTCATAATTGTTCATGAGACTGATGTTTAA

Protein sequence

MHVWYYMIVNLTQLQGALEETKSWGGEHQQLVQLRGYKLPSFGPTSAHSSRSLPYTTLIIVHETDV*
Homology
[Close]
BLAST of CsaV3_4G035620 vs. NCBI nr
Match: KGN55329.1 (hypothetical protein Csa_012938 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 5.0e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MHVWYYMIVNLTQLQGALEETKSWGGEHQQLVQLRGYKLPSFGPTSAHSSRSLPYTTLII 60
          MHVWYYMIVNLTQLQGALEETKSWGGEHQQLVQLRGYKLPSFGPTSAHSSRSLPYTTLII
Sbjct: 1  MHVWYYMIVNLTQLQGALEETKSWGGEHQQLVQLRGYKLPSFGPTSAHSSRSLPYTTLII 60

Query: 61 VHETDV 67
          VHETDV
Sbjct: 61 VHETDV 66

[Close]
BLAST of CsaV3_4G035620 vs. ExPASy TrEMBL
Match: A0A0A0L2R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646030 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.4e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MHVWYYMIVNLTQLQGALEETKSWGGEHQQLVQLRGYKLPSFGPTSAHSSRSLPYTTLII 60
          MHVWYYMIVNLTQLQGALEETKSWGGEHQQLVQLRGYKLPSFGPTSAHSSRSLPYTTLII
Sbjct: 1  MHVWYYMIVNLTQLQGALEETKSWGGEHQQLVQLRGYKLPSFGPTSAHSSRSLPYTTLII 60

Query: 61 VHETDV 67
          VHETDV
Sbjct: 61 VHETDV 66

The following BLAST results are available for this feature:
BLAST of CsaV3_4G035620 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55329.15.0e-30100.00hypothetical protein Csa_012938 [Cucumis sativus][more]
BLAST of CsaV3_4G035620 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G035620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2R02.4e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646030 PE=4 SV=1[more]
BLAST of CsaV3_4G035620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G035620.1CsaV3_4G035620.1mRNA