CsaV3_4G035340 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G035340
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	DNA binding
Location	chr4: 24904005 .. 24906654 (-)
RNA-Seq Expression	CsaV3_4G035340
Synteny	CsaV3_4G035340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAGTTTTCAATCTCCGATCCAACTCTCTGGAGAGAAGCTCTCTCTACTTATTCATCTCAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTTCCTCTTATTCTCCACAAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGTGCTCAGTGCTCTGTATCACATTCTTTTCATTTAGGTTTCGATGATTATTTATCAATTTTATCTACAACGATTTTACGAATTTCAGGCCTCGTCTCTTGGATTTTGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTTTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGTGAAATCATGATGTATATTTATGCAATCATTATCCGTAGCCATTGATTTCTGCAAAAAGTTTTGAATATCTGTTATGCCTAGATTTCTAACTTATAGTGGTGAAGAAATAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTACTATTCGCAAATAAATTGGAACAAAAAGCCAAGGTCTGTCAGCTTTTTCCATTTCCATCCTTTCAACCTTCATGCGCCAATTTCATTATTTTTTTACATTGACATTGCTGACTTTCTTACTAGCTTCGCTCTGCAAAGGTCTGTTTCTCAAAGCCATGATCGATATGGTTTAGCATTCTAGAATTGAACTGTTGTTTCAAACTTTGAGTGTATTGTATACAAGCATATGCTATAATAAATATAGTCTTGTGTGACTCGTGCTTCATTTGTGAATGTACAATATGTAAAGATCTGCATTTAGTATATTTTCTCGATTTATATATATGGGTTTGTGTATCTTGTGAGATTAACAACCTTGGAACGTGGAATAAAAATGAAGGCGTGAGTTAAACACAAGCTTGATTTCTGCATCTTAGACTAAGCTTAACTTAAAGTCAAACATTCTAATTGTTCAAGGAAGTGGTTACAAATTTTTTCTGTTTGTTGGACTGTTTTGAAACTGTTCCAACGCTCCGAAAGACGAAGTAGGGGTCTCACTATTTGAAGTATCTATTATAGCTAATACATTATTAGTGAATCACGGAAATCTGGATGTTGATTCACTGTTGTTTTACACTTTTTTTTAGTTATTTCTTGACATTGTTCTTTATGGGAGATGGTCATTTGCAGGAATTAAGCTTAGAAGGAGAAATTTTCACACCATCTGATGTAGAGAGGGCTTTGTGGAGTAGGGCTATAGGGGAAAAATTGAAAGGTTCAAAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGACATCCACTACCAATGGCTTTTGAGTTTTGTACTTCTGGTTTTGGACATGCAGCTGATGTTGGCCTTTCAGGTTTATTCATTACTGCAACAATCTAGCTTCTATTCCTTAACTTACAATGTAAAATTGCAAATACTCCCTTGAAGATCATGTTTGATGGTATCTAATTGAAACTTTCACCCTATGTCCTTTGTTTTTTTTTTTCTTTTTTCTTTTTGGAGATCACTTTCCTAGTTTGAAAATATTTTACAAACGGTTTTGTAATTTCAGCATTATTTGGGTTTTTTTTGTGTGCATTTTGTACCTTTTGTCCAGTCATTTATTTTTCTTTTAGAAAAAGTGGTCGACTAAAAGTCTAAAAATCACTTTCGAATAAATATTGTAGAACTACATTCAAACATATTATTATTAAGAAAATGATCATCAACCTACTAATTATTTCACGGTCGTGAGTAGCCAAATATTGAAACTATTTATAAAATATACCAAAAGAAAAAGAGTCTAATGAATTTTACTTTCTAAATAATTTGAGTGTTTTTCTATTTTAGAAATGTTCAGTTTGTTTTTTATTTCATTTTTAAACAATTTGTCATTCATACTTATTCATAAAGTTATTCTAAATGTACATCTAGGTTTGCTAATTATAATCTTAATATGTTAAGGAACAACTTAATATAAGTAAAGTGTTACAATCATATTTGCACCTTTCTTAGTACTATAATTGTGAACGAAAATTAAAGATCACAAACGAAAAGAAACTAAAAAATCCCCAACTTACCCAAAAAAAAAAAAGAGTGTACTTTATTTGGCCCAAAAAACAAGCCCAAAGGCAGATTAAGTAGGTAGATATCGTGTCTTGCCTTGATTCGGTTTTCTCTTGGACTGGGTAACAGGTATGTGACGTTAAAGTTCCCCGTCTAGGCTTTGGCGAAATGGTTCGGCAGACCTATAACGTACAAGAGAAAACCGTTGAATGGAAGCCAAGGCTGCAGGACCCACTTGCATTCAACTTGTACAAGTGGGTACACCTCATTGGCTCCTCCACCTACAACCCGGACGCCACGTCGGTTCCCGCGTTACTCCTCTATAATAGTTATTTTTCTAACACAAGACCACCGGCAACGGCATATTTTCCTTCGCCGCGACCCGCCTAA

mRNA sequence

ATGATGGAGTTTTCAATCTCCGATCCAACTCTCTGGAGAGAAGCTCTCTCTACTTATTCATCTCAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTTCCTCTTATTCTCCACAAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGCCTCGTCTCTTGGATTTTGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTTTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTACTATTCGCAAATAAATTGGAACAAAAAGCCAAGCTGATGTTGGCCTTTCAGGTATGTGACGTTAAAGTTCCCCGTCTAGGCTTTGGCGAAATGGTTCGGCAGACCTATAACGTACAAGAGAAAACCGTTGAATGGAAGCCAAGGCTGCAGGACCCACTTGCATTCAACTTGTACAAGTGGGTACACCTCATTGGCTCCTCCACCTACAACCCGGACGCCACGTCGGTTCCCGCGTTACTCCTCTATAATAGTTATTTTTCTAACACAAGACCACCGGCAACGGCATATTTTCCTTCGCCGCGACCCGCCTAA

Coding sequence (CDS)

ATGATGGAGTTTTCAATCTCCGATCCAACTCTCTGGAGAGAAGCTCTCTCTACTTATTCATCTCAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTTCCTCTTATTCTCCACAAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGCCTCGTCTCTTGGATTTTGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTTTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTACTATTCGCAAATAAATTGGAACAAAAAGCCAAGCTGATGTTGGCCTTTCAGGTATGTGACGTTAAAGTTCCCCGTCTAGGCTTTGGCGAAATGGTTCGGCAGACCTATAACGTACAAGAGAAAACCGTTGAATGGAAGCCAAGGCTGCAGGACCCACTTGCATTCAACTTGTACAAGTGGGTACACCTCATTGGCTCCTCCACCTACAACCCGGACGCCACGTCGGTTCCCGCGTTACTCCTCTATAATAGTTATTTTTCTAACACAAGACCACCGGCAACGGCATATTTTCCTTCGCCGCGACCCGCCTAA

Protein sequence

MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKLMLAFQVCDVKVPRLGFGEMVRQTYNVQEKTVEWKPRLQDPLAFNLYKWVHLIGSSTYNPDATSVPALLLYNSYFSNTRPPATAYFPSPRPA*

Homology

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BLAST of CsaV3_4G035340 vs. NCBI nr
Match: KAE8649898.1 (hypothetical protein Csa_012324 [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 9.0e-144
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL
Sbjct: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKLMLAFQVCDVKV 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKLMLAFQVCDVKV
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKLMLAFQVCDVKV 180

Query: 181 PRLGFGEMVRQTYNVQEKTVEWKPRLQDPLAFNLYKWVHLIGSSTYNPDATSVPALLLYN 240
           PRLGFGEMVRQTYNVQEKTVEWKPRLQDPLAFNLYKWVHLIGSSTYNPDATSVPALLLYN
Sbjct: 181 PRLGFGEMVRQTYNVQEKTVEWKPRLQDPLAFNLYKWVHLIGSSTYNPDATSVPALLLYN 240

Query: 241 SYFSNTRPPATAYFPSPRPA 261
           SYFSNTRPPATAYFPSPRPA
Sbjct: 241 SYFSNTRPPATAYFPSPRPA 260

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BLAST of CsaV3_4G035340 vs. NCBI nr
Match: TYK20114.1 (hypothetical protein E5676_scaffold134G002390 [Cucumis melo var. makuwa])

HSP 1 Score: 467.6 bits (1202), Expect = 6.9e-128
Identity = 235/259 (90.73%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKLMLAFQVCDVKVP 181
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAK      VC  K+P
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAK------VCHAKLP 180

Query: 182 RLGFGEMVRQTYNVQEKTVEWKPRLQDPLAFNLYKWVHLIGSSTYNPDATSVPALLLYNS 241
           RL FGEMVRQTYNVQ+KTVEWKPRLQDPLAFNLYKW  LIGSSTYNPDATSVPAL L+NS
Sbjct: 181 RLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYNPDATSVPALFLFNS 240

Query: 242 YFSNTRPPATAYFPSPRPA 261
           YFSNT+ PATAYFPSPRPA
Sbjct: 241 YFSNTKAPATAYFPSPRPA 253

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BLAST of CsaV3_4G035340 vs. NCBI nr
Match: XP_004141302.1 (uncharacterized protein LOC101204707 [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 2.3e-86
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL
Sbjct: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 169
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 168

[Close]

BLAST of CsaV3_4G035340 vs. NCBI nr
Match: XP_008452684.1 (PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 1.2e-82
Identity = 160/167 (95.81%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 169
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAK
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAK 167

[Close]

BLAST of CsaV3_4G035340 vs. NCBI nr
Match: KAA0064474.1 (hypothetical protein E6C27_scaffold255G001890 [Cucumis melo var. makuwa])

HSP 1 Score: 317.4 bits (812), Expect = 1.2e-82
Identity = 160/167 (95.81%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 169
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAK
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAK 167

[Close]

BLAST of CsaV3_4G035340 vs. ExPASy TrEMBL
Match: A0A5D3D9C6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002390 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.4e-128
Identity = 235/259 (90.73%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKLMLAFQVCDVKVP 181
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAK      VC  K+P
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAK------VCHAKLP 180

Query: 182 RLGFGEMVRQTYNVQEKTVEWKPRLQDPLAFNLYKWVHLIGSSTYNPDATSVPALLLYNS 241
           RL FGEMVRQTYNVQ+KTVEWKPRLQDPLAFNLYKW  LIGSSTYNPDATSVPAL L+NS
Sbjct: 181 RLAFGEMVRQTYNVQKKTVEWKPRLQDPLAFNLYKWGCLIGSSTYNPDATSVPALFLFNS 240

Query: 242 YFSNTRPPATAYFPSPRPA 261
           YFSNT+ PATAYFPSPRPA
Sbjct: 241 YFSNTKAPATAYFPSPRPA 253

[Close]

BLAST of CsaV3_4G035340 vs. ExPASy TrEMBL
Match: A0A0A0L3W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645280 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.1e-86
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL
Sbjct: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 169
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 168

[Close]

BLAST of CsaV3_4G035340 vs. ExPASy TrEMBL
Match: A0A5A7VB62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001890 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.6e-83
Identity = 160/167 (95.81%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 169
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAK
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAK 167

[Close]

BLAST of CsaV3_4G035340 vs. ExPASy TrEMBL
Match: A0A1S3BUF7 (uncharacterized protein LOC103493629 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493629 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.6e-83
Identity = 160/167 (95.81%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 169
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAK
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAK 167

[Close]

BLAST of CsaV3_4G035340 vs. ExPASy TrEMBL
Match: A0A6J1ILC1 (uncharacterized protein LOC111477273 OS=Cucurbita maxima OX=3661 GN=LOC111477273 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 8.4e-79
Identity = 154/168 (91.67%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           M+EF+ SDP LW EALS+Y SQIEALGKPNLVSLDDFYRNELP +LHKRNPSPYITTSEL
Sbjct: 1   MVEFAHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRL DFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLFDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 169
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FA KL+ KAK
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLTFAKKLQDKAK 168

[Close]

BLAST of CsaV3_4G035340 vs. TAIR 10
Match: AT3G12210.2 (DNA binding )

HSP 1 Score: 257.3 bits (656), Expect = 1.3e-68
Identity = 128/167 (76.65%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           +EF  SD  +W+EALS+Y S+IE+L KP LVSLD FYR +LP +LH R+P+PY+TTSELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAK 169
           SAVLAAYAPD+APFMSDEAME ALGNSKDYSLKQYLLFA KL+ KAK
Sbjct: 123 SAVLAAYAPDIAPFMSDEAMEVALGNSKDYSLKQYLLFATKLQDKAK 169

[Close]

BLAST of CsaV3_4G035340 vs. TAIR 10
Match: AT3G12210.1 (DNA binding )

HSP 1 Score: 210.7 bits (535), Expect = 1.4e-54
Identity = 103/138 (74.64%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           +EF  SD  +W+EALS+Y S+IE+L KP LVSLD FYR +LP +LH R+P+PY+TTSELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 122 SAVLAAYAPDVAPFMSDE 140
           SAVLAAYAPD+APFMSDE
Sbjct: 123 SAVLAAYAPDIAPFMSDE 140

The following BLAST results are available for this feature:

BLAST of CsaV3_4G035340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649898.1	9.0e-144	100.00	hypothetical protein Csa_012324 [Cucumis sativus]	[more]
TYK20114.1	6.9e-128	90.73	hypothetical protein E5676_scaffold134G002390 [Cucumis melo var. makuwa]	[more]
XP_004141302.1	2.3e-86	100.00	uncharacterized protein LOC101204707 [Cucumis sativus]	[more]
XP_008452684.1	1.2e-82	95.81	PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo]	[more]
KAA0064474.1	1.2e-82	95.81	hypothetical protein E6C27_scaffold255G001890 [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_4G035340 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G035340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D9C6	3.4e-128	90.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L3W6	1.1e-86	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645280 PE=4 SV=1	[more]
A0A5A7VB62	5.6e-83	95.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BUF7	5.6e-83	95.81	uncharacterized protein LOC103493629 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1ILC1	8.4e-79	91.67	uncharacterized protein LOC111477273 OS=Cucurbita maxima OX=3661 GN=LOC111477273...	[more]

BLAST of CsaV3_4G035340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12210.2	1.3e-68	76.65	DNA binding	[more]
AT3G12210.1	1.4e-54	74.64	DNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21521	UNCHARACTERIZED	coord: 2..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G035340.1	CsaV3_4G035340.1	mRNA