Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAACGAAATAGGCATAAGAGTCAAGAAAGGGAGAGTGTGAACTCAGAAGGAGGAATCGCCGCTTGGAATGTGTTTGACAGTGTGAAGACCACAACGAAGACTCCTGAAGCTCTAATGGGGGAGATCGGTGCTGCAATTTCAAATTTAGAATATGCTCGAACCACTGCGTATTTAGAATCTCCAATATCTCCCGATGAGCCAGAGGATGAGGAACCTAGTGCGAATTCAAGAAGTCAGTATGATGTTCGAATGGCGGATGGAGCTTACAAGGCAGGTTGTAAAGCATTAACCGTTGGTAAGCTTGACGAGGCTCTTCATTCGTTGAATGTTTCTCTTTCGAAATGCCCACCTGAGAAATCATCTGCTGTTGCTAAGATTCAATCTTTGATCTCCCTCACGTCTCAGCAACTTCAGATCAGATCTTCTAATTGCCAAGAAATTTCAGAAGATTGA
mRNA sequence
ATGCCTCAACGAAATAGGCATAAGAGTCAAGAAAGGGAGAGTGTGAACTCAGAAGGAGGAATCGCCGCTTGGAATGTGTTTGACAGTGTGAAGACCACAACGAAGACTCCTGAAGCTCTAATGGGGGAGATCGGTGCTGCAATTTCAAATTTAGAATATGCTCGAACCACTGCGTATTTAGAATCTCCAATATCTCCCGATGAGCCAGAGGATGAGGAACCTAGTGCGAATTCAAGAAGTCAGTATGATGTTCGAATGGCGGATGGAGCTTACAAGGCAGGTTGTAAAGCATTAACCGTTGGTAAGCTTGACGAGGCTCTTCATTCGTTGAATGTTTCTCTTTCGAAATGCCCACCTGAGAAATCATCTGCTGTTGCTAAGATTCAATCTTTGATCTCCCTCACGTCTCAGCAACTTCAGATCAGATCTTCTAATTGCCAAGAAATTTCAGAAGATTGA
Coding sequence (CDS)
ATGCCTCAACGAAATAGGCATAAGAGTCAAGAAAGGGAGAGTGTGAACTCAGAAGGAGGAATCGCCGCTTGGAATGTGTTTGACAGTGTGAAGACCACAACGAAGACTCCTGAAGCTCTAATGGGGGAGATCGGTGCTGCAATTTCAAATTTAGAATATGCTCGAACCACTGCGTATTTAGAATCTCCAATATCTCCCGATGAGCCAGAGGATGAGGAACCTAGTGCGAATTCAAGAAGTCAGTATGATGTTCGAATGGCGGATGGAGCTTACAAGGCAGGTTGTAAAGCATTAACCGTTGGTAAGCTTGACGAGGCTCTTCATTCGTTGAATGTTTCTCTTTCGAAATGCCCACCTGAGAAATCATCTGCTGTTGCTAAGATTCAATCTTTGATCTCCCTCACGTCTCAGCAACTTCAGATCAGATCTTCTAATTGCCAAGAAATTTCAGAAGATTGA
Protein sequence
MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYLESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPEKSSAVAKIQSLISLTSQQLQIRSSNCQEISED*
Homology
BLAST of CsaV3_4G034180 vs. NCBI nr
Match:
XP_011654103.1 (uncharacterized protein LOC101212714 [Cucumis sativus] >KGN55178.1 hypothetical protein Csa_012701 [Cucumis sativus])
HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL
Sbjct: 1 MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
Query: 61 ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
KSSAVAKIQSLISLTSQQLQIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
BLAST of CsaV3_4G034180 vs. NCBI nr
Match:
XP_008452533.1 (PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo] >KAA0064371.1 uncharacterized protein E6C27_scaffold255G00720 [Cucumis melo var. makuwa] >TYK20216.1 uncharacterized protein E5676_scaffold134G003530 [Cucumis melo var. makuwa])
HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64
Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0
Query: 1 MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
M QRN HKSQ RESVNSEGGI WNVFD+VKTTTKTPEALM EI AAISNLEY RT AYL
Sbjct: 1 MHQRNWHKSQGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAYL 60
Query: 61 ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
ESPIS PEDEEPSANSRSQYDVR+ADGAYKAGCKALT+GKLDEALHSLNVSLSKCPPE
Sbjct: 61 ESPIS---PEDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
KSSAVAKIQSLISLTSQQ+QIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQIQIRSSNCQEISED 149
BLAST of CsaV3_4G034180 vs. NCBI nr
Match:
XP_038899466.1 (uncharacterized protein LOC120086752 [Benincasa hispida] >XP_038899467.1 uncharacterized protein LOC120086752 [Benincasa hispida])
HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 123/153 (80.39%), Postives = 135/153 (88.24%), Query Frame = 0
Query: 1 MPQRNRHKS-QERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
MPQR+ HK+ +E E++NS GIAAWNVFD+VKTTTKTPEALM EI AAISN EYARTTA
Sbjct: 1 MPQRDWHKNLKEGENMNSGEGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAC 60
Query: 61 LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
L+SPISPD+ ED E SA+ R+QY VRMADG+YKAGC A TVGKLDEALHSLNVSLSKCPP
Sbjct: 61 LQSPISPDDSEDGESSASLRTQYVVRMADGSYKAGCAAPTVGKLDEALHSLNVSLSKCPP 120
Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
EKSSAVAK+QSLISLTS QLQIRSSN QEISED
Sbjct: 121 EKSSAVAKLQSLISLTSHQLQIRSSNSQEISED 153
BLAST of CsaV3_4G034180 vs. NCBI nr
Match:
KAG6608487.1 (hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 0
Query: 1 MPQRNRHKSQE-RESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI AI+NLEYAR+TA+
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
LESPISP P+D A+S +QYD R+AD AYKAGC AL VGKLDEALHSLNVSLSKCPP
Sbjct: 61 LESPISP-TPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120
Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
EKSSAVAK+QSLISLTSQQLQIRSSNC EISED
Sbjct: 121 EKSSAVAKLQSLISLTSQQLQIRSSNCHEISED 152
BLAST of CsaV3_4G034180 vs. NCBI nr
Match:
XP_022940904.1 (uncharacterized protein LOC111446352 [Cucurbita moschata])
HSP 1 Score: 217.2 bits (552), Expect = 9.6e-53
Identity = 115/153 (75.16%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 1 MPQRNRHKSQE-RESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI AI+NLEYAR+TA+
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
LESPISP P+D +S +QYD R+AD AYKAGC AL VGKLDEALHSLNVSLSKCPP
Sbjct: 61 LESPISP-TPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120
Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
EKSSAVAK+QSLISLTS+QLQIRSSNC EISED
Sbjct: 121 EKSSAVAKLQSLISLTSKQLQIRSSNCHEISED 152
BLAST of CsaV3_4G034180 vs. ExPASy TrEMBL
Match:
A0A0A0L090 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639170 PE=4 SV=1)
HSP 1 Score: 293.1 bits (749), Expect = 6.6e-76
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL
Sbjct: 1 MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
Query: 61 ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE
Sbjct: 61 ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
KSSAVAKIQSLISLTSQQLQIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 152
BLAST of CsaV3_4G034180 vs. ExPASy TrEMBL
Match:
A0A5A7VF87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003530 PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 6.9e-65
Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0
Query: 1 MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
M QRN HKSQ RESVNSEGGI WNVFD+VKTTTKTPEALM EI AAISNLEY RT AYL
Sbjct: 1 MHQRNWHKSQGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAYL 60
Query: 61 ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
ESPIS PEDEEPSANSRSQYDVR+ADGAYKAGCKALT+GKLDEALHSLNVSLSKCPPE
Sbjct: 61 ESPIS---PEDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
KSSAVAKIQSLISLTSQQ+QIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQIQIRSSNCQEISED 149
BLAST of CsaV3_4G034180 vs. ExPASy TrEMBL
Match:
A0A1S3BU07 (uncharacterized protein LOC103493531 OS=Cucumis melo OX=3656 GN=LOC103493531 PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 6.9e-65
Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0
Query: 1 MPQRNRHKSQERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAYL 60
M QRN HKSQ RESVNSEGGI WNVFD+VKTTTKTPEALM EI AAISNLEY RT AYL
Sbjct: 1 MHQRNWHKSQGRESVNSEGGITVWNVFDNVKTTTKTPEALMAEINAAISNLEYDRTAAYL 60
Query: 61 ESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPPE 120
ESPIS PEDEEPSANSRSQYDVR+ADGAYKAGCKALT+GKLDEALHSLNVSLSKCPPE
Sbjct: 61 ESPIS---PEDEEPSANSRSQYDVRIADGAYKAGCKALTIGKLDEALHSLNVSLSKCPPE 120
Query: 121 KSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
KSSAVAKIQSLISLTSQQ+QIRSSNCQEISED
Sbjct: 121 KSSAVAKIQSLISLTSQQIQIRSSNCQEISED 149
BLAST of CsaV3_4G034180 vs. ExPASy TrEMBL
Match:
A0A6J1FLM9 (uncharacterized protein LOC111446352 OS=Cucurbita moschata OX=3662 GN=LOC111446352 PE=4 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 4.6e-53
Identity = 115/153 (75.16%), Postives = 133/153 (86.93%), Query Frame = 0
Query: 1 MPQRNRHKSQE-RESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI AI+NLEYAR+TA+
Sbjct: 1 MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAF 60
Query: 61 LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
LESPISP P+D +S +QYD R+AD AYKAGC AL VGKLDEALHSLNVSLSKCPP
Sbjct: 61 LESPISP-TPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSLNVSLSKCPP 120
Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
EKSSAVAK+QSLISLTS+QLQIRSSNC EISED
Sbjct: 121 EKSSAVAKLQSLISLTSKQLQIRSSNCHEISED 152
BLAST of CsaV3_4G034180 vs. ExPASy TrEMBL
Match:
A0A6J1BP49 (uncharacterized protein LOC111026168 OS=Momordica charantia OX=3673 GN=LOC111026168 PE=4 SV=1)
HSP 1 Score: 184.1 bits (466), Expect = 4.3e-43
Identity = 106/153 (69.28%), Postives = 119/153 (77.78%), Query Frame = 0
Query: 1 MPQRNRHKS-QERESVNSEGGIAAWNVFDSVKTTTKTPEALMGEIGAAISNLEYARTTAY 60
MP R+ K+ +ERE+V S GGI AWN FD+V TTKTPEALM EI AAIS +EYARTTA
Sbjct: 18 MPHRDLPKNPKERENVISVGGIMAWNAFDNVTATTKTPEALMAEINAAISKIEYARTTAC 77
Query: 61 LESPISPDEPEDEEPSANSRSQYDVRMADGAYKAGCKALTVGKLDEALHSLNVSLSKCPP 120
LES +P +D A+ QYD RMAD AYKAGC AL VGKLD+ALHSLNVSLSKCPP
Sbjct: 78 LES-ATPPASQDGGSGASLMPQYDARMADEAYKAGCAALAVGKLDDALHSLNVSLSKCPP 137
Query: 121 EKSSAVAKIQSLISLTSQQLQIRSSNCQEISED 153
EK+SAVAK+ SLI+LTSQQL RSSNC EISED
Sbjct: 138 EKTSAVAKLLSLITLTSQQLH-RSSNCSEISED 168
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_011654103.1 | 1.4e-75 | 100.00 | uncharacterized protein LOC101212714 [Cucumis sativus] >KGN55178.1 hypothetical ... | [more] |
| XP_008452533.1 | 1.4e-64 | 89.47 | PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo] >KAA0064371.1 unc... | [more] |
| XP_038899466.1 | 1.6e-55 | 80.39 | uncharacterized protein LOC120086752 [Benincasa hispida] >XP_038899467.1 unchara... | [more] |
| KAG6608487.1 | 1.1e-53 | 76.47 | hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022940904.1 | 9.6e-53 | 75.16 | uncharacterized protein LOC111446352 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L090 | 6.6e-76 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639170 PE=4 SV=1 | [more] |
| A0A5A7VF87 | 6.9e-65 | 89.47 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3BU07 | 6.9e-65 | 89.47 | uncharacterized protein LOC103493531 OS=Cucumis melo OX=3656 GN=LOC103493531 PE=... | [more] |
| A0A6J1FLM9 | 4.6e-53 | 75.16 | uncharacterized protein LOC111446352 OS=Cucurbita moschata OX=3662 GN=LOC1114463... | [more] |
| A0A6J1BP49 | 4.3e-43 | 69.28 | uncharacterized protein LOC111026168 OS=Momordica charantia OX=3673 GN=LOC111026... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
