CsaV3_4G033810 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G033810
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 23954885 .. 23955710 (+)
RNA-Seq ExpressionCsaV3_4G033810
SyntenyCsaV3_4G033810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCCTGTTTTCGATAAGCTCACGGAGCGGTGAGATCTCAAAATCTTGAACATTCATTCTCGGCAATTGGGGTTTCTAAGAATGAGGTCTCTTGTTTTGAACTTGCTCTTCCTAACTTTTCTCTAGGTTTTGACAGCGAACGATAAGAGAGAGATATATACGAGCGTCTGAATCAATTTCTGCGACTGATTTGAGCACAAGACAGAGTAATAGCAATCAACTAGTTGAAACTGAAGGTAAGTAACCATTAATTTCTTTGGTCTGACTTGACGACTCTTTCGGAATGAAGCGTAATTCTTTTCTCTTTGGTAATACATGATGTAGGATGAATCCCATTCATGCGAAGTTTAGGGTGAACAAGTCAGGGGAGCATGACATGGAGCAACAATACACAAGGGTAAACCACTGGTTTCTCATATCTTGTCATTCTGATGTAACTGATTTTAAAATGATGAAATTTTATGAACGTTTTTGGTGGCTGCATAAGAAGTTTCGGTGTCTTAATAGCTTTGCTTCATGGAAAATTATTAGGATAAACTACGTAGGATTATACTATGCAAATATAAAATAAATTGATGAAAAAATTTCAAAGTTGATTTTTAGTGTTCAAACTTTGCAGTCATGAAAATATTATTTCATATTGTTCTAAACAACAAGATGATTGCTAAGAAGAAACAAGCTAAAACCATTTCTATTTTCATACTTAGAGACTGTTGATGTTCTCTTTGCAAATGGAGAAGATTTTGATCTGAGACTGTGTTGTGAAAATTGTAGACGGAAATGGAGATATGAAGTTTGGGGTCATCCAACAAGGCTATGTTAG

mRNA sequence

ATGAACCCTGTTTTCGATAAGCTCACGGAGCGGATGAATCCCATTCATGCGAAGTTTAGGGTGAACAAGTCAGGGGAGCATGACATGGAGCAACAATACACAAGGACTGTTGATGTTCTCTTTGCAAATGGAGAAGATTTTGATCTGAGACTGTGTTGTGAAAATTGTAGACGGAAATGGAGATATGAAGTTTGGGGTCATCCAACAAGGCTATGTTAG

Coding sequence (CDS)

ATGAACCCTGTTTTCGATAAGCTCACGGAGCGGATGAATCCCATTCATGCGAAGTTTAGGGTGAACAAGTCAGGGGAGCATGACATGGAGCAACAATACACAAGGACTGTTGATGTTCTCTTTGCAAATGGAGAAGATTTTGATCTGAGACTGTGTTGTGAAAATTGTAGACGGAAATGGAGATATGAAGTTTGGGGTCATCCAACAAGGCTATGTTAG

Protein sequence

MNPVFDKLTERMNPIHAKFRVNKSGEHDMEQQYTRTVDVLFANGEDFDLRLCCENCRRKWRYEVWGHPTRLC*
Homology
[Close]
BLAST of CsaV3_4G033810 vs. NCBI nr
Match: KGN55139.1 (hypothetical protein Csa_012260 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.1e-37
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MNPVFDKLTERMNPIHAKFRVNKSGEHDMEQQYTRTVDVLFANGEDFDLRLCCENCRRKW 60
          MNPVFDKLTERMNPIHAKFRVNKSGEHDMEQQYTRTVDVLFANGEDFDLRLCCENCRRKW
Sbjct: 1  MNPVFDKLTERMNPIHAKFRVNKSGEHDMEQQYTRTVDVLFANGEDFDLRLCCENCRRKW 60

Query: 61 RYEVWGHPTRLC 73
          RYEVWGHPTRLC
Sbjct: 61 RYEVWGHPTRLC 72

[Close]
BLAST of CsaV3_4G033810 vs. ExPASy TrEMBL
Match: A0A0A0L274 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637790 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-37
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MNPVFDKLTERMNPIHAKFRVNKSGEHDMEQQYTRTVDVLFANGEDFDLRLCCENCRRKW 60
          MNPVFDKLTERMNPIHAKFRVNKSGEHDMEQQYTRTVDVLFANGEDFDLRLCCENCRRKW
Sbjct: 1  MNPVFDKLTERMNPIHAKFRVNKSGEHDMEQQYTRTVDVLFANGEDFDLRLCCENCRRKW 60

Query: 61 RYEVWGHPTRLC 73
          RYEVWGHPTRLC
Sbjct: 61 RYEVWGHPTRLC 72

The following BLAST results are available for this feature:
BLAST of CsaV3_4G033810 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55139.12.1e-37100.00hypothetical protein Csa_012260 [Cucumis sativus][more]
BLAST of CsaV3_4G033810 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G033810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2741.0e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637790 PE=4 SV=1[more]
BLAST of CsaV3_4G033810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G033810.1CsaV3_4G033810.1mRNA