CsaV3_4G033590 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTACAACTCTCCACGTTTCATCATTAACATAATAATTGTTAATAAAAACGCACTCTTAAGAGGTAAAAATGGAAAAAATAAAAAGGAGAAGAAGAAGATCCACCGATTGAAGTTTACCGTAAATTGGAAAAATGGCTTACTCCAATCGATCTGTTGTTGCTTTCCGTTTTTCAAAAGCTTTGTTTGAACAATGCCATGGCGCTGCCGCTGCCGCTGCTGCTGTTCCTCCCTTCTCCCCCGCTCCCGCCGTTTCTATTTCTTATAAGGTAACTTTTGTAGGAATTGAAAACCAAAATTTTACTTTTTAATGTCCCCTTGCGTATGTTCTGCTTTTCATTTTATGATAGAAAAACCCAACATCCCATTTTGAATTTGATAGTATGATTATTTAAATATTTGTTTTTTGTTCATTTAATTACTATCTATTGATTGATTTTGTTTTCTTTTAATTTTGTTCGTTTGCTTATATACTATTAGGGGGAAGATCTCGATCCTAATAACATTGCTTTGAGAATCAAATTTCGATAATTAGTATGTTAAAGCAAACATTATTAAATAAAAATAGAAATATATAAGGTTAGTGATTGATTCTTTTCTCATTGATTACTTTTAGGGGTGAAAACAAAATCCCACATTGGTTAAGGAATGAAGTGATAAATCTAGGATTGGTTGGAAAAAGAAAGTGATCAAGAAATCACACATATCTCATCAGGTTTAAGATTTTTTTTGCAAAATCACGAGGGTTTATACCCGAAATGGACACACGTTGTCTACAAATAAACGCTTTCGTGGTATTAATTATGAAAGAAAAAGTAGTTTTTAACCCATCGAGCTAGATTCAAAATAAGCTGTTTTTGTAGACAACGTGTGTCCAGCTCGTCCAACTAGGGGGGCGCCATTGTGGCAATAATGTGAGAAGAGATTTGATGATTATAATTTGTCTTCAATTCAGGTTGATACAAGCGAGGAAAGGGACGTGACAGGAGCAAAAGCGGAAGAGCTGATAGCAGAGATGGTCAAAGATGGAAAGGTGAGAAGTACAGTGGAGGTGGCTTATGATGCAACGAAAGGGACGGCGGAGAAGGTGAAGGACACCGTAATTGCAGAGGCAAACGAAAATGTAGTGGACACTACTGAGTACAGAAGCATGGAGAATATGGGTAACTATCAAAAACATCTTACTTTTTTATATATATCTTTGATCCATCACAATTGGGTGATACGCACAAATATGATCAGTTAGCCTCGAATTTGCACAAGAAGCGATTCACATGCAGACTCTTTTCTATCATATTAATACTAGAATTAAATAATTTCTTTATCATGATTAATTTCAAATTAAAAATATTCTTCATTTTAACTATAATTCAATTCAATTCAAACTAACTATTTATTTTTCTTAACTTGAATATGAGCTGCTGTTGAATTTTTATTTTTCTATTTAACTTGACTTAAAACTCAAATTTATATTTTTTTAAAAAAAATTAATATGAGAAATAGTTAATTAAATATGCACGAAGATTTCAAGTGTATACATATCATTTGGAAAAACAAAAATTTGTAGCCAAAATAAACTTCACTTACTGATATCGGTACATGTAAGGCTCAATCGCCATCCCGTTGTACTAATAATAATGTATAATTTTGTATTTAGGTAAAGATATAATCGTGCAAGTCTATATTGTTGACTACTGCTACACAGCTATAGAAGCACAATTGTTAGTGTGGAATGAATCTGATACCTAATGCAAATAGATCAAGAAAATTTGAAAGAGACAAACCCATCATCTGAAATTTTAAGTAAATACTCAAATACATGTTTCTTCCAATTGGAAGTGCTTTTGATAATTTCATTTTCCCTTTTGGAAAGAAAAAATAGATGTTATTATTTATAGCTTTTGATGATCTGATTGATGAAGAAGCTTAAGGTCGTATATTTTCTTGCAGATGATCAGAAGCAATAGTTCTATGGCTTTTTAGCTTCCAACTGTTTGGCAAATATGAAAAAAGGGGATGAAGTTTCTCCATCGTCTTCTTAAATTAAAACCTCTCAATGTTAAGGGGTAATATGAATTTGGTTTGCCTATAATTTTATTGATTATATATAATAATAATTTTTTTTGGTTGTGGATGGGATACAATTTTGAGGATGATCCTATTGCTTCTTATAATATATACATATATATATGGGTTATTGTGTTTGTGAGTCTACCAACGTGATAAAAAAAAACTTGTACAAGTGATCAAATTGATGTGTGTCTGATAGACCTTAGTAGGGATAGAACTCTATCATTACCGTGATAGATATCATGTATAGGAACAAGATAAAATTTAGTCCTGAATTTGAATTAGTGATAGATATCATGTATAGGAA ATGGCTTACTCCAATCGATCTGTTGTTGCTTTCCGTTTTTCAAAAGCTTTGTTTGAACAATGCCATGGCGCTGCCGCTGCCGCTGCTGCTGTTCCTCCCTTCTCCCCCGCTCCCGCCGTTTCTATTTCTTATAAGGTTGATACAAGCGAGGAAAGGGACGTGACAGGAGCAAAAGCGGAAGAGCTGATAGCAGAGATGGTCAAAGATGGAAAGGTGAGAAGTACAGTGGAGGTGGCTTATGATGCAACGAAAGGGACGGCGGAGAAGGTGAAGGACACCGTAATTGCAGAGGCAAACGAAAATGTAGTGGACACTACTGAGTACAGAAGCATGGAGAATATGGATGATCAGAAGCAATAG ATGGCTTACTCCAATCGATCTGTTGTTGCTTTCCGTTTTTCAAAAGCTTTGTTTGAACAATGCCATGGCGCTGCCGCTGCCGCTGCTGCTGTTCCTCCCTTCTCCCCCGCTCCCGCCGTTTCTATTTCTTATAAGGTTGATACAAGCGAGGAAAGGGACGTGACAGGAGCAAAAGCGGAAGAGCTGATAGCAGAGATGGTCAAAGATGGAAAGGTGAGAAGTACAGTGGAGGTGGCTTATGATGCAACGAAAGGGACGGCGGAGAAGGTGAAGGACACCGTAATTGCAGAGGCAAACGAAAATGTAGTGGACACTACTGAGTACAGAAGCATGGAGAATATGGATGATCAGAAGCAATAG MAYSNRSVVAFRFSKALFEQCHGAAAAAAAVPPFSPAPAVSISYKVDTSEERDVTGAKAEELIAEMVKDGKVRSTVEVAYDATKGTAEKVKDTVIAEANENVVDTTEYRSMENMDDQKQ* Homology
BLAST of CsaV3_4G033590 vs. NCBI nr
Match: XP_004146059.1 (uncharacterized protein LOC101215612 [Cucumis sativus] >KGN55118.1 hypothetical protein Csa_012887 [Cucumis sativus]) HSP 1 Score: 220.7 bits (561), Expect = 6.8e-54 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsaV3_4G033590 vs. NCBI nr
Match: XP_038899913.1 (uncharacterized protein LOC120087104 [Benincasa hispida]) HSP 1 Score: 107.5 bits (267), Expect = 8.4e-20 Identity = 70/114 (61.40%), Postives = 82/114 (71.93%), Query Frame = 0
BLAST of CsaV3_4G033590 vs. NCBI nr
Match: KAA0066826.1 (putative chilling-induced protein [Cucumis melo var. makuwa] >TYK27973.1 putative chilling-induced protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 1.5e-13 Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0
BLAST of CsaV3_4G033590 vs. NCBI nr
Match: XP_020418791.1 (uncharacterized protein LOC109949012 [Prunus persica]) HSP 1 Score: 57.8 bits (138), Expect = 7.6e-05 Identity = 31/57 (54.39%), Postives = 44/57 (77.19%), Query Frame = 0
BLAST of CsaV3_4G033590 vs. NCBI nr
Match: KAG6607884.1 (hypothetical protein SDJN03_01226, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 55.5 bits (132), Expect = 3.8e-04 Identity = 47/110 (42.73%), Postives = 61/110 (55.45%), Query Frame = 0
BLAST of CsaV3_4G033590 vs. ExPASy TrEMBL
Match: A0A0A0L055 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G631600 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 3.3e-54 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsaV3_4G033590 vs. ExPASy TrEMBL
Match: A0A5D3DWB9 (Putative chilling-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001770 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.4e-14 Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0
BLAST of CsaV3_4G033590 vs. ExPASy TrEMBL
Match: A0A6J5UQH8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS27235 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 5.3e-04 Identity = 28/57 (49.12%), Postives = 44/57 (77.19%), Query Frame = 0
BLAST of CsaV3_4G033590 vs. ExPASy TrEMBL
Match: A0A6P6G3Q0 (uncharacterized protein LOC112488976 OS=Ziziphus jujuba OX=326968 GN=LOC112491368 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 9.1e-04 Identity = 27/61 (44.26%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of CsaV3_4G033590 vs. ExPASy TrEMBL
Match: A0A5E4ELX8 (PREDICTED: chilling-induced OS=Prunus dulcis OX=3755 GN=ALMOND_2B028045 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 9.1e-04 Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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