CsaV3_4G033520 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G033520
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	PRA1 family protein
Location	chr4: 23722525 .. 23725518 (+)
RNA-Seq Expression	CsaV3_4G033520
Synteny	CsaV3_4G033520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTAATCAATCAACGTCTTCAGAATTGGATGTTGAATAGTTCAATTTGTTCTAATTTTATAAAGAGAACATTGAGTTAGTCTTTGTCTTGTGATGCTTCATTAATACTAACACTTCTCTATGTCAGTCGTCTAGTTCTATATTGTAATGGAATAAAGAAAAAAAACTTTTTTGGGTCAAAAGAACCCAATTTCCCGGAGTCCGGGGCCCGCCGGGATCGTTAACGGTGGCGTTGATGATTTGATTGGCGAGAAGGAGGATAAAGCGATGTACCCACCTTCACCTCTACAACAAAACAAACGCAACAATCTCAAATCAACAATCTTCAACCACAAGGCAATTACATTCAGCCTTTTTATATAACCCTTTTGTCTCTTTTGATTCTGAATTCGTTTTTGTTGTGTTGTGGCGATTAGGAATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCGGACGCCGCTTTCGATTCATGGCTTCGTGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGCCATTCCTCTGCCGCTCCCCCCGCCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTTAACCCCTTTGCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACCCCTTCCTGGACTACTGGGTTTGTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTATGTTCTTCTCTTTCTCCTGTTAATTATGTCTATTGATGGGCTGTGTGCTGCGGATTCTGGTCTTGACGTTGAAATTGTTGTCTTTCCTGTGGGTTGCGAATTGGGTTCTGTTTGGTTTTACTTGGTGGGAATGGGAAGAGTACAAGTACAAGCTATGAAAACATCGATTTGTTAAAGCGTTTTGATTAAGATATGATGATGGGTTTAGTGATTTGGTTTGATTTTTTAAGCTCGTGGGGCTTAAGACTTTTGCAGCCTAATCGATTGCTGATCCCAATGTGAAACATATAGAAAGAATGGCTTGCATTCTTTTTGTGGATTTTAGTGGTTTGACTGAACAGGGAACCACTGTCACTGTTGTTGGTCATTAAACTAGAACACCACTCTATTACTAGTTTATATATTCATGTTCCTTTCTTTGGGATGAATGAGCGTTTGCATGGAGTGAACATAAAAAATGTTGGCTAGAGATTTATGACCTTTATTTTACCAATTTCTTGTTTCTTAACTTTAAATTCTCATGTGGATGATTGCAGATACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGACATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCAGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGCGGTATGTTACTGACGTTTTAAAACCGTGTTTATTTACATACCTGAGAGGTTCCTCCCAATTGTTTCCTTTAAACATGTATTAATTAATTGGTATTCTGTTTCATTGTTGCATTTTCACATAGAGAATTTCAGTTGAAAATAGATATCCGTAGAGATACAGATTACTATAGTATAGATCATCAGTATAGATGTAGAGTTTAGATCTCAAATTGAAAGCATACCAAGATTACTAGTTACTGCTTGTTGAATGGTTATTGTTTTGCCTGTTCCTTTTGGTTAAAGATTTCAAGCCTCAAGGCTATTGTTTTCTCAATTTGAGATGACCATCGATTGAAAACTTTAGCACAGTTGTTCCTTAGTTCTTGAAATGGAGCCAAGCTAATGAGTTGGCCAAATGTGTAGCAAAGCATAATTTCTGCCTGTTTGATGCTGGAAAAGTTTTACTTTGTACTTCAAATGGCATTTGGAATCCTTGGAATTTTTTCAAAACCCTTCTTTTTGATACAGCTTTGTGGGATTGTTGGACTTTAAAATTCAGATCCTGCTGTAGTGCTGTATGCTTTTATTCGTTGTTTTCATGTAAATTACCATCCGTGAGTTCACAATTGTTCGGACTGCTATTGTTATTTAATTACGTAGCATCTTAAATACTTGACAAGTATAATGTTTTGCAGCGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTAACTTCAGAATTCTAGGCCATGTTATAGAGTTCATTATTATCAGTTGTTCTTATCACCTTTGAAATCTTGGCAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCACATCTACCGTAAGTCGGAAATAGACAGTTACAGGCAATGGTATTTGTCCTCCTATATATAAGTTAAGCCTAATGCAAGGTACCAACATCTGATTCTGTTGAAGACGAAAAGTTCTAGTAATGCTGATCGCAAACTTGAAAGCATGACTGATGTACGTCAGCAGGCACCGTGCCCTTGCTTGAAAATTCATATTACGGTGTGGGGCACGGTGACCATCGTATTGCCCAAGAGTTTCATCTTCCTCTGTTAAAGGCTAGAACCAAGAAACAAGTCAAGCTCAAATCTCGTTTAATTTGTTTGTTTCATTAGTTAATGAAAATTAAGTATGGTTAATTTTGTAGGTCATAACACTACTACATGATATTTAGTTCCAGCTTATGACTTGTACCACAAATGTAGCATTTTGTGCTTACATTTTCTATGAATGAGAGTTTATCAGATTTCAGGTGAAGTACAGAAAGCTCTAATTTTTCTTGTCTAACAAGAAGCCTGCATCTCAATCCTTATACTTTCGATAAAGGATGTAATTGAAAACATCAGTTTCTGTTCAGTTATGCACCTTTTTATTAAAGATGGCTTAAGGTTAATCAGGAAGGATTTGCT

mRNA sequence

ATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCGGACGCCGCTTTCGATTCATGGCTTCGTGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGCCATTCCTCTGCCGCTCCCCCCGCCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTTAACCCCTTTGCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACCCCTTCCTGGACTACTGGGTTTGTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTATACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGACATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCAGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGCGCGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCACATCTACCGTAAGTCGGAAATAG

Coding sequence (CDS)

ATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCGGACGCCGCTTTCGATTCATGGCTTCGTGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGCCATTCCTCTGCCGCTCCCCCCGCCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTTAACCCCTTTGCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACCCCTTCCTGGACTACTGGGTTTGTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTATACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGACATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCAGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGCGCGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCACATCTACCGTAAGTCGGAAATAG

Protein sequence

MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK*

Homology

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BLAST of CsaV3_4G033520 vs. NCBI nr
Match: XP_004146052.1 (PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PRA1 family protein H [Cucumis sativus] >KGN55111.1 hypothetical protein Csa_012113 [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 6.3e-128
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 236
           CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK
Sbjct: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235

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BLAST of CsaV3_4G033520 vs. NCBI nr
Match: XP_008463685.1 (PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 family protein H [Cucumis melo])

HSP 1 Score: 458.8 bits (1179), Expect = 2.9e-125
Identity = 228/235 (97.02%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 236
           CLVRIAQCAT IILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKP ST+SRK
Sbjct: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 235

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BLAST of CsaV3_4G033520 vs. NCBI nr
Match: KAA0066819.1 (PRA1 family protein H [Cucumis melo var. makuwa] >TYK27966.1 PRA1 family protein H [Cucumis melo var. makuwa])

HSP 1 Score: 440.3 bits (1131), Expect = 1.1e-119
Identity = 228/272 (83.82%), Postives = 232/272 (85.29%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCT-------------------------------------L 180
           HENAKRYARNYASLFVLFFVCT                                     L
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYVLLFLLLIVSIDGLFAADSGLTLKLLYFLEVVNWVL 180

Query: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATVIILLFSNFQMAI 236
           YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCAT IILLFSNFQMAI
Sbjct: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI 240

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BLAST of CsaV3_4G033520 vs. NCBI nr
Match: XP_038898448.1 (PRA1 family protein H [Benincasa hispida])

HSP 1 Score: 431.8 bits (1109), Expect = 3.8e-117
Identity = 220/238 (92.44%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPARPTPTAAAPL 60
           MSFS NPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   AA P RPTP AAAPL
Sbjct: 1   MSFSPNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAPAAAAPTRPTPAAAAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQAR 120
           ATGFFISLFSR+ TLLSIFTLNPFAKLSAADFSGPTPSWT+GFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISLFSRMGTLLSIFTLNPFAKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWD+VKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 236
           LWQCLVRIAQC TVIILLF NFQMAIFCALGIGYTGMILHAAFRKLT TKP + VSRK
Sbjct: 181 LWQCLVRIAQCVTVIILLFCNFQMAIFCALGIGYTGMILHAAFRKLTLTKPPAAVSRK 238

[Close]

BLAST of CsaV3_4G033520 vs. NCBI nr
Match: KAG6591944.1 (PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024817.1 PRA1 family protein H [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429.1 bits (1102), Expect = 2.5e-116
Identity = 215/238 (90.34%), Postives = 225/238 (94.54%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPARPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   AA P RPTP A APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAAPTRPTPIAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSAADF+GPTPSWT+GFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 236
           +WQCLVRIAQC TVIILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+P S+++RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

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BLAST of CsaV3_4G033520 vs. ExPASy Swiss-Prot
Match: Q8LFP1 (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-70
Identity = 136/235 (57.87%), Postives = 171/235 (72.77%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRT--------SDLHRHSSAAPPARPTPT 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RT        S     SSAA  +  +  
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  AAAPLATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSS 120
             + +  GFF SL SR+ T+ S+ T+NPF+KLSA DFSG T  WTTGF+G  +SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTK 228
           D++P + +  + I QCAT ++L F N QMA+F AL I Y+ MILHA FRKLTP+K
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSK 235

[Close]

BLAST of CsaV3_4G033520 vs. ExPASy TrEMBL
Match: A0A0A0L4P4 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.0e-128
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 236
           CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK
Sbjct: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235

[Close]

BLAST of CsaV3_4G033520 vs. ExPASy TrEMBL
Match: A0A1S3CLE4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.4e-125
Identity = 228/235 (97.02%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 236
           CLVRIAQCAT IILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKP ST+SRK
Sbjct: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 235

[Close]

BLAST of CsaV3_4G033520 vs. ExPASy TrEMBL
Match: A0A5A7VNH6 (PRA1 family protein H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001700 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.2e-120
Identity = 228/272 (83.82%), Postives = 232/272 (85.29%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCT-------------------------------------L 180
           HENAKRYARNYASLFVLFFVCT                                     L
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYVLLFLLLIVSIDGLFAADSGLTLKLLYFLEVVNWVL 180

Query: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATVIILLFSNFQMAI 236
           YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCAT IILLFSNFQMAI
Sbjct: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI 240

[Close]

BLAST of CsaV3_4G033520 vs. ExPASy TrEMBL
Match: A0A6J1IMK5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.5e-116
Identity = 214/238 (89.92%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPARPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   A  P RPTPTA APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSAADF+GPTPSWT+GFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRW LDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALDKYPV 180

Query: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 236
           +WQCLVRIAQC TVIILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+P S+++RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]

BLAST of CsaV3_4G033520 vs. ExPASy TrEMBL
Match: A0A6J1F5I6 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.0e-115
Identity = 213/238 (89.50%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPARPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   A  P RPTP A APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPIAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPFAKLSAADF+GPTPSWT+GFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRWGLD+YPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDQYPV 180

Query: 181 LWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 236
           +WQCLVRIAQC TVIILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+P S+++RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]

BLAST of CsaV3_4G033520 vs. TAIR 10
Match: AT4G27540.1 (prenylated RAB acceptor 1.H )

HSP 1 Score: 267.7 bits (683), Expect = 8.9e-72
Identity = 136/235 (57.87%), Postives = 171/235 (72.77%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRT--------SDLHRHSSAAPPARPTPT 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RT        S     SSAA  +  +  
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  AAAPLATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSS 120
             + +  GFF SL SR+ T+ S+ T+NPF+KLSA DFSG T  WTTGF+G  +SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTK 228
           D++P + +  + I QCAT ++L F N QMA+F AL I Y+ MILHA FRKLTP+K
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSK 235

The following BLAST results are available for this feature:

BLAST of CsaV3_4G033520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146052.1	6.3e-128	100.00	PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PRA1 family protein H [C...	[more]
XP_008463685.1	2.9e-125	97.02	PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 ...	[more]
KAA0066819.1	1.1e-119	83.82	PRA1 family protein H [Cucumis melo var. makuwa] >TYK27966.1 PRA1 family protein...	[more]
XP_038898448.1	3.8e-117	92.44	PRA1 family protein H [Benincasa hispida]	[more]
KAG6591944.1	2.5e-116	90.34	PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG70248...	[more]

BLAST of CsaV3_4G033520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFP1	1.2e-70	57.87	PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1	[more]

BLAST of CsaV3_4G033520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4P4	3.0e-128	100.00	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1	[more]
A0A1S3CLE4	1.4e-125	97.02	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1	[more]
A0A5A7VNH6	5.2e-120	83.82	PRA1 family protein H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38...	[more]
A0A6J1IMK5	3.5e-116	89.92	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1	[more]
A0A6J1F5I6	1.0e-115	89.50	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1	[more]

BLAST of CsaV3_4G033520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27540.1	8.9e-72	57.87	prenylated RAB acceptor 1.H	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 103..222 e-value: 1.1E-14 score: 54.3
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..229
None	No IPR available	PANTHER	PTHR19317:SF1	PRA1 FAMILY PROTEIN H	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G033520.1	CsaV3_4G033520.1	mRNA