CsaV3_4G032350 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G032350
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 22866527 .. 22866718 (-)
RNA-Seq ExpressionCsaV3_4G032350
SyntenyCsaV3_4G032350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTCCAGACAGGCACCTATCTCGAATATGCCTGGTTATTGTGAATGTGAGTTTGGATCGAGGCATCATCAGGCTGTTCCTACAACAACAAGAATTACATCCTCACAAAAGGAGAATCCGAGATGTAATTGTCAAGAAGCACACATAACCAAAGACATACCACATCTTGCAGATTATCCTCGACCTGATTAA

mRNA sequence

CTGTCCAGACAGGCACCTATCTCGAATATGCCTGGTTATTGTGAATGTGAGTTTGGATCGAGGCATCATCAGGCTGTTCCTACAACAACAAGAATTACATCCTCACAAAAGGAGAATCCGAGATGTAATTGTCAAGAAGCACACATAACCAAAGACATACCACATCTTGCAGATTATCCTCGACCTGATTAA

Coding sequence (CDS)

CTGTCCAGACAGGCACCTATCTCGAATATGCCTGGTTATTGTGAATGTGAGTTTGGATCGAGGCATCATCAGGCTGTTCCTACAACAACAAGAATTACATCCTCACAAAAGGAGAATCCGAGATGTAATTGTCAAGAAGCACACATAACCAAAGACATACCACATCTTGCAGATTATCCTCGACCTGATTAA

Protein sequence

LSRQAPISNMPGYCECEFGSRHHQAVPTTTRITSSQKENPRCNCQEAHITKDIPHLADYPRPD*
Homology
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BLAST of CsaV3_4G032350 vs. NCBI nr
Match: KAE8649798.1 (hypothetical protein Csa_012877 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 3.6e-30
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  LSRQAPISNMPGYCECEFGSRHHQAVPTTTRITSSQKENPRCNCQEAHITKDIPHLADYP 60
          +SRQAPISNMPGYCECEFGSRHHQAVPTTTRITSSQKENPRCNCQEAHITKDIPHLADYP
Sbjct: 1  MSRQAPISNMPGYCECEFGSRHHQAVPTTTRITSSQKENPRCNCQEAHITKDIPHLADYP 60

Query: 61 RPD 64
          RPD
Sbjct: 61 RPD 63

The following BLAST results are available for this feature:
BLAST of CsaV3_4G032350 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649798.13.6e-3098.41hypothetical protein Csa_012877 [Cucumis sativus][more]
BLAST of CsaV3_4G032350 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G032350 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G032350 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G032350.1CsaV3_4G032350.1mRNA