CsaV3_4G031500 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G031500
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 21960304 .. 21960644 (+)
RNA-Seq ExpressionCsaV3_4G031500
SyntenyCsaV3_4G031500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAATTATGACGTTGAGTCCTCCTCCTGCAGCAGTGGCAATGGCTTTGTACACAAAGGACAAGAATTGTGATTCTTAAGCCACTTGAAGATGCATGATTCATCATAAACATGCCCACACCGAATCCTTTATCACCTCCCTCTTTTCACAATGGACTTTTAAAGAGAGATAAAAACAGAGCATTGTGGTATGGAATCCTTGGAGTGGAGTTTCATGGAGGATCTAATAAGCTTTTTCGAACAAATGATATCTGTTCCTTTGGTCATCGGACGTCCACATCAATTCCATTGCCTCTGCTGTTGGATCGGAGCCGTACAGACGATACTGAATCATATTAA

mRNA sequence

ATGAAGAATTATGACGTTGAGTCCTCCTCCTGCAGCAGTGGCAATGGCTTTAGAGATAAAAACAGAGCATTGTGGTATGGAATCCTTGGAGTGGAGTTTCATGGAGGATCTAATAAGCTTTTTCGAACAAATGATATCTGTTCCTTTGGTCATCGGACGTCCACATCAATTCCATTGCCTCTGCTGTTGGATCGGAGCCGTACAGACGATACTGAATCATATTAA

Coding sequence (CDS)

ATGAAGAATTATGACGTTGAGTCCTCCTCCTGCAGCAGTGGCAATGGCTTTAGAGATAAAAACAGAGCATTGTGGTATGGAATCCTTGGAGTGGAGTTTCATGGAGGATCTAATAAGCTTTTTCGAACAAATGATATCTGTTCCTTTGGTCATCGGACGTCCACATCAATTCCATTGCCTCTGCTGTTGGATCGGAGCCGTACAGACGATACTGAATCATATTAA

Protein sequence

MKNYDVESSSCSSGNGFRDKNRALWYGILGVEFHGGSNKLFRTNDICSFGHRTSTSIPLPLLLDRSRTDDTESY*
Homology
[Close]
BLAST of CsaV3_4G031500 vs. NCBI nr
Match: KGN54890.1 (hypothetical protein Csa_012770 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-35
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MKNYDVESSSCSSGNGFRDKNRALWYGILGVEFHGGSNKLFRTNDICSFGHRTSTSIPLP 60
          MKNYDVESSSCSSGNGFRDKNRALWYGILGVEFHGGSNKLFRTNDICSFGHRTSTSIPLP
Sbjct: 1  MKNYDVESSSCSSGNGFRDKNRALWYGILGVEFHGGSNKLFRTNDICSFGHRTSTSIPLP 60

Query: 61 LLLDRSRTDDTESY 75
          LLLDRSRTDDTESY
Sbjct: 61 LLLDRSRTDDTESY 74

[Close]
BLAST of CsaV3_4G031500 vs. ExPASy TrEMBL
Match: A0A0A0KYX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572350 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.3e-36
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MKNYDVESSSCSSGNGFRDKNRALWYGILGVEFHGGSNKLFRTNDICSFGHRTSTSIPLP 60
          MKNYDVESSSCSSGNGFRDKNRALWYGILGVEFHGGSNKLFRTNDICSFGHRTSTSIPLP
Sbjct: 1  MKNYDVESSSCSSGNGFRDKNRALWYGILGVEFHGGSNKLFRTNDICSFGHRTSTSIPLP 60

Query: 61 LLLDRSRTDDTESY 75
          LLLDRSRTDDTESY
Sbjct: 61 LLLDRSRTDDTESY 74

The following BLAST results are available for this feature:
BLAST of CsaV3_4G031500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54890.11.5e-35100.00hypothetical protein Csa_012770 [Cucumis sativus][more]
BLAST of CsaV3_4G031500 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G031500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYX27.3e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572350 PE=4 SV=1[more]
BLAST of CsaV3_4G031500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G031500.1CsaV3_4G031500.1mRNA