CsaV3_4G031300 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAAAAAAAAAGTAGAAAGTTCCACACAAATCTCAAAATTTGATCGAAATTTTACCCCTTCGATTTCGGAGTTATTTTCTCAATAAATAACAATCCTACGAGGCATCAAACTCGAAAGATCCGGATACTATCCGCCAGCTCATTTGACACGTGTCAAAAACCCATTGCAGCTCCGAAAATCGCGAGCAACCCGGAAATCAGAATAAGAAAGAAAGCAATTAATTGAGAATGGAGATACACTGATAAGCTCAAAAAAATGCTTAATTCCTCGTCTTTATCTCATACAATGGCAGGAATCAGGCCTTGCTGTTCAACTCTTCCTTCAAGAAGGTGAACCTTTTTCCTTCTTTTATTGGCCCCTTCAGTTCAAATTCGATTTTTCCTTTCTTTTTCTTTTCAATCCCCATTCCATTTGGCCTCTTCAAACCTACCTTTGAGATATTCTTGACATCATTTTTCATTTGTTCTACCCATTCTAATTTCTGGGTTTTCTCTGTTTGTGTTACTTTAGTAAATTTATTTGAAGAAAATGGAAAAATACTGCAATTCTATGTTTCATTTCACACTGCCAATTTGTTTAAGTAGTTAACTGTTTTTAGCTACATTATTACATTAGGATGATGATAAGAGGTTTGTGTCTAGCAGTTAGTCTTAGTGCTTTTGGCATGCATTTTGACGCAAGTGTTATTTTTATTGAAGCACTTAAGTCACTTTTGGAAGATGAAACATTTCAATACTTCAACTAAAATTACTTGATTCTCTTTTTTTTTTAGAATTTCATAGACCACTAATAAGCAATCTCAATGTTAAAAATGAATTTTCCAGTAGAACTCTTAACTGTTAAATTCCATGAATGCTGCATTTCACTTGATTATTTAGATGCATTAACTAGACACAACATTGATGGCTTCTACTCATGTCCTAGATCGTCGAAGAGCTAAATTTTCCTTTTAGTTCGGTAATCTGCCAAAAGATTTTCTAGCTTCGTGCGTAAAGGAATCCTCAGTGTATTTTGTTTGATCACAGCTGAGCCAAGATATCTAACCCAAAATCGCATATATTAGGCGCCATCCATGTATAAAAAAGAATTGTATCGACACCATTATTTTTCTGTGTGTTTTCCTTATTATTAGGCAAGTAGTTTGAATCCCTGTTGTCATTTCCTAGGGTTGGTAAAATAAATTAAAACATATGAGAAAGAAAGATTTTGAATAAAAATACAACACTAAGATATTTTATAAGTGATTCTTCAACTCTTTCTATAGTATTTTTATTCCTAATTTTTCTTTCTCTAATGCTTGAATTTATTTTACCAACCCTAGAATTGAGTTTGGTTGTTTCTAATATTCTTCTATGTTCCTATAAAGTGTTTGTTTTTGTGGTCTTCTAATTTCCTGAGGTTTGGGATTTATAGAAATTTATTGTTGTGATGAAGGATGATATATTATGAGCCTTGGCTGTTTTGAATGCAAAAATGAGTCTTTTATGCCAAATGAAAACAATTTACACTCTCTTTTGTTCATATGAAATAAAGGGATTAAGTATGTGTTTCCTCCAGCAACCCAAGGACATCCTGGTTAACTTTAAGGACTGTTCCTCATCGAAGAACCTATCCAGGGAAACGAGTTCTTCAGAGAAAAGTTGGAATTAAAGCTGAAATAAATTTTGTCAATGCTGAAGAAGCCAAAAAACTAATTGCAGTTGATGGATATGTAATCGTTGATGTTCGGGACAAATCGCAGTTCGATCGAGCTCACATTAAATCATGTTACCATGTCCCACTTTTCATTGAAAACCAAGACAATGATCTTGGTAAAATTTTCTGCTTCCCTAACTATTCTGATATTAGATGTGCTTGTGAGTGCTTTTAGCGAAATACTTCGAGATTGAGTCAAATAAGTATCAAACACTTTTAAAGTACTTTTTAGTATTTCAAAAGTGGTTCTACTAAATTTAAACATTGTGTTGTGCAGGAACCATCATAAAAAGGACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACAAAACTTAACCCTGAGTTTGTGCAGTCTGTTAAAGCCCAGCTTTCACCTCAAAGCAAGTTATTGCTAGTTTGTCAGGAAGGATTAAGGTTTTTTTTTTTTTTTTAATTTTTCTGTAGATGTGCTTTGTGAGTTTAAACTACAAATTTGGTTTGTTGAAAGAAAGTTAAAATTTAGTCGTTTATACTTGTTAAAACCTTCCTAAATAGTACCTTAGGAACTGTTTATGAAATTTTATCAAACTATATAAATGAAATTCTAACTTTTAAAATTATGAGATTAATTCTAACTTTCTCCGAAACGTTGACTATAGGGATCGAATTTGTAATTTAACTGATTTGTAACGCTAAATTATGGTATGGTTAACAGAGACTAAGAGTGATTTTCTGGTTGTTAAGATTATTCCTTTATGGATGTGTTGGTGCCGTTTAATTGAGCTATGTACATTGCTTTTTTGGAACATTCAATCTGGCAAAAAAAAAACAAAAGGAGATTAATTATAATCAGTGTGTTATAATTGGTAATTAGATCCACTGCTGCTGCGGACAAGTTAGAGAAAGCTGGTTTTGAAAACATTGCTTGTATAACTTCAGGACTCCAATCTGTAAAACCAGGTCAAGTTTTCAATCCTTCAAATATTTCTACATATTTATTCTAACTCCAAAGCTTTAAAACCCAATTCACATTTTTGGTTTTCTTTTTTTTTTAATTTCTTTTATCATGATAGGCTCATTTGACTCAGTTGGTTCGACCCAATTACAAGATGCTGGCAAAGCCGGTTTGGTAACAATTCAAGGCAAAATTTCAGCTGTACTAGGAACTGTTCTTATCTGTAAGTCTCCTCAACTCTATACCATCCTATTTATTTATTAACAACATTTTGATGGGCAGCATCGTTTTTCATATTAACTTTTAATGTAGGTTAAATTAAATGTATGTTTTAGTCTCTACTCTCTAATGTTTGGTTGTTTCTCTCAATTTAGTCCTTATTGTTCAAAATATTTCAACTTAGTCCATTACAGGTTTACGCTTTTTTATTCAATCTCTAACTCTTGGTGAATGTTATAGTTGATTGTTCATTGTAAACTTACGTCACATGATACTTTGCATAAGAAGAAGAATTGAAATTTCTATGAAATTCTTGGGTGATATTAGGTCGGTAATTATTATATTTATTATTTCTCTTTTTGAAAAAAGATTGTTGAGTAGAGCCCAATCCGTTGGACATGGAACTAAAAGTTGAAGGAACTAATAAACACATTTTAAAGTTTGATTTATTGCATATCAAATTGAAAGTACAAAGACCTACAAAGACCAAATATACGAACTCAAAGGTTTATAACCTTTTCTAAAGGTTGCTTATAGCCCTTTTCTCCATGTATATATTTGATGTACTTATTATTATTATTATTATTATTTTATTTACTTGGGACTTTCTGTATTTATTTGAATTACTATATTCACCTAACTACACAATATTTTTTTAAAAATAATATACCTTTTTATTTTATTTGCTTTGGAAATAAAAATAGACTTATGTAGTATGCATATACTGATGAGAATTATTTGAATGAATTTGGCAGGTGCATATTTATTCGTAACTTTGTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATGGCACCAACAGGCTAAACTTCTTTTATTGTCTAAACATTAACCCTTTAATTTTATTTTTAATTAGTTTTCTTTTAGTTTTATTTTTTTGTTTAGATATTATTATTAATTGCTGTCATTAAAATGCATATATATTTTCTACCACTCTTTTTTTACCCCTTTATATTCGTAACACAGTTGAATTTTGGAACTAATCATAATTTGTTAGGTTATTTACTAAATTAATGATGAAAATTATAAATAATTGAATTTGAG ATGCTTAATTCCTCGTCTTTATCTCATACAATGGCAGGAATCAGGCCTTGCTGTTCAACTCTTCCTTCAAGAAGCAACCCAAGGACATCCTGGTTAACTTTAAGGACTGTTCCTCATCGAAGAACCTATCCAGGGAAACGAGTTCTTCAGAGAAAAGTTGGAATTAAAGCTGAAATAAATTTTGTCAATGCTGAAGAAGCCAAAAAACTAATTGCAGTTGATGGATATGTAATCGTTGATGTTCGGGACAAATCGCAGTTCGATCGAGCTCACATTAAATCATGTTACCATGTCCCACTTTTCATTGAAAACCAAGACAATGATCTTGGAACCATCATAAAAAGGACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACAAAACTTAACCCTGAGTTTGTGCAGTCTGTTAAAGCCCAGCTTTCACCTCAAAGCAAGTTATTGCTAGTTTGTCAGGAAGGATTAAGATCCACTGCTGCTGCGGACAAGTTAGAGAAAGCTGGTTTTGAAAACATTGCTTGTATAACTTCAGGACTCCAATCTGTAAAACCAGGCTCATTTGACTCAGTTGGTTCGACCCAATTACAAGATGCTGGCAAAGCCGGTTTGGTAACAATTCAAGGCAAAATTTCAGCTGTACTAGGAACTGTTCTTATCTGTGCATATTTATTCGTAACTTTGTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATGGCACCAACAGGCTAA ATGCTTAATTCCTCGTCTTTATCTCATACAATGGCAGGAATCAGGCCTTGCTGTTCAACTCTTCCTTCAAGAAGCAACCCAAGGACATCCTGGTTAACTTTAAGGACTGTTCCTCATCGAAGAACCTATCCAGGGAAACGAGTTCTTCAGAGAAAAGTTGGAATTAAAGCTGAAATAAATTTTGTCAATGCTGAAGAAGCCAAAAAACTAATTGCAGTTGATGGATATGTAATCGTTGATGTTCGGGACAAATCGCAGTTCGATCGAGCTCACATTAAATCATGTTACCATGTCCCACTTTTCATTGAAAACCAAGACAATGATCTTGGAACCATCATAAAAAGGACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACAAAACTTAACCCTGAGTTTGTGCAGTCTGTTAAAGCCCAGCTTTCACCTCAAAGCAAGTTATTGCTAGTTTGTCAGGAAGGATTAAGATCCACTGCTGCTGCGGACAAGTTAGAGAAAGCTGGTTTTGAAAACATTGCTTGTATAACTTCAGGACTCCAATCTGTAAAACCAGGCTCATTTGACTCAGTTGGTTCGACCCAATTACAAGATGCTGGCAAAGCCGGTTTGGTAACAATTCAAGGCAAAATTTCAGCTGTACTAGGAACTGTTCTTATCTGTGCATATTTATTCGTAACTTTGTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATGGCACCAACAGGCTAA MLNSSSLSHTMAGIRPCCSTLPSRSNPRTSWLTLRTVPHRRTYPGKRVLQRKVGIKAEINFVNAEEAKKLIAVDGYVIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKLNPEFVQSVKAQLSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGSFDSVGSTQLQDAGKAGLVTIQGKISAVLGTVLICAYLFVTLFPEQAEKLLQMAPTG* Homology
BLAST of CsaV3_4G031300 vs. NCBI nr
Match: XP_004144667.1 (rhodanese-like domain-containing protein 9, chloroplastic [Cucumis sativus] >KGN54867.1 hypothetical protein Csa_011925 [Cucumis sativus]) HSP 1 Score: 485.7 bits (1249), Expect = 2.3e-133 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. NCBI nr
Match: XP_008442228.1 (PREDICTED: rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucumis melo] >KAA0041142.1 rhodanese-like domain-containing protein 9 [Cucumis melo var. makuwa]) HSP 1 Score: 469.2 bits (1206), Expect = 2.3e-128 Identity = 236/245 (96.33%), Postives = 242/245 (98.78%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. NCBI nr
Match: XP_038883761.1 (rhodanese-like domain-containing protein 9, chloroplastic [Benincasa hispida]) HSP 1 Score: 438.3 bits (1126), Expect = 4.3e-119 Identity = 219/235 (93.19%), Postives = 226/235 (96.17%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. NCBI nr
Match: XP_022928591.1 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 434.5 bits (1116), Expect = 6.2e-118 Identity = 216/245 (88.16%), Postives = 232/245 (94.69%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. NCBI nr
Match: XP_022967885.1 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 433.3 bits (1113), Expect = 1.4e-117 Identity = 216/245 (88.16%), Postives = 231/245 (94.29%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 2.5e-82 Identity = 147/199 (73.87%), Postives = 178/199 (89.45%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 7.8e-23 Identity = 53/145 (36.55%), Postives = 89/145 (61.38%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14 Identity = 47/157 (29.94%), Postives = 79/157 (50.32%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. ExPASy Swiss-Prot
Match: Q94A65 (Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g27700 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06 Identity = 43/181 (23.76%), Postives = 85/181 (46.96%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. ExPASy TrEMBL
Match: A0A0A0L2N4 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G563690 PE=4 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 1.1e-133 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. ExPASy TrEMBL
Match: A0A5A7TCE9 (Rhodanese-like domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00610 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128 Identity = 236/245 (96.33%), Postives = 242/245 (98.78%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. ExPASy TrEMBL
Match: A0A1S3B5W0 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486146 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128 Identity = 236/245 (96.33%), Postives = 242/245 (98.78%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. ExPASy TrEMBL
Match: A0A6J1EKQ2 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435449 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 3.0e-118 Identity = 216/245 (88.16%), Postives = 232/245 (94.69%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. ExPASy TrEMBL
Match: A0A6J1HVN6 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467261 PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 6.6e-118 Identity = 216/245 (88.16%), Postives = 231/245 (94.29%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. TAIR 10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 306.6 bits (784), Expect = 1.8e-83 Identity = 147/199 (73.87%), Postives = 178/199 (89.45%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. TAIR 10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 109.0 bits (271), Expect = 5.5e-24 Identity = 53/145 (36.55%), Postives = 89/145 (61.38%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. TAIR 10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 82.0 bits (201), Expect = 7.2e-16 Identity = 47/157 (29.94%), Postives = 79/157 (50.32%), Query Frame = 0
BLAST of CsaV3_4G031300 vs. TAIR 10
Match: AT4G27700.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 55.1 bits (131), Expect = 9.5e-08 Identity = 43/181 (23.76%), Postives = 85/181 (46.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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