CsaV3_4G031120 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G031120
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 21285378 .. 21285551 (-)
RNA-Seq ExpressionCsaV3_4G031120
SyntenyCsaV3_4G031120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACGACAAAAGGGATGCAGGGAAATGCACCACATGCATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGCAAAACCCTGGCAAAGAAACTTGCTATAACTACGGAGATAAGGAGCCATTAT

mRNA sequence

CTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACGACAAAAGGGATGCAGGGAAATGCACCACATGCATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGCAAAACCCTGGCAAAGAAACTTGCTATAACTACGGAGATAAGGAGCCATTAT

Coding sequence (CDS)

CTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACGACAAAAGGGATGCAGGGAAATGCACCACATGCATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGCAAAACCCTGGCAAAGAAACTTGCTATAACTACGGAGATAAGGAGCCATTAT

Protein sequence

LHMDWTTPNLLVQCLRRQKGCREMHHMHGSFMNIACACKTRKTLAKKLAITTEIRSHY
Homology
[Close]
BLAST of CsaV3_4G031120 vs. NCBI nr
Match: KAE8649706.1 (hypothetical protein Csa_012067 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 26 HMHGSFMNIACACKTRKTLAKKLAITTEIRS 57
          H HGSFMNIACACKTRKTLAKK AITTEIRS
Sbjct: 52 HAHGSFMNIACACKTRKTLAKKFAITTEIRS 82

[Close]
BLAST of CsaV3_4G031120 vs. NCBI nr
Match: KAE8649710.1 (hypothetical protein Csa_012088, partial [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 26  HMHGSFMNIACACKTRKTLAKKLAITTEIRS 57
           H HGSFMNIACACKTRKTLAKK AITTEIRS
Sbjct: 111 HAHGSFMNIACACKTRKTLAKKFAITTEIRS 141

The following BLAST results are available for this feature:
BLAST of CsaV3_4G031120 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649706.11.5e-0693.55hypothetical protein Csa_012067 [Cucumis sativus][more]
KAE8649710.11.5e-0693.55hypothetical protein Csa_012088, partial [Cucumis sativus][more]
BLAST of CsaV3_4G031120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G031120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G031120 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G031120.1CsaV3_4G031120.1mRNA