CsaV3_4G030880 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G030880
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Splicing factor-like protein
Location	chr4: 20904537 .. 20918243 (+)
RNA-Seq Expression	CsaV3_4G030880
Synteny	CsaV3_4G030880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTTGGATAAAATAAAAATGAAATCACTTTGTAAAATAAAATTAAAAGGAAAGAAAACCTAAGCAGTTCGTGGAAATAAAACAATTCCTTCGTCTGCGACGGCGCCACTTCGTCATTTCTCCATCTTCTTCGTTCTCCGTTTCAGCAACTAATTGTCGCCGCCGCCGCTCTCTCCCGTCCACTGCCACTGCCGTCTTTCTTGGTTCTTGACGTCATAGCATCCCTTTCCCAAATTGCTACTTGTTAAACTGGTATTCTCATTTTCTACTCCATTTTTGTTACGGGTATTCTCTCAATCTCCATCTATGTCTTCCTTCTCACTTGAAAAACACCAATTGTCACTTGTCTAATGAACAAATGGAGGAGTTCTTTTGATTATATATATATATATATATATATACACATATATTATAACAATAGCTAAATAGCAACCATAAAATACATTCTTTACGGCAAATTTATTTTTAATCAGTCATCCAATTCTCTTGTAATTCCTACCTTTATTGATTGATTGACCCAACTTCTTCAACTTTGTTTCTATTTGTATATTCGTCTATTATAATTGGGACTTGGGAGGATACGATTTTTTTTCTCTTTTAAAATGGAAATTCTCTCCCTCAATTAATCAATACAGTAACTAATTATACTTTAAATTTATGGAAATAAGAGCATGAATCCATTAATCTTTCTGATTGGAACGCGAATCAATTGCTGCGGGCGGGAAGTTCAAACCGTGTGGCCAGACATAATTTTCAATTATTAATTAGGAGTAGACGTTCAATCCATTGGTAATGAAGCTATCACCTGTTTTCTATGATGCGGATTATTTTTCTTCCGTATTGTTCCTTTTGTATACATTCTTCACAACTTCATTTCGTTCAACTCCTGTTCTACTGTCTGCATGAGCTCAAGCAATTCCGATACTCACATATGTGCGTACATATGTTTCTAGATATATGTATTATTCTGGTGAATTGTTTTTTGTTCCTGATATTTCAACTTGCACGTTTAAATCCATTTTATTTTAAAAGGATCAAATGTCTAAATTGTCGGTAGGGTTGCTTTACTGAAATGGGTTTGTGTGCTTATCTCTATTTCTTTTTGTAGGCATGGATAACAATTCCGTTGGGAACTTAGAAATGGTGACTGAAGCTGGATGGTATATTCTTGGTGAAAATCAGCAACATGTTGGTCCATATGCATTTTCTGAATTGCGTGGTGAGTTATGAGAACTGAACAAAACATACCTGTATATAGTAGCCAATTGATATTGTTCCAAGCATCACTTGTGGTTTTTGTTATTCGTGGGTGAAATAGATGAGTAACGTATTGGATTGGAATATACCTTGGTACCTCGATTCATGACAACTCTTCCTTATATCTTGTAAACTGCCGGTTATTCCTCAAATTTACTTCCAATCTTTCTTTCTTGAATTTCAGTTGTACAAGTAAACAATTGCACGCAGTATCATGTTCAATTGGTATAAGAGCTATTGAAACATCTATTTAGTTATTTATTCGCCCTGGGCAGAGCATTTTCTAAATGGGTATCTCCTGGAGAGTACACTGGCCTGGTCTGAAGGACAAAGTGAATGGCAGCCATTATCGTCCATTCCTGGGTTGACAACAGAAGTATATGGACAAGACTCTAATTTGCCAACTACAGGTGAAGTCATGTTTGTGTCTCATTAATTTTTTATGTGTAACTGGTCTAGTCAAATAATTGTGTAATGCTCATTAACTGTTTTAGTCCCTGCCAACAACAATGACGATGATGAGCTTGAGAAATATCAGAAAGAAGTTGGAGAAACAGAAGCCACAACGAAAGTGTCTAGTCCTTCTGGCGGCAGGAATTTTGGACTGGTGGAAGGTGATCTTGAGAGACCTACTACGCCACCAGAGGGTGAGGAGGAATTCACTGATGATGATGGGACTCCATACAAGTGGGACAGGGTTCTTAGGGCTTGGGTGCCTCAGGTATTATTCCTAGGAACCTTCTTCATGATGTGGGATTTGAGTTTGTAGTGTCTTATGTTTAACTCAAAAGTCATAAAAGTTTGAAACGGGAAATCAGTTGCCATGGCACTATAGATCAAAGTCTTCTTCTCTTGCCTTTCTATTTTTCTTTTATTTTTGTTTCTTCTATGCATAAGGTGGAATGATGAGAAATACAACCATAAACAGCAGTCTTTTTCTTTTCTTTTCTTTCCTTTTTTTGAAAAAGATATGGATCTCTTTATTAGTAAAATAATAAAGAGATAAAGCACTATGTACATGAGAGATATACAAAGAGCAATAAAACTATAAGAACGTAGGTGCACCGATACATCTCAACTAGGTTGACACCCCCCTAGTGCCCTCACCTTGTCCAAGAAACTACAAAATCAACTTTGACCTCTAGTTTTCGTGCAAGTCCTTATTTCAATGTTTGGTTGATCTTCTCCCGTAGGAGCGTTGGTCTTTACCTAGGACGGTGAGGTGTTTTACCTAACAAGTTCTTCACGACCATTCTAATATGTCGAATCTGCTTGCGAGAAAGTTGACTTCACTTGTGTTGCCTTTTTGTTGTATTCTTTGTTGGAAGGTGACTGTGAGAGTGTGGGTCATTTTGTGGGTCTTGTGGGGCGAGTGGAGTAGCCGGGTGTTTAGAGGGGGTGGAAAGGGACCCTAGTGATATTTAGTTCCCTGTTACATTTCATGTTTTCCTTTGGGCTTAAATTTCAAAGACCTTGTGTAATCATTCAATTGACACTATTTTGTATAGTTGGAGCTCCTGTCTTTAGAGAGATTCTCCTTTTTGTGGGCTTGGCTTTTTGTTGGACCTTGTATTCTTTCATTTTTTTCTCCATGAAAGTTCTTATTTCTAGAACATAAACTTTTTTTTACGAGATATGAAACTCTTCATCTAGTAAATGAAAAGAGATTAATGCTGAAGGATACAAACCCCGCACAAAGTGGGACGAAAGCAATAAAACATCAAACTGAATCATAGGAAAGCATAAAATAAAAGACTATGATGGACAGATGAAAGTATGGTTAAGGAAACCTAACAGAATTCGTAGTTTGGAGTGCGAAACTTGGACTTGTGAGAAAAGCAATAAAAGTACAGCAACAAAAATTACAAGAAAGCATAAACATAAAGAACTATGAAGGAAAGATAAAGGCACAATTAAGGAAACCAAACAGAAATTTGTAGTCTGGAGTGCAAAACTTGTGTAGTCTATTTGGTTTGTGTAGAACAATTAGTTTGAGCACATAACTTCATGTAGTTCTGGCTTTTGAATAATTTTGAATGATCTATTCATTTATTTGTTCAATGCTTGAGTAGTATCAATTATCAAACCAATATAATTTTTAATGACCTGACTTTGTAACAGGATGATGCATTTTTTAAACACGAGCAATATCGGCCGGAAGAGATGACTTTCATGCAAGAGGAAGAAGTATTTCCACAACTTGACGCAGATGCTCCATGCACCTCCATCAAGGAAGAAGGTGATTCTGTTCCTTCCACCTCCATTGAGGCAGATCATATCACAAAAGAAACTAACGGAAAAAGTGAGGAGACTGAAACCAAAAAGAATGTGAAGAGAAAATTGTCTGGCAATCAAGTTGAAAAAAAGGTTTTTCCTTGCATTGTATCGATAATTTATTTGAGAGTAGATGGGGGGCCATCTTAAAAAAATTGTTTGCCATTCTAACTTGGTTTTTTTTCTGCTTAATGAATGTCTTCTGCAGGAAGCAAATAAAGGTCCTGATGGTTGGTTTGAACTAAAAATAAATACACATGTTTATGTAACAGGGTTGCCAGAGGATGTTACTATTGATGAAGTATGTTTTAGGAGTGTACTAAGAGTTGTATCTTCGACCATTGTTTTCATTGTATGATGTAACTTTTTGTTATTATGTTGCAGGTTGTGGAAGTTTTTTCGAAGTGTGGAATAATAAAAGAGGTATTTATTGTTTGACATGTTATGCTAACATGAGTGGATAAATTCAACGTGTAGTGTCCTGGTTGTGTTGACTCCATATTTGATACATATTTTCTTATAGTGAAAAGTTCAATTCTGGCCCTGAGCTTGTCCAGTTTTATCAATTTCGACCCTAAACACACACTATTAAAAAACTTGTTACCACCTCACACTTAGCTTCTACTCATCATCATAGTTAATGCCAAGTACCTAATGATTACCTATGTTGACCTTTAAACCTGAAAAAAATGTCTTGGATTAACAGGACTATTTTTCCAAAGAGATTAAAATTCGTATCATTGGCTTCATAAACTAAAGATAAGTTTGTTAACCTATTTTGCTCACCTAAATTCCCTCCAGAATTTTACTCTCTATACCTCTCAATACTATTCTTCTCAAAATGTTCCCTTTGATCCCCCATTGCGACATGAATGCCATATCAGGGCTTACCATTGTCTCAAGCACCTAGCTTTTATTGATCACAGGTGATCTCTGTTTCAATCTCCTGCCACTTCATTACATTGAAACATCAAACCTACACTAACCATTTAAATGGATTGTTACACTGATCACCTAAAGGCTGAGAATAATAATAATCTTCATCTTACTCCTTTCCAAGAGCCATGTGGTTTTTTTAAAGATACAATTTAGGGTTAGCTACAAACTAGGAACAAAATCTAAATAATAACCAAATACCTAAAAGATCCAAATACAAAAGCTTAAATATCAACAAATCAATTTTACAATGTTAAATTAATAACAGTTATATATCACTCCTTTTTTACCCAGACCAATTCAATTCTTTAAGAGAGAATTCAGACAGTCTTCTATCAAAGCATTCCACAATAAGTTCAAGAAGCCAAATTATAAACAAAATTCAAAATTATGTCTATATGTGCCTTTTCCCTTCTGCCAATCAAGCTTCTTGCCCTGATCATGAGTGGGTCCGGCTAAATCTACAAGACCTATATGGGATTAGGTCTGGAGTGTTGATAGAGTCAAATCGCAAGGATCATACAAATATATTGACCCAAACCACTTTGAATGGGTTGGCTACAGGCCATGGCTATGACATTATGCATGTTTAGATCCTCAAAAATGTAGAGGTTGAAATTAAAACTAGCCCATGCTCCCACAGTTCCACGTTAATTGTAGTCCCAAAATTAAATTTCTTGTTTCAGAAACAACCCAGAAATTATTTGATGTAGTTCTAGCTTTTCTATTCAATCTTGATTCTTTGAAAAGTTTGATCCATTTTTTAGATTTAACTACCAATCTTCATTGTTTAAGAAGTTTTCATCCTTACACTAGGTTTCTTTCGCCACCCATCTTATAACACAAAAGTATGAAGAGACATGGACTCATCTTGTCAATTTATTTTTTGGAATATTACAAAGTTTATATATGGTAATTGGTCAGGGACTGCGTGTTTATCCTTCATCTTGACTCATCCCTATGGCGTTCCTACTGCTATCTATAGTATTTTCTAAATACACAAAATTCTTCTTATTTTCTATACAGATATACTACCCTCAATTTAAGGAGGGGAAAAGAATTATACAAGGAAAGATGAATAACGGTCATAAAGAAAAAATAAGGAAAACATTTTACATGAAAGATAAAATTCAAAGGTAAAAATTACTGAATTTAATGGGAGAATATTTCCTATATCCAACAGTGTCTTCATGAATGTATATCAGTATTAGATCATTCGCAATATGAAATGGCGTTTGAAAAAGTTTTGAGTTGCACTGGTTAGCAAAGATTCTTTATTTCAGTGCAAGTGGTGTATGCTATTGATTGAAACATGTCTTGTATTTTGAATATATGGTTCTCTTACAAATGTGTTCTGTTCTTCTAAAATGTGGTTATTTATTTATTTTTCAGGATCCTGAAACCAAAAAACCTCGTGTTAAGTTGTATGTTGATAGAGAGACGGGGAAGAAGAAGGGTGATGCTTTAGTCTCCTATATGAAGGTAATTTTGTCATGCGTTGGTCTCTTATTTCCTGTCCTCCTAGTATAGTTGCTAAGTGATATTATCTTTTGGACTCAAATGGTATACTCTGTGTTTGCTTGCATAGGAACCTTCTGTTGCGCTGGCTATGCAAATTTTGGATGGCACACCTCTTCGTCCAGGTGGTAAAATGCTAATGTCTGTTACTCAAGCTAAGTTTGAACAAAAAGGTGTTGTTTACTTCCTAACTATTCATTTCTTAACATCTCGCACATTTTTTTTCTTTACTTGCTAGAAATCTTTGGCCTTCATTGTTGTGACAACCAAGCGCCTTGTTATTAACATTTTATTTTATTTGATGAACTTTTACAAGCAGGGGATAAATTTGTATCCAAAAAAGTAGACAACAAGAAGAAAAAGAAGCTTAAAAAAGTTGAAGATAAGATACTTGGCTGGGGTATGTGTTTAGTTCCTAAAAGATTTTCACTTTTTCCTAGTATTGAACATGTAAAGAACATTCTATATTTGGATTATTTATATTGTTATTCTTACTTTTATAATAGCACTTTTTTATTCATAGCATGTAAGTTAGGCTATCAGTGTTTCTTTTCTGTTCCGTGAGTGTTGTGCTAGATACGTCAGATTCTAAACAGCTTCATCACTTTACTTTGATAATTGAGAGCTGGGGTTTAAATCCTTGGATATTGATCTACATGTGTTTGGATAGGATCCATGCTTTAATAATAAGCCTCATGAGAAGGTATAAAGATAGTTAGACTGGATTTTAGGAGACCACTGTTAGAATTCGGACAATAGATGAATTATATATCCTTTGTTCAAAAGGGGTGTAAAAGGAACGGGATGGAATAAAGTAGGTACAAATTGAGAACGGATTCATTACCATTTGACCCAGTACAGAAGGATTTTCCTAAGTCATCCCGTCCCCCTGGCTCAGCTTCTCCTCCTTTCCTTCTAACCGTTTCTTTGGGAATAGTTTCTCATAAAAAAGTCTGTTGGGAATAATTTCTGTTGGGAATAATTTCGCTTTTCTTTTGCTTCTTATTTTGTGTAGGTGGGCGAGACGATGCAAAAGTTTCAATTCCTGCAACTGTTATTCTTCGTTTTATGTTCACACCTGCTGAAATGAGGGTTAGTTCTATAAACTTTTCTGTTTTCTCCCAGTAATTACGTTCCAACAAGTGATAAGATAATGATAGATGTATGTTATTTTATTCCTTTCTATTGGAAATAAGGAGCTTTGTTGATAGTTTATAGCCCCGTATTTTACTTTGCCCTAAATTTATTTTAAGGCTTGCTAACCTTTAAAATTGTCTTCTCTTGTAACTTTTATTGTGCATGAAAATAATAAATGACTATCGCTGTTTTTTCTCCCTGGTTTAGTGTTTTTTTATGTAAACCTTGTGTTCTCTTTTCTACCATTTAACATGGTATTAGAGTGTGGTGACGAAACCCTAGCTGCCATTGGCAAAAACCAAATTGTGCAAGATAACCTTATTTCTGCACCAGTCTTGCTTCAGCCACAGCTGCCACCAGAACCACAGCCATTGGAGATGTCGATTTTTCCGCTGTGATCACTGCCACTGCTGTCTAAGCTGCTGTTGATGGATATCTTTGGTCCTTGCTTATCTGTCCAATTCTAGTGCAGCCACAACCCTTTGATAAAAACCTTAGCTGAAACATACACCATGAAAGATTAACAAAATGAACAAAAATATTTAAGAAATATAGCAAAATCTCATATTCAATCAAGGTTACACATTGATAGACTTTTGTTAGCGTCTATCATTGACATTGATACTAATAAAAATTATTGACATTAATAGATGCCGATAGAGGCGGCGTCTAATAGAATTTGAAGTTTGGCTATATTTTGTAAATTTTTTTTAGTCATAAAATTTAAATTTAAAATGCTGTTTATTTATTTTATTTATAGATCATTAGGAATACATGTGTATGTTAATTTTTGGGGAAAAAACCTTTTTGGTCTTTAAATTTTGGGTCTAGTTTTATTTGGTTCTAAGTTCTAGTTTCTATTTGGTTCTAAGTTCTAGTTTCTATTTGGTTCAAAGTTCTAGTTTCTATTTGGTTGTAAGGTTTCAAATTGTAATGCCAAAGCTTTTATGTTCTGAGTTTATTTCAATTTACTCACTAGAAATGTTCTAACTTCAACTATATTTGAGTATTATTTTGATCCATGAGTTTCAAGCTTCACTCTTAACTCTGATTTTTAGTGTTGATCCTATTAATTGATTTTAAAAATTAAAATAAATATAATTAATTTTCACTACTTTTTATCTCCATTAAAAATAATTTTCAAATTTCACTTCTTAATTATTTTGAATGATTTGATAAATATTAACACCAAAGGTTGAAATGAATTTTTAGTAATTGAGGTTAGAAGTGTAAATCTTGAAATTTAGGGTTCAAGATGAAACAAAACTCAAATCTTGAGGTAAAATTGTAACATTTTGAATCTTAGGGGCTAAATTGAAATCAAACTCAAAACTTAAACACTAAAAGTGGTGTTTAGACAAAAATTCTAAAATGCATAATGCCATAAGTCAGAAAAAGAAAAACATTGAACTAAAGAGGCATCTATACTAGGACTTTTCAACACTTGCAAAATTAACGCAGCACTGCTGCTTTAGTTTAAAGGAAATAAAGTTACTAACTGGTAACTCTAAAAAATTACAGCAAGAGAAGAAAACACAACACTATTAAAAGAATAAACTACATAAAAAAGCTCCCAAAGAACTACATAAAAAATTTTAACATTTTGTAAACTAAGAACCAAATGGAAACTAAACCTACAACCAAGACATTTTTCTTTTAGTTCTACCATTTAGCCTGATATTATTATTACCCATTTTTACGAACACCAGAAACCTGTCTGTTAGCTTAGTCTACTGTCAGTCTTTCCTTTTAAATTATTTTCTGAACATAAACAGTATATGTGTATGTTCATATATAGATCGGTTAATTGTTGTGTATGATTTCCAAGTTAAATAGTTTCTAATTTGACTGAATATATTTGGACAGAAGCTAAGGGTAAAAACCTTGTAATATAATGTAATTATTGATGAAACAATTGGTTCTTGTTTTGCATTTTGAATGACAAGTAGAACATTGTATTTTCTAGGCCGATGAGAATTTAGCTTCAGAAATCGAAACAGATGTCAAGGAGGAAAGCACAAAATTTGGTCCTGTGGATTCAGTTAAGGTAATTAAACTTTTTTCCCCTTTCCGCGTTTTGGTCTTTCTGTTAATAAATTACTATTATTCTGAAAAGAAAAATGCTATCAAGATAATGTGAGTCTTTGCAGGGATTTAGCATATAGAAAATAAAGTTGTGGCCAGTTTGTCTTAACCTTAGTTCTTGAGCATCGGCATGCCTGCCATTGGCTCCCGCTTTGGGGCGGCCTAGCTCCTAAAATCTAGCATCTTCCCCACTATATTATAAGTCGCTATGGGGGGATGTCCAAACACACACACATTCTATCATTTTCACGAGTAGAGAAGAGAGTGTGACTCTCCTATTGTACTTAAGTCTTGTATAGTGCTAAGTGGTTTTTATATCAAATAAAGTGATATTTCACTATCCTCTTCTCCTTCCTTAATTTTCCCATAGTGTGAATGCCTTATCCGAACAATCCAATCTAGGGATTGTGCCTTGCTGTGAGGGACGTACCCATGGAGTGTTTCTTTGGGCCAAGTAAGTTTGAAGGTTGGTCAAGGCTTGGCTTGACGTCGCACGGGGCACAAGTGCCAACTGCACATCAACCAGCGCAAGCTTCCGAAAACCTCCTTAGCTCGCTCACCCTTTGGGTTTCGCACCCCACTTTGCTGTGCTGCCTGTTAAAAGTGGTATCAGTGCCTACGTTATAAAACTATTTTATTCATTTGAGTGCCCTACTCACATCACTCTTATAACGGTTGACAAATTCATCCACAGTTCCTTGAATGGAGGAAGAACCACACAACTGTGAAGAAGTGCTAGATTTGGTCTTGTATCCCATGAGCCTCTCCATGGCTTGAACTTTCTTCTTCACAGCTCTAAGCCCACCTCGTTAATGACTTTTAATTTGTTGATCCTCATTTCTTGGACCTAGGCTATATGATGACACTCATATGACCAACCGTTGGAGAGGTAGTCCTTCGTGCACATCTCTTCGGCGGCGAAGAGATCTTGGACTGTCACTTCTTCATAGTTGTGTGGTTATTCCTCCATTCGAGTAACTGTGGACATAATTATCTCGATTTTGTCAGCCATTATAACAGTGAGGTGAGTAGGGCACTCAAATGAGTTAAAGAGCTTTATAACGTGGGCTTTGATACCACTGTACATAGGCGGCACAATGGAGTGGGGTGTGCACGCTTAGGAGGTTTGTGGAAGCGTCGTTGGTTGATGTGCGGATGGCACTTGTGGCTCGTGCGACATCAAGGCAAGCCTTGACCAACATTCAAACTTGTCCAAAATAAAACATTCTACAGGTAAGTTCCTCATGGTAAGCATAATTCCTAGATTGAGTTGTTTGGTTAAGGCAATCACACTTTGAGAATTAAGGAAGGAGAAGAAGCTGATAGTGATAGTATCTTTTTATTTGATATAAACACCACTTGGCACTATACCAGTAGGAGAGTCATACCCTCCTCATGAAAATGAAGAATGTGTGTGTGTTTGGATAACCCCTAAAGCACACTTATATAATGGGGGAAGATGCTAGGTTTTAGGAGTTAGTAGGGTGAAAACCGCTCACAACCCATTTCTTGAGGACCACTTAACATGTTCCCACTATTTCCATCCTTTTGCGAAGGGAACATGTCCATTACTTCCTTCAATTTAGCACGTCCGCTCCGTTTACTATTTTTAAACCCAACTTCCCTCAATTGCATGCTCCACCTTCCATCATGGTTAAAGGGTCTAGGGAAGTTTCCAAATGTGCCTCATTGCTTAATGACATAGGAATAGGATTGCCATATTGCTTGGAAAACCCACATCTGCCAACTCGAGCTCTGGGTGCATCATCTCCCTTGCGCATGCTCCATGGCTTGAATGCTTGGCGCGTATGTTAGGTGTCAGCACGCTCGCCTGGCATGTGCACGTGTGGCCGACATTGCCCATCCTGTGCAGTGTTGTGCCCCTCTTGGGGCCTTGCTTGTGCTTGCGCAAGGGTCTTGTCCATTGTCACAATCGCAAACTTTCAAATTCGGGACGAGCGATTGTGCGGCACTTGTTCGACCCAGTCAACAAGTCAGCTGATCGAAATCCAAAAACCGCAGACAAACTCACGGTATGATTCAGCCTCCCATCGTGTTCTTCAGAAAATATTTTTAAAAAATGTGAGAGAAAACAATTCATTGAAATAAGCGTTATAATATGCAATGAAGACTGTTAGTTGCAAGGGAAAAAGGTTTGCTTGCAAAGGGTGGGGATTCAACTACTATGTCTCTCCTATAGTATGTGTTGGACTTTTTTAGCTCGGGTAGGCTTGCATATGAAAAAGCCGAAATGTCATCCTATAGATTTATTACATAAAAAGGAAAGCAACTAGTTAAACTAAACATAAGACATAAAGATAAGATAAATCGAGGGTATTTGAGCATACGGCCATAGGCAAACATCGCCCTGGACAAGTATGCTCCTTACATTCTCCCCCACTTAAACAATTGACATTCTTATCGACTGGTGAAACTTGAACTCTTCGATCTTCTGCGTCCAGGCTTCTAGGTCTTTGACACGTTCCCAACTAGTTTCTTCCACAGGAAGGTTCTTCCACCTTACCAAGTACTTGTGGATCCTTCTTGTAGGTCTTCGGCCCTTCCTCACTCACTCGGCCAAGATTTCTTAAACTTCTTTATTCTCTTTCTAATTGAGGTCGATGGTTGGTCGGACTATGACATTACGCTGCATGTCATCAGGATCTTGATGGTAGAGCTTCAAGTTACTCACATGAATTAGTGGGTGAATTTTCATCCATGTGAGCAATGCTACTTTGTAAGATGTACTCCCTACCCTTTTCGGCACTTCCACTCCCTTGTATTTGCTCACAAGGCGTTGGTCTTTGCGTTCCCGCAATCGAATCTGTTCCGATCGTAATTTGATGAGGACCCGATCTCCCGCCCGAAACTCAAGGGGGCGATGCTTCTTATCTGCCCACTTCTTCATCCGCTTCGAGGCTTTCTATGCCCGAAACTCAACAGGGCGATGCTTCTTATATGCCTCTTGCGCATACATGTACCTTGTCCTCAGCACGGGGCGTCGGCCTCCAACTCACACTGCACGTGGATGCGTGCTAACCTCCTTTTAGTACACGTAGCCTCCTAGGTTTAAGGTACAAGAGTTCTTTGTTGATAATATTTGATTTTTTTTTCCTTTGGTTTTGGTTGGATACAGGTATGTGAAAACCATCCACAAGGTGTGGTTCTAATAAGATTCAAGGATAGAAAGGATGCGCAGAAATGTATAGAGTTGATGAATGGCAGATGGTAATACATTTTGCTGTTTCTTTAGTTTTCCTTTTTTCAGAAGCTAATTCTTTTTGGTTTAAATCTCTTTCTTTTTTCCATACCAATAAGAGCTTAATATCTTGGTTTTTAAACTCTAATTGCCAACGATTTTGATTTTAGTTTATGATTTTGGAAATTCTGTTTCTTTTTTTCTTCTTTTAATAAAAAGAGATACAATGTTCAAGGATACATAAAGAGATCATAACTTCTTTACTTTAATTCTTATCTCATTGTCTCGAAGAAACGCTTGACCTCTGAAACCAAATATTACAAAATCAAGTTTATAATTGTTTTTTCCCTTTTTTTTTTTAATTTTATTTTTAAGTTTCCGAACTTGGGTTAGATTTTGAAAGTTTAGGGAGTTGGAACCATATAAAGAAATTCCTCAGTTTAGTAACATTTATGAACTTTATTTTACAAGCAAAAAACCAAAACCAAATGGTTATAAAATGTGTTGTAGTCCTTGAACTTTTACGCTAAACATTTGATATGACATTCCCAAATAGTTTGTTTTTTAGAGTGGAGGATTGAAATGAACGTTTTCAATAATCTTAGGATAACAATTAAATAAGACTAGAGAAGTTTCAGATCATATTGTACATTTTAGAAGCTCGTAAACTGAAACGAAAATGGAAAGTAAAATTGCTTTGATGGTGGAGAGGGAGTATATTTTGAAGATGGCTTACAGTTAATAATGATTTGGACAGGTTTGGAGGAAAACAAATTCATGCAAGTGAGGACGATGGTTTAGTGAACCATGCCATGGTGAGGGATCTTGAAGCAGATGCTGCTCGCTTGGAGCAGTTTGGTTCTGAACTAGAGGCTGACTAACTCACTTCCTCTATTTGCCTCTAAAATGCTCAATACTTTAGTTAAATTTTTATAATTAAACACTACATGTCTGTATGAAAACACTTACCTTTTTGTACATTATTATACTCGCATTAATATGCCCTTCCTAATGTTGCAACTACAACTCCTCACCTGCTGTAAAGGAAAAATTTTCTCCATTTAGATTTGTTTTCTATTAATCTATTTCTGAAGTAGGGGGGAAAAACACCATTTTTCTTACCCAACATTTAGGTTCAATTGTTGGTTGGGATTTGCTTTTTAATCAAGGATATAAACTGCGTTTATCATAAACTAATGTGGAAAAATATGTTAAGAGTAGTAGTAAGACAAAGTACAAATGGGGTGAAGTTCATGAGAAGTTGGAAAGTTTAATGAAATATGATTTTATAAAGAAGGC

mRNA sequence

ATGGATAACAATTCCGTTGGGAACTTAGAAATGGTGACTGAAGCTGGATGGTATATTCTTGGTGAAAATCAGCAACATGTTGGTCCATATGCATTTTCTGAATTGCGTGAGCATTTTCTAAATGGGTATCTCCTGGAGAGTACACTGGCCTGGTCTGAAGGACAAAGTGAATGGCAGCCATTATCGTCCATTCCTGGGTTGACAACAGAAGTATATGGACAAGACTCTAATTTGCCAACTACAGTCCCTGCCAACAACAATGACGATGATGAGCTTGAGAAATATCAGAAAGAAGTTGGAGAAACAGAAGCCACAACGAAAGTGTCTAGTCCTTCTGGCGGCAGGAATTTTGGACTGGTGGAAGGTGATCTTGAGAGACCTACTACGCCACCAGAGGGTGAGGAGGAATTCACTGATGATGATGGGACTCCATACAAGTGGGACAGGGTTCTTAGGGCTTGGGTGCCTCAGGATGATGCATTTTTTAAACACGAGCAATATCGGCCGGAAGAGATGACTTTCATGCAAGAGGAAGAAGTATTTCCACAACTTGACGCAGATGCTCCATGCACCTCCATCAAGGAAGAAGGTGATTCTGTTCCTTCCACCTCCATTGAGGCAGATCATATCACAAAAGAAACTAACGGAAAAAGTGAGGAGACTGAAACCAAAAAGAATGTGAAGAGAAAATTGTCTGGCAATCAAGTTGAAAAAAAGGAAGCAAATAAAGGTCCTGATGGTTGGTTTGAACTAAAAATAAATACACATGTTTATGTAACAGGGTTGCCAGAGGATGTTACTATTGATGAAGTTGTGGAAGTTTTTTCGAAGTGTGGAATAATAAAAGAGGATCCTGAAACCAAAAAACCTCGTGTTAAGTTGTATGTTGATAGAGAGACGGGGAAGAAGAAGGGTGATGCTTTAGTCTCCTATATGAAGGAACCTTCTGTTGCGCTGGCTATGCAAATTTTGGATGGCACACCTCTTCGTCCAGGTGGTAAAATGCTAATGTCTGTTACTCAAGCTAAGTTTGAACAAAAAGGGGATAAATTTGTATCCAAAAAAGTAGACAACAAGAAGAAAAAGAAGCTTAAAAAAGTTGAAGATAAGATACTTGGCTGGGGTGGGCGAGACGATGCAAAAGTTTCAATTCCTGCAACTGTTATTCTTCGTTTTATGTTCACACCTGCTGAAATGAGGGCCGATGAGAATTTAGCTTCAGAAATCGAAACAGATGTCAAGGAGGAAAGCACAAAATTTGGTCCTGTGGATTCAGTTAAGGTATGTGAAAACCATCCACAAGGTGTGGTTCTAATAAGATTCAAGGATAGAAAGGATGCGCAGAAATGTATAGAGTTGATGAATGGCAGATGGTTTGGAGGAAAACAAATTCATGCAAGTGAGGACGATGGTTTAGTGAACCATGCCATGGTGAGGGATCTTGAAGCAGATGCTGCTCGCTTGGAGCAGTTTGGTTCTGAACTAGAGGCTGACTAA

Coding sequence (CDS)

ATGGATAACAATTCCGTTGGGAACTTAGAAATGGTGACTGAAGCTGGATGGTATATTCTTGGTGAAAATCAGCAACATGTTGGTCCATATGCATTTTCTGAATTGCGTGAGCATTTTCTAAATGGGTATCTCCTGGAGAGTACACTGGCCTGGTCTGAAGGACAAAGTGAATGGCAGCCATTATCGTCCATTCCTGGGTTGACAACAGAAGTATATGGACAAGACTCTAATTTGCCAACTACAGTCCCTGCCAACAACAATGACGATGATGAGCTTGAGAAATATCAGAAAGAAGTTGGAGAAACAGAAGCCACAACGAAAGTGTCTAGTCCTTCTGGCGGCAGGAATTTTGGACTGGTGGAAGGTGATCTTGAGAGACCTACTACGCCACCAGAGGGTGAGGAGGAATTCACTGATGATGATGGGACTCCATACAAGTGGGACAGGGTTCTTAGGGCTTGGGTGCCTCAGGATGATGCATTTTTTAAACACGAGCAATATCGGCCGGAAGAGATGACTTTCATGCAAGAGGAAGAAGTATTTCCACAACTTGACGCAGATGCTCCATGCACCTCCATCAAGGAAGAAGGTGATTCTGTTCCTTCCACCTCCATTGAGGCAGATCATATCACAAAAGAAACTAACGGAAAAAGTGAGGAGACTGAAACCAAAAAGAATGTGAAGAGAAAATTGTCTGGCAATCAAGTTGAAAAAAAGGAAGCAAATAAAGGTCCTGATGGTTGGTTTGAACTAAAAATAAATACACATGTTTATGTAACAGGGTTGCCAGAGGATGTTACTATTGATGAAGTTGTGGAAGTTTTTTCGAAGTGTGGAATAATAAAAGAGGATCCTGAAACCAAAAAACCTCGTGTTAAGTTGTATGTTGATAGAGAGACGGGGAAGAAGAAGGGTGATGCTTTAGTCTCCTATATGAAGGAACCTTCTGTTGCGCTGGCTATGCAAATTTTGGATGGCACACCTCTTCGTCCAGGTGGTAAAATGCTAATGTCTGTTACTCAAGCTAAGTTTGAACAAAAAGGGGATAAATTTGTATCCAAAAAAGTAGACAACAAGAAGAAAAAGAAGCTTAAAAAAGTTGAAGATAAGATACTTGGCTGGGGTGGGCGAGACGATGCAAAAGTTTCAATTCCTGCAACTGTTATTCTTCGTTTTATGTTCACACCTGCTGAAATGAGGGCCGATGAGAATTTAGCTTCAGAAATCGAAACAGATGTCAAGGAGGAAAGCACAAAATTTGGTCCTGTGGATTCAGTTAAGGTATGTGAAAACCATCCACAAGGTGTGGTTCTAATAAGATTCAAGGATAGAAAGGATGCGCAGAAATGTATAGAGTTGATGAATGGCAGATGGTTTGGAGGAAAACAAATTCATGCAAGTGAGGACGATGGTTTAGTGAACCATGCCATGGTGAGGGATCTTGAAGCAGATGCTGCTCGCTTGGAGCAGTTTGGTTCTGAACTAGAGGCTGACTAA

Protein sequence

MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLVEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEVFPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEAD*

Homology

[Close]

BLAST of CsaV3_4G030880 vs. NCBI nr
Match: XP_011653887.1 (splicing factor U2AF-associated protein 2 isoform X2 [Cucumis sativus] >XP_011653888.1 splicing factor U2AF-associated protein 2 isoform X2 [Cucumis sativus] >KAE8649734.1 hypothetical protein Csa_012481 [Cucumis sativus])

HSP 1 Score: 993.8 bits (2568), Expect = 5.3e-286
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60
           MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP
Sbjct: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60

Query: 61  LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV 120
           LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV
Sbjct: 61  LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV 120

Query: 121 EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV 180
           EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV
Sbjct: 121 EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV 180

Query: 181 FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE 240
           FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE
Sbjct: 181 FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE 240

Query: 241 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 300
           ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET
Sbjct: 241 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 300

Query: 301 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 360
           GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK
Sbjct: 301 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 360

Query: 361 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 420
           KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF
Sbjct: 361 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 420

Query: 421 GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD 480
           GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD
Sbjct: 421 GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD 480

Query: 481 LEADAARLEQFGSELEAD 499
           LEADAARLEQFGSELEAD
Sbjct: 481 LEADAARLEQFGSELEAD 498

[Close]

BLAST of CsaV3_4G030880 vs. NCBI nr
Match: XP_031740498.1 (splicing factor U2AF-associated protein 2 isoform X1 [Cucumis sativus] >XP_031740499.1 splicing factor U2AF-associated protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 986.9 bits (2550), Expect = 6.5e-284
Identity = 498/505 (98.61%), Postives = 498/505 (98.61%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELR-------EHFLNGYLLESTLAWSE 60
           MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELR       EHFLNGYLLESTLAWSE
Sbjct: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELRVIYSPWAEHFLNGYLLESTLAWSE 60

Query: 61  GQSEWQPLSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSG 120
           GQSEWQPLSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSG
Sbjct: 61  GQSEWQPLSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSG 120

Query: 121 GRNFGLVEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMT 180
           GRNFGLVEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMT
Sbjct: 121 GRNFGLVEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMT 180

Query: 181 FMQEEEVFPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSG 240
           FMQEEEVFPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSG
Sbjct: 181 FMQEEEVFPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSG 240

Query: 241 NQVEKKEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVK 300
           NQVEKKEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVK
Sbjct: 241 NQVEKKEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVK 300

Query: 301 LYVDRETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVS 360
           LYVDRETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVS
Sbjct: 301 LYVDRETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVS 360

Query: 361 KKVDNKKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDV 420
           KKVDNKKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDV
Sbjct: 361 KKVDNKKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDV 420

Query: 421 KEESTKFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLV 480
           KEESTKFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLV
Sbjct: 421 KEESTKFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLV 480

Query: 481 NHAMVRDLEADAARLEQFGSELEAD 499
           NHAMVRDLEADAARLEQFGSELEAD
Sbjct: 481 NHAMVRDLEADAARLEQFGSELEAD 505

[Close]

BLAST of CsaV3_4G030880 vs. NCBI nr
Match: XP_008442163.1 (PREDICTED: splicing factor U2AF-associated protein 2 [Cucumis melo])

HSP 1 Score: 961.1 bits (2483), Expect = 3.8e-276
Identity = 479/498 (96.18%), Postives = 489/498 (98.19%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60
           MDNNSVGN EMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP
Sbjct: 1   MDNNSVGNSEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60

Query: 61  LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV 120
           LSSIPGLTT+VY QDSNL T VPANNN+DDELEKYQKEVGETEAT +VS PSG RNFG+V
Sbjct: 61  LSSIPGLTTKVYEQDSNLSTAVPANNNEDDELEKYQKEVGETEATAEVSGPSGSRNFGMV 120

Query: 121 EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV 180
           EGDLERPTTPPEGEEEFTDDDGT YKWDRVLRAWVPQDDAFFKHEQYRPE+MTFMQEEEV
Sbjct: 121 EGDLERPTTPPEGEEEFTDDDGTTYKWDRVLRAWVPQDDAFFKHEQYRPEDMTFMQEEEV 180

Query: 181 FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE 240
           FPQL+ADAPCTSIKEEGDSVPSTS+EADH+TKETNGKSEE ETKKNVKRKLSGNQVEKKE
Sbjct: 181 FPQLEADAPCTSIKEEGDSVPSTSVEADHVTKETNGKSEEIETKKNVKRKLSGNQVEKKE 240

Query: 241 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 300
           ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET
Sbjct: 241 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 300

Query: 301 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 360
           GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK
Sbjct: 301 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 360

Query: 361 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 420
           KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF
Sbjct: 361 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 420

Query: 421 GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD 480
           GPVDSVKVCENHPQGVVLIRFKDR+DAQKCIELMNGRWFGG+QIHASEDDGLVNHAMVRD
Sbjct: 421 GPVDSVKVCENHPQGVVLIRFKDRRDAQKCIELMNGRWFGGRQIHASEDDGLVNHAMVRD 480

Query: 481 LEADAARLEQFGSELEAD 499
           LEADAARLEQFGSELEAD
Sbjct: 481 LEADAARLEQFGSELEAD 498

[Close]

BLAST of CsaV3_4G030880 vs. NCBI nr
Match: TYK02750.1 (splicing factor U2AF-associated protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 961.1 bits (2483), Expect = 3.8e-276
Identity = 479/498 (96.18%), Postives = 489/498 (98.19%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60
           MDNNSVGN EMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP
Sbjct: 51  MDNNSVGNSEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 110

Query: 61  LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV 120
           LSSIPGLTT+VY QDSNL T VPANNN+DDELEKYQKEVGETEAT +VS PSG RNFG+V
Sbjct: 111 LSSIPGLTTKVYEQDSNLSTAVPANNNEDDELEKYQKEVGETEATAEVSGPSGSRNFGMV 170

Query: 121 EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV 180
           EGDLERPTTPPEGEEEFTDDDGT YKWDRVLRAWVPQDDAFFKHEQYRPE+MTFMQEEEV
Sbjct: 171 EGDLERPTTPPEGEEEFTDDDGTTYKWDRVLRAWVPQDDAFFKHEQYRPEDMTFMQEEEV 230

Query: 181 FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE 240
           FPQL+ADAPCTSIKEEGDSVPSTS+EADH+TKETNGKSEE ETKKNVKRKLSGNQVEKKE
Sbjct: 231 FPQLEADAPCTSIKEEGDSVPSTSVEADHVTKETNGKSEEIETKKNVKRKLSGNQVEKKE 290

Query: 241 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 300
           ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET
Sbjct: 291 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 350

Query: 301 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 360
           GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK
Sbjct: 351 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 410

Query: 361 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 420
           KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF
Sbjct: 411 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 470

Query: 421 GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD 480
           GPVDSVKVCENHPQGVVLIRFKDR+DAQKCIELMNGRWFGG+QIHASEDDGLVNHAMVRD
Sbjct: 471 GPVDSVKVCENHPQGVVLIRFKDRRDAQKCIELMNGRWFGGRQIHASEDDGLVNHAMVRD 530

Query: 481 LEADAARLEQFGSELEAD 499
           LEADAARLEQFGSELEAD
Sbjct: 531 LEADAARLEQFGSELEAD 548

[Close]

BLAST of CsaV3_4G030880 vs. NCBI nr
Match: XP_038882575.1 (splicing factor U2AF-associated protein 2 isoform X3 [Benincasa hispida])

HSP 1 Score: 932.6 bits (2409), Expect = 1.5e-267
Identity = 470/500 (94.00%), Postives = 483/500 (96.60%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60
           MDNNSVGN EMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP
Sbjct: 6   MDNNSVGNSEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 65

Query: 61  LSSIPGLTTEVYGQDSNLPTTVPA-NNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGL 120
           LSSIPGLT +VY QDS+L T V A NNNDDDELEKYQKEVGETEAT +VSSPSG RNFG+
Sbjct: 66  LSSIPGLTVKVYEQDSHLSTAVAANNNNDDDELEKYQKEVGETEATVEVSSPSGSRNFGM 125

Query: 121 VEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEE 180
           VEGDL+RPTTPPEGEEEFTDDDGT YKWDR LRAWVPQDDAFFKHEQY PEEMTFMQEEE
Sbjct: 126 VEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQDDAFFKHEQYGPEEMTFMQEEE 185

Query: 181 VFPQLDADAPCTSIKEEGDSVPSTSI-EADHITKETNGKSEETETKKNVKRKLSGNQVEK 240
           VFPQL+ADAPCTSIKEEGDSVPSTSI E DH+TKE NGKSE+ ETKKN KRKLSGNQVEK
Sbjct: 186 VFPQLEADAPCTSIKEEGDSVPSTSIKEEDHVTKEANGKSEDIETKKNGKRKLSGNQVEK 245

Query: 241 KEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDR 300
           KEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDR
Sbjct: 246 KEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDR 305

Query: 301 ETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDN 360
           ETGKKKGDALVSY+KEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDN
Sbjct: 306 ETGKKKGDALVSYLKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDN 365

Query: 361 KKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEEST 420
           KKKKKLKKVEDKILGWGGRDDA+VSIPATVILRFMFTPAEMRADENLASEIETDVKEEST
Sbjct: 366 KKKKKLKKVEDKILGWGGRDDAQVSIPATVILRFMFTPAEMRADENLASEIETDVKEEST 425

Query: 421 KFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMV 480
           +FGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGG+QIHASEDDGLVNH+MV
Sbjct: 426 RFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGRQIHASEDDGLVNHSMV 485

Query: 481 RDLEADAARLEQFGSELEAD 499
           RDLEADAARLEQFGSELEAD
Sbjct: 486 RDLEADAARLEQFGSELEAD 505

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy Swiss-Prot
Match: Q8BGC0 (HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.1e-39
Identity = 126/385 (32.73%), Postives = 192/385 (49.87%), Query Frame = 0


Query: 121 EGDLERPTTPPEGEEEFTDD--DGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEE 180
           EGD +     P GE        D TPY+WD   +AW                        
Sbjct: 28  EGDTQ---NEPSGEAHSLGQPPDDTPYEWDLDKKAW------------------------ 87

Query: 181 EVFPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEK 240
             FP++  D   T     G S    S    ++ ++ N K+ E   +K V    + +   K
Sbjct: 88  --FPKITEDFIATYQANYGFSSDGASSSTANV-QDANTKAVEEPPQKEVPE--TPDSKRK 147

Query: 241 KEANKGPDGWFELK--INTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYV 300
            E  K   GWF ++   NT+VYV+GLP D+T+DE +++ SK GII  DP+T++ +VKLY 
Sbjct: 148 GEKRKAESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYK 207

Query: 301 DRETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKV 360
           D + G  KGD L  Y+K+ SV LA+++LD   +R G K+ + V  AKF+ KG+   SKK 
Sbjct: 208 D-DQGNLKGDGLCCYLKKESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKK 267

Query: 361 DN-KKKKKLKKVEDKILGWGGRDDA---KVSIPATVILRFMFTPAEMRADENLASEIETD 420
              K  KK   ++ K L W     A   ++     VIL+ MF P +   D  + +EI  D
Sbjct: 268 KKCKDYKKKLSLQQKQLDWRPERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNEIRED 327

Query: 421 VKEESTKFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGL 480
           ++ E +KFG +  + + + HP GV  + F++ ++A  CI+ ++GRWFGG+QI A   DG 
Sbjct: 328 LRVECSKFGQIRKLLLFDRHPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQAWDGT 376

Query: 481 VNHAMVRDLEADAARLEQFGSELEA 498
            ++ +         RL  + + L A
Sbjct: 388 TDYQVEETSREREERLRGWEAFLNA 376

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy Swiss-Prot
Match: O43719 (HIV Tat-specific factor 1 OS=Homo sapiens OX=9606 GN=HTATSF1 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.5e-38
Identity = 116/366 (31.69%), Postives = 180/366 (49.18%), Query Frame = 0


Query: 143 TPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEVFPQLDADAPCT-----SIKEEG 202
           TPY+WD   +AW                          FP++  D   T         +G
Sbjct: 48  TPYEWDLDKKAW--------------------------FPKITEDFIATYQANYGFSNDG 107

Query: 203 DSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKEANKGPDGWFELK--INT 262
            S  + ++E  H         E+     + ++        K E  K   GWF ++   NT
Sbjct: 108 ASSSTANVEDVHARTAEEPPQEKAPEPTDARK--------KGEKRKAESGWFHVEEDRNT 167

Query: 263 HVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRETGKKKGDALVSYMKEP 322
           +VYV+GLP D+T+DE +++ SK GII  DP+T++ +VKLY D + G  KGD L  Y+K  
Sbjct: 168 NVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GNLKGDGLCCYLKRE 227

Query: 323 SVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDN-KKKKKLKKVEDKILGW 382
           SV LA+++LD   +R G K+ + V  AKF+ KG+   SKK    K  KK   ++ K L W
Sbjct: 228 SVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSMQQKQLDW 287

Query: 383 GGRDDA---KVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKFGPVDSVKVCEN 442
                A   ++     VI++ MF P +   D  + +EI  D++ E +KFG +  + + + 
Sbjct: 288 RPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR 347

Query: 443 HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQF 498
           HP GV  + F+D ++A  CI+ ++GRWFGG+QI A   DG  ++ +         RL  +
Sbjct: 348 HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREERLRGW 375

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy Swiss-Prot
Match: Q5RB63 (HIV Tat-specific factor 1 homolog OS=Pongo abelii OX=9601 GN=HTATSF1 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.8e-38
Identity = 116/366 (31.69%), Postives = 180/366 (49.18%), Query Frame = 0


Query: 143 TPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEVFPQLDADAPCT-----SIKEEG 202
           TPY+WD   +AW                          FP++  D   T         +G
Sbjct: 48  TPYEWDLDKKAW--------------------------FPKITEDFIATYQANYGFSNDG 107

Query: 203 DSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKEANKGPDGWFELK--INT 262
            S  + ++E  H         E+     + ++        K E  K   GWF ++   NT
Sbjct: 108 ASSSTANVEDVHARTAEEPPQEKAPEPTDPRK--------KGEKRKAESGWFHVEEDRNT 167

Query: 263 HVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRETGKKKGDALVSYMKEP 322
           +VYV+GLP D+T+DE +++ SK GII  DP+T++ +VKLY D + G  KGD L  Y+K  
Sbjct: 168 NVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GNLKGDGLCCYLKRE 227

Query: 323 SVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDN-KKKKKLKKVEDKILGW 382
           SV LA+++LD   +R G K+ + V  AKF+ KG+   SKK    K  KK   ++ K L W
Sbjct: 228 SVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSMQQKQLDW 287

Query: 383 GGRDDA---KVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKFGPVDSVKVCEN 442
                A   ++     VI++ MF P +   D  + +EI  D++ E +KFG +  + + + 
Sbjct: 288 RPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR 347

Query: 443 HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQF 498
           HP GV  + F+D ++A  CI+ ++GRWFGG+QI A   DG  ++ +         RL  +
Sbjct: 348 HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREERLRGW 375

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy Swiss-Prot
Match: O43120 (Splicing factor U2AF-associated protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=uap2 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-35
Identity = 113/349 (32.38%), Postives = 172/349 (49.28%), Query Frame = 0


Query: 171 EMTFMQEEEVFPQLDADAPCTSIKEEGDSVPSTSIEADHITKE-TNGKSEETETKKNVKR 230
           E+ ++ EE+ +   D +    S+K   +   ST  E   +T E T GK       ++ KR
Sbjct: 23  ELIYIDEEQTWKDYDPN----SLKM--NKAGSTGAEVSDVTAEATEGKESSNGEDRHTKR 82

Query: 231 KLSGNQVE--------KKEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGII 290
                  E        KK  ++  +      IN  VY+ GLP DVT+DE+ EVF KCG+I
Sbjct: 83  LYESTSAEGYPSGSRNKKSKSENSEASPAPVINKAVYIQGLPLDVTVDEIEEVFKKCGVI 142

Query: 291 KEDPETKKPRVKLYVDRETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQ 350
            ++ +   PR+K+Y   E G  KGDAL+ + +  SV LA Q+ D T  R G    M V +
Sbjct: 143 AKNIDNGTPRIKIY-RTEDGTPKGDALIVFFRSESVELAEQLFDDTEFRYGSGQKMRVQK 202

Query: 351 AKFEQKGDKFVSKKVDNKKKKKLKKVE----DKILGWGGRDD-----AKVSIPATVILRF 410
           A  + K +K V+K V    KKK  ++      +I  W   D+      K      V+L+ 
Sbjct: 203 ANIDYKKEKTVNKDVGGALKKKALRLRQQQMQQISSWDDVDEEVDDKRKKRFNKIVVLKH 262

Query: 411 MFTPAEMRADENLASEIETDVKEESTKFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIE 470
           +FT  E+     L  +++ D+ EE+ K G V +V + +  P GVV +RF + ++A+ C+ 
Sbjct: 263 IFTLEELDKTPELLIDLKDDITEEAEKCGRVTNVVLYDKEPDGVVTVRFSNNEEAEACVR 322

Query: 471 LMNGRWFGGKQIHASEDDGLVNHA-----MVRDLEADAARLEQFGSELE 497
           LM GR+F G+ + AS  DG V         + D E +  RLE+F   LE
Sbjct: 323 LMQGRYFDGRVVEASIYDGKVRFQKSGKHTLDDEEDEEKRLEKFADWLE 364

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy Swiss-Prot
Match: P53830 (Cold sensitive U2 snRNA suppressor 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CUS2 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.7e-16
Identity = 83/264 (31.44%), Postives = 142/264 (53.79%), Query Frame = 0


Query: 217 KSEETETKKNVKR-KLSGNQVEKKEANKGPDGWFELKINTHVYVTGLPEDVTIDE-VVEV 276
           K EE   +K +K   L   ++E   A+K          NT +Y++GLP D T  E + E 
Sbjct: 16  KKEELLRRKQLKESNLQKRELEYNNASK----------NTSIYISGLPTDKTTKEGLTEQ 75

Query: 277 FSKCGIIKEDPETKKPRVKLYVDRETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGK 336
           F K G+I+ + +  +P  KLYV+ + G  KGDAL++Y KE SV LA+++++ +     GK
Sbjct: 76  FCKYGMIRTNRD-GEPLCKLYVN-DKGAFKGDALITYSKEESVTLAIEMMNESIFL--GK 135

Query: 337 MLMSVTQAKFEQK-GDKFVSKKVDNKK-------KKKLKKV----EDKILGWGGRDDAKV 396
            +  V +A+F+ K GD    K+ D K+        K+LKK     E +++ +   D++  
Sbjct: 136 QI-RVERAQFQNKEGDNMHGKENDLKEFNGPEPPIKRLKKAKSEGEGEVIDYND-DESLA 195

Query: 397 SIPATVILRFMFTPAEMRADENLASEIETDVKEESTKFGPVDSVKVCENHPQGVVLIRFK 456
               TVI   +F   +   ++++ ++I+ D+ E   + G VDS+ V  N  +G   + FK
Sbjct: 196 KADRTVIFANVFNIYKSYTNDDI-NDIQEDLLEGCEEIGQVDSISVSPN--KGEATVVFK 255

Query: 457 DRKDAQKCIELMNGRWFGGKQIHA 467
           + K A +C ++M GR+F G+++ A
Sbjct: 256 NNKVALQCCKIMTGRYFDGQKLLA 260

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy TrEMBL
Match: A0A0A0KZ32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G491190 PE=3 SV=1)

HSP 1 Score: 993.8 bits (2568), Expect = 2.6e-286
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60
           MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP
Sbjct: 3   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 62

Query: 61  LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV 120
           LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV
Sbjct: 63  LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV 122

Query: 121 EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV 180
           EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV
Sbjct: 123 EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV 182

Query: 181 FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE 240
           FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE
Sbjct: 183 FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE 242

Query: 241 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 300
           ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET
Sbjct: 243 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 302

Query: 301 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 360
           GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK
Sbjct: 303 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 362

Query: 361 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 420
           KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF
Sbjct: 363 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 422

Query: 421 GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD 480
           GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD
Sbjct: 423 GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD 482

Query: 481 LEADAARLEQFGSELEAD 499
           LEADAARLEQFGSELEAD
Sbjct: 483 LEADAARLEQFGSELEAD 500

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy TrEMBL
Match: A0A5D3BUE8 (Splicing factor U2AF-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold145G00040 PE=3 SV=1)

HSP 1 Score: 961.1 bits (2483), Expect = 1.9e-276
Identity = 479/498 (96.18%), Postives = 489/498 (98.19%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60
           MDNNSVGN EMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP
Sbjct: 51  MDNNSVGNSEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 110

Query: 61  LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV 120
           LSSIPGLTT+VY QDSNL T VPANNN+DDELEKYQKEVGETEAT +VS PSG RNFG+V
Sbjct: 111 LSSIPGLTTKVYEQDSNLSTAVPANNNEDDELEKYQKEVGETEATAEVSGPSGSRNFGMV 170

Query: 121 EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV 180
           EGDLERPTTPPEGEEEFTDDDGT YKWDRVLRAWVPQDDAFFKHEQYRPE+MTFMQEEEV
Sbjct: 171 EGDLERPTTPPEGEEEFTDDDGTTYKWDRVLRAWVPQDDAFFKHEQYRPEDMTFMQEEEV 230

Query: 181 FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE 240
           FPQL+ADAPCTSIKEEGDSVPSTS+EADH+TKETNGKSEE ETKKNVKRKLSGNQVEKKE
Sbjct: 231 FPQLEADAPCTSIKEEGDSVPSTSVEADHVTKETNGKSEEIETKKNVKRKLSGNQVEKKE 290

Query: 241 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 300
           ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET
Sbjct: 291 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 350

Query: 301 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 360
           GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK
Sbjct: 351 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 410

Query: 361 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 420
           KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF
Sbjct: 411 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 470

Query: 421 GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD 480
           GPVDSVKVCENHPQGVVLIRFKDR+DAQKCIELMNGRWFGG+QIHASEDDGLVNHAMVRD
Sbjct: 471 GPVDSVKVCENHPQGVVLIRFKDRRDAQKCIELMNGRWFGGRQIHASEDDGLVNHAMVRD 530

Query: 481 LEADAARLEQFGSELEAD 499
           LEADAARLEQFGSELEAD
Sbjct: 531 LEADAARLEQFGSELEAD 548

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy TrEMBL
Match: A0A1S3B523 (splicing factor U2AF-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103486099 PE=3 SV=1)

HSP 1 Score: 961.1 bits (2483), Expect = 1.9e-276
Identity = 479/498 (96.18%), Postives = 489/498 (98.19%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60
           MDNNSVGN EMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP
Sbjct: 1   MDNNSVGNSEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60

Query: 61  LSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETEATTKVSSPSGGRNFGLV 120
           LSSIPGLTT+VY QDSNL T VPANNN+DDELEKYQKEVGETEAT +VS PSG RNFG+V
Sbjct: 61  LSSIPGLTTKVYEQDSNLSTAVPANNNEDDELEKYQKEVGETEATAEVSGPSGSRNFGMV 120

Query: 121 EGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEEV 180
           EGDLERPTTPPEGEEEFTDDDGT YKWDRVLRAWVPQDDAFFKHEQYRPE+MTFMQEEEV
Sbjct: 121 EGDLERPTTPPEGEEEFTDDDGTTYKWDRVLRAWVPQDDAFFKHEQYRPEDMTFMQEEEV 180

Query: 181 FPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEKKE 240
           FPQL+ADAPCTSIKEEGDSVPSTS+EADH+TKETNGKSEE ETKKNVKRKLSGNQVEKKE
Sbjct: 181 FPQLEADAPCTSIKEEGDSVPSTSVEADHVTKETNGKSEEIETKKNVKRKLSGNQVEKKE 240

Query: 241 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 300
           ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET
Sbjct: 241 ANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRET 300

Query: 301 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 360
           GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK
Sbjct: 301 GKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDNKK 360

Query: 361 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 420
           KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF
Sbjct: 361 KKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKF 420

Query: 421 GPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRD 480
           GPVDSVKVCENHPQGVVLIRFKDR+DAQKCIELMNGRWFGG+QIHASEDDGLVNHAMVRD
Sbjct: 421 GPVDSVKVCENHPQGVVLIRFKDRRDAQKCIELMNGRWFGGRQIHASEDDGLVNHAMVRD 480

Query: 481 LEADAARLEQFGSELEAD 499
           LEADAARLEQFGSELEAD
Sbjct: 481 LEADAARLEQFGSELEAD 498

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy TrEMBL
Match: A0A6J1G3U1 (HIV Tat-specific factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111450511 PE=3 SV=1)

HSP 1 Score: 860.9 bits (2223), Expect = 2.6e-246
Identity = 433/500 (86.60%), Postives = 458/500 (91.60%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60
           MDNN  GN E VTEAGWYILGE+QQHVGPYAFSELR+HFLNGYL+ESTL WSEGQSEW P
Sbjct: 1   MDNNPSGNPETVTEAGWYILGEDQQHVGPYAFSELRDHFLNGYLMESTLVWSEGQSEWHP 60

Query: 61  LSSIPGLTTEVYGQDSNLPTTVPANNND-DDELEKYQKEVGETEATTKVSSPSGGRNFGL 120
           LSSI GLTT+V+ Q+S+L T VP NNN+ DDELEKYQKEVGETE T + SSPS  RNF +
Sbjct: 61  LSSILGLTTKVFQQESDLSTAVPVNNNNGDDELEKYQKEVGETETTIEASSPSSSRNFSM 120

Query: 121 VEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEE 180
           VEGDL+RPTTPPEGEEEFTDDDGT Y+WDR LRAWVPQDDAFFKHEQY  EEMTF+QEEE
Sbjct: 121 VEGDLDRPTTPPEGEEEFTDDDGTTYRWDRALRAWVPQDDAFFKHEQYGAEEMTFVQEEE 180

Query: 181 VFPQLDADAPCTSIKEEGDSVPSTSI-EADHITKETNGKSEETETKKNVKRKLSGNQVEK 240
           VFPQL  D  CTSIKEE DSVPSTSI E D +TKE N KSE+ ETK+N KRKL   QVEK
Sbjct: 181 VFPQLLTDTTCTSIKEEDDSVPSTSIKEEDCVTKEANSKSEDMETKQNGKRKLCDKQVEK 240

Query: 241 KEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDR 300
           KEANKGPDGWFELKINTHVY+TGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVD+
Sbjct: 241 KEANKGPDGWFELKINTHVYITGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDK 300

Query: 301 ETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDN 360
           ETGK KGDALV+Y+KEPSVALAMQILDGTPLRPGGK+LMSVTQAKFEQKGDKFVSKKVDN
Sbjct: 301 ETGKTKGDALVTYLKEPSVALAMQILDGTPLRPGGKILMSVTQAKFEQKGDKFVSKKVDN 360

Query: 361 KKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEEST 420
           KKKKKLKKVEDKILGWGGRDDAK+SIPATV+LRFMFTPAEMR DENLASEIE DVKEEST
Sbjct: 361 KKKKKLKKVEDKILGWGGRDDAKISIPATVVLRFMFTPAEMRTDENLASEIEADVKEEST 420

Query: 421 KFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMV 480
           +FGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGG+QIHASEDDGLVNHA V
Sbjct: 421 RFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGRQIHASEDDGLVNHASV 480

Query: 481 RDLEADAARLEQFGSELEAD 499
           RDLEADA RLEQFGSELEAD
Sbjct: 481 RDLEADAVRLEQFGSELEAD 500

[Close]

BLAST of CsaV3_4G030880 vs. ExPASy TrEMBL
Match: A0A6J1DXR6 (splicing factor U2AF-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC111025104 PE=3 SV=1)

HSP 1 Score: 856.7 bits (2212), Expect = 4.9e-245
Identity = 433/501 (86.43%), Postives = 458/501 (91.42%), Query Frame = 0


Query: 1   MDNNSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQP 60
           MD  SVGN EMV EAGWYILGE+QQHVGPYAFSELREH+LNGYLLESTLAWSEGQSEW+P
Sbjct: 1   MDKTSVGNSEMVNEAGWYILGEDQQHVGPYAFSELREHYLNGYLLESTLAWSEGQSEWRP 60

Query: 61  LSSIPGLTTEVYGQDSNLPTTVPANNN-DDDELEKYQKEVGETEATTKVSSPSGGRNFGL 120
           LSSIPGLT + + Q+ N  TTVPA+NN DDDELEKYQKEV E  AT +  SPSG +NFG 
Sbjct: 61  LSSIPGLTAKTFQQEVNSLTTVPADNNYDDDELEKYQKEVREAGATAEPLSPSGSKNFGT 120

Query: 121 VEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEEE 180
           VEGD +RPTTPPEGEEEFTDDDGT YKWDRVLRAWVPQDDAFFKHEQY PEEMTFMQEEE
Sbjct: 121 VEGDYDRPTTPPEGEEEFTDDDGTAYKWDRVLRAWVPQDDAFFKHEQYGPEEMTFMQEEE 180

Query: 181 VFPQLDADAPCTSIKEEGDSVPSTSI--EADHITKETNGKSEETETKKNVKRKLSGNQVE 240
           VFP L  DA CT IKE  DSVPSTSI  + D +TKE NGKSE+ ETK+N KRKL   QVE
Sbjct: 181 VFPHLQEDATCTGIKEHDDSVPSTSIKEDKDSVTKEANGKSEDIETKQNGKRKLCDKQVE 240

Query: 241 KKEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVD 300
           KKEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVD
Sbjct: 241 KKEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVD 300

Query: 301 RETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVD 360
           RETGKKKGDALV+Y+KEPSVALA+QILDGT LRPGGK+LMSVTQAKFEQKGD FVSKKVD
Sbjct: 301 RETGKKKGDALVTYLKEPSVALALQILDGTSLRPGGKILMSVTQAKFEQKGDTFVSKKVD 360

Query: 361 NKKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEES 420
           NKKKKKLKKVE+KILGWGGRDDAKVSIPATVILR+MFTPAE+RADENL+SEIETDVKEES
Sbjct: 361 NKKKKKLKKVEEKILGWGGRDDAKVSIPATVILRYMFTPAEIRADENLSSEIETDVKEES 420

Query: 421 TKFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAM 480
            +FGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGG+QIHASEDDG VNHA+
Sbjct: 421 ARFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGRQIHASEDDGSVNHAL 480

Query: 481 VRDLEADAARLEQFGSELEAD 499
           VRDLEADAARLEQFGSELEAD
Sbjct: 481 VRDLEADAARLEQFGSELEAD 501

[Close]

BLAST of CsaV3_4G030880 vs. TAIR 10
Match: AT5G16260.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 572.4 bits (1474), Expect = 3.6e-163
Identity = 300/516 (58.14%), Postives = 366/516 (70.93%), Query Frame = 0


Query: 4   NSVGNLEMVTEAGWYILGENQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSS 63
           +S G     T+ GWYILGENQQ++GPY FSEL  HF NGYLLE+TL W++G+SEWQPLS+
Sbjct: 12  SSTGATVAATDVGWYILGENQQNLGPYTFSELCNHFRNGYLLETTLVWADGRSEWQPLSA 71

Query: 64  IPGLTTEVYGQDSNLPTT-------------------VPANNNDDDELEKYQKEVGETEA 123
           IP L + + G +   P                       A+ + +DE EK+Q+E+ + EA
Sbjct: 72  IPDLMSRISGAEIAYPAVGSSGLINGSNAGTRQEKQDYTASASTEDEFEKWQREIKDAEA 131

Query: 124 TTKVSSPSGGRNFGLVEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDD-AFFK 183
             +           LVE D ER ++PPEGE+EFTDDDGT YKWDR  R WVPQDD     
Sbjct: 132 EAERLKNGSVSGTELVEDDHERASSPPEGEDEFTDDDGTKYKWDRARRVWVPQDDPPLGS 191

Query: 184 HEQYRPEEMTFMQEEEVFPQLDADAPCTSIKEEGDSVPSTSIEADHIT--KETNGKSEET 243
            + Y  EEMTF +E+EVFP         +I     SV       D +   KE +G  E  
Sbjct: 192 VDPYGLEEMTFAKEDEVFP---------TINILDTSVDKKDASKDDVAGKKEEDGSDETA 251

Query: 244 ETKKNVKRKLSGNQVEKKEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGII 303
           E   N KRKL   + EKKE NK PD WFELK+N H+YV GLP+DVTI+EV EVFSKCGII
Sbjct: 252 EINSNGKRKLPEPETEKKEPNKPPDSWFELKVNPHIYVNGLPDDVTIEEVAEVFSKCGII 311

Query: 304 KEDPETKKPRVKLYVDRETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQ 363
           KED +T KPR+KLY D+ TGK KGDAL+SYMKEPSV LA++ILDG PLRP  K+LMSV++
Sbjct: 312 KED-DTGKPRIKLYSDKATGKLKGDALISYMKEPSVDLAIKILDGAPLRPADKLLMSVSR 371

Query: 364 AKFEQKGDKFVSKKVDNKKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRA 423
           AKFEQKG++F++K+ DNKKKKKLKKVE K+LGWGG DD+KVSIPATV+LR+MF+PAE+ A
Sbjct: 372 AKFEQKGERFITKQTDNKKKKKLKKVEQKLLGWGGTDDSKVSIPATVVLRYMFSPAELMA 431

Query: 424 DENLASEIETDVKEESTKFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGG 483
           DE+L +E+E DVKEES K GP DSVKVCE+HPQGVVL+RFKDR+DAQKCIE MNGRW+  
Sbjct: 432 DEDLVAELEEDVKEESLKHGPFDSVKVCEHHPQGVVLVRFKDRRDAQKCIEAMNGRWYAK 491

Query: 484 KQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEA 498
           +QIHAS DDG VNHA VRD + +A RL+QF +ELEA
Sbjct: 492 RQIHASLDDGSVNHATVRDFDLEAERLDQFAAELEA 517

[Close]

BLAST of CsaV3_4G030880 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 52.8 bits (125), Expect = 9.5e-07
Identity = 29/87 (33.33%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 382 VSIPA-TVILRFMFTPAEMRADENLASEIETDVKEESTKFGPVDSVKVCENHPQGVVLIR 441
           + +P+  ++L+ MF P+    +++   +I+ DVKEE +KFG ++ + V +N   G V +R
Sbjct: 460 IGVPSECLLLKNMFDPS-TETEDDFDEDIKEDVKEECSKFGKLNHIFVDKN-SVGFVYLR 519

Query: 442 FKDRKDAQKCIELMNGRWFGGKQIHAS 468
           F++ + A      ++GRWF GK I A+
Sbjct: 520 FENAQAAIGAQRALHGRWFAGKMITAT 544

[Close]

BLAST of CsaV3_4G030880 vs. TAIR 10
Match: AT2G16940.3 (Splicing factor, CC1-like )

HSP 1 Score: 52.8 bits (125), Expect = 9.5e-07
Identity = 29/87 (33.33%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 382 VSIPA-TVILRFMFTPAEMRADENLASEIETDVKEESTKFGPVDSVKVCENHPQGVVLIR 441
           + +P+  ++L+ MF P+    +++   +I+ DVKEE +KFG ++ + V +N   G V +R
Sbjct: 498 IGVPSECLLLKNMFDPS-TETEDDFDEDIKEDVKEECSKFGKLNHIFVDKN-SVGFVYLR 557

Query: 442 FKDRKDAQKCIELMNGRWFGGKQIHAS 468
           F++ + A      ++GRWF GK I A+
Sbjct: 558 FENAQAAIGAQRALHGRWFAGKMITAT 582

[Close]

BLAST of CsaV3_4G030880 vs. TAIR 10
Match: AT2G16940.2 (Splicing factor, CC1-like )

HSP 1 Score: 52.8 bits (125), Expect = 9.5e-07
Identity = 29/87 (33.33%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 382 VSIPA-TVILRFMFTPAEMRADENLASEIETDVKEESTKFGPVDSVKVCENHPQGVVLIR 441
           + +P+  ++L+ MF P+    +++   +I+ DVKEE +KFG ++ + V +N   G V +R
Sbjct: 509 IGVPSECLLLKNMFDPS-TETEDDFDEDIKEDVKEECSKFGKLNHIFVDKN-SVGFVYLR 568

Query: 442 FKDRKDAQKCIELMNGRWFGGKQIHAS 468
           F++ + A      ++GRWF GK I A+
Sbjct: 569 FENAQAAIGAQRALHGRWFAGKMITAT 593

[Close]

BLAST of CsaV3_4G030880 vs. TAIR 10
Match: AT1G50300.1 (TBP-associated factor 15 )

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-06
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 254 NTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDRETGKKKGDALVSYMK 313
           N  VYV+ LP     + + + F   G++K D  T  P+V LY D+ET + KGDA V+Y +
Sbjct: 7   NGSVYVSNLPLGTDENMLADYFGTIGLLKRDKRTGTPKVWLYRDKETDEPKGDATVTY-E 66

Query: 314 EPSVALA 321
           +P  ALA
Sbjct: 67  DPHAALA 72

The following BLAST results are available for this feature:

BLAST of CsaV3_4G030880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653887.1	5.3e-286	100.00	splicing factor U2AF-associated protein 2 isoform X2 [Cucumis sativus] >XP_01165...	[more]
XP_031740498.1	6.5e-284	98.61	splicing factor U2AF-associated protein 2 isoform X1 [Cucumis sativus] >XP_03174...	[more]
XP_008442163.1	3.8e-276	96.18	PREDICTED: splicing factor U2AF-associated protein 2 [Cucumis melo]	[more]
TYK02750.1	3.8e-276	96.18	splicing factor U2AF-associated protein 2 [Cucumis melo var. makuwa]	[more]
XP_038882575.1	1.5e-267	94.00	splicing factor U2AF-associated protein 2 isoform X3 [Benincasa hispida]	[more]

BLAST of CsaV3_4G030880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BGC0	3.1e-39	32.73	HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1	[more]
O43719	4.5e-38	31.69	HIV Tat-specific factor 1 OS=Homo sapiens OX=9606 GN=HTATSF1 PE=1 SV=1	[more]
Q5RB63	7.8e-38	31.69	HIV Tat-specific factor 1 homolog OS=Pongo abelii OX=9601 GN=HTATSF1 PE=2 SV=1	[more]
O43120	1.2e-35	32.38	Splicing factor U2AF-associated protein 2 OS=Schizosaccharomyces pombe (strain 9...	[more]
P53830	3.7e-16	31.44	Cold sensitive U2 snRNA suppressor 2 OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of CsaV3_4G030880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ32	2.6e-286	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G491190 PE=3 SV=1	[more]
A0A5D3BUE8	1.9e-276	96.18	Splicing factor U2AF-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3B523	1.9e-276	96.18	splicing factor U2AF-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC10348609...	[more]
A0A6J1G3U1	2.6e-246	86.60	HIV Tat-specific factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111450511 PE=3 SV=...	[more]
A0A6J1DXR6	4.9e-245	86.43	splicing factor U2AF-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of CsaV3_4G030880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16260.1	3.6e-163	58.14	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G16940.1	9.5e-07	33.33	Splicing factor, CC1-like	[more]
AT2G16940.3	9.5e-07	33.33	Splicing factor, CC1-like	[more]
AT2G16940.2	9.5e-07	33.33	Splicing factor, CC1-like	[more]
AT1G50300.1	1.6e-06	41.79	TBP-associated factor 15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	COILS	Coil	Coil	coord: 478..498
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..227
None	No IPR available	CDD	cd12285	RRM3_RBM39_like	coord: 385..470 e-value: 1.49465E-35 score: 125.35
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 256..339 e-value: 5.0E-9 score: 46.0 coord: 387..467 e-value: 3.1E-5 score: 33.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 257..328 e-value: 2.5E-7 score: 30.4 coord: 410..465 e-value: 8.3E-9 score: 35.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 386..471 score: 9.677973
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 255..342 score: 11.537011
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 254..337 e-value: 2.5E-19 score: 71.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 386..468 e-value: 3.5E-27 score: 96.2
IPR025640	GYF domain 2	PFAM	PF14237	GYF_2	coord: 17..67 e-value: 2.9E-15 score: 55.8
IPR034393	TatSF1-like	PANTHER	PTHR15608	SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2	coord: 87..496
IPR034392	TatSF1-like, RNA recognition motif 1	CDD	cd12281	RRM1_TatSF1_like	coord: 254..348 e-value: 1.83302E-48 score: 160.007
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 384..467
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 249..332

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G030880.1	CsaV3_4G030880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
molecular_function	GO:0003676	nucleic acid binding