CsaV3_4G030180 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G030180
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	S-protein homolog
Location	chr4: 19923279 .. 19926905 (+)
RNA-Seq Expression	CsaV3_4G030180
Synteny	CsaV3_4G030180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCCAACATGATGTTGTTTTCTTCACATTCTTCTTCCTCATTGCCATGTCTTCTCCATCCAAAATCATAGCAACTACTAGAGGCATGCTTGATTTAGCACAACCTCCAACGACTCTGGAAGAATCTACCATTCGTAATTTTAGAGAATCTATTGCTGAAGTACCTGAATCATCGTCATCAATTTCCCTTCCTCCAACTTCTGACGAGTTTATTAGTTTTGATCCCAATGGAATGGGTGCAAGGGCACCATTGCCTGCATCATTGTTAGATTGCAAGCCCAAAGGACCAATTGCATGGTCTGCTCCCAATCCCAAACACAACATGTTGGAATCAACTATATGTGCAACCACACACTAAAAAGTATAACACATTATTCATTTATTATAATCTTTTATAATTTTTTTGTCCAATATGCTTGTAACATCTCAAGTGCAAGATTAATTCTTTTGGTATAAAGAAGCGTTAGTACATCTATCAACAAATCTTTTCGTATAGATAAATCTTTTCGTATAGATAAATCTTTTCGTATTAAATATCTATCCAAGCTATGGTGGGGTTGCGTATATCTTTTACTATCTTCTCATATTCAAAAGAACCTAATTTTCATTGTTCACGCGAGATTTCAAGAGAAATTTAAATTGTGGAATTTGAACTTTGTATTTGTATTAATTTCCATAGACTTGGTACAATTTTTAATACATGATCATTTTGATGCTTTCTCTTAAGAAAAATAAACATTAAACTTTAGACTTGTTCTTCTTGGATAATCGACATTTGAGCTTGATGATCTTCCTAGATAATCGTTATTTGGACTCGATGGTCTTCTTGGATAGTCCATTGATTTGATCTTTGGTAGAATCGATCTTCGAACTTAATATAATCTTTCTTGGATGATTGGTCTTTAGGCTTGAAGATTTTCATGGATAATTGACCTGAAACTTATTGATCTTCTTCAATGACCAGTCTTTAGGTTAGAGAACTAAACCAAACCAAATTGTAATACTCAAATTGTGAAATTGGCTAAAGTAATTTCTACCGACATGGACAACATATACGAAGGAAATAAAGTTAAGGCAATTTTCAATAATGAAAAATGTAATACCTATAAATAAAAGCCTAAAAGTTAAGTTATACATGAGGCCTTAGGTACCAAATATAGTGTTCTTCCTAAAAAAAGTATATCACATAAATGCCTAGAAGGAATTTAACACCACAAAATAACTTACCAACTCTCCAAGTCTGGAACTATATAATGGGCGTCACTAGAATCTTTGTTTTCTAGCATGTAATGCTTCTCTCTCTGTACGAGTAACTTCTTTAAGACTTATAGCACATATAATAATGACAGTTTCAGAAACACTAATTTGGCCTAATTTTAAAAACATTAATAAAAAGTAGAGGTAAAAAAAACGTGTATAGGCTTAAGTTTAAAAAACTTAAAGTCAAAAACCAAATAGATAACAAACCAAATAGAATTCACAACTATAACAAGGCCAAAACAATTGCTTAAATTGATGATTTATCAGAGCTTCCTATAAATCAAGATAATTTCATTAGCAACATAAAGAGTTTATTTCTTGCTCATAGTGAAAATGTTCATAACTTTTTTTAATCTTCAATTATTAGTAAATCAAGAGTAACCAAATTACAACAATTTAGTAATGAGTTAGATAATAAGCACTTGTGTTCAAGTTTATATATATAGGTTGTTTATGTTATAACTATCATGCAATTACTATACAACTCAATAGTAACCATAAACAAAAGATCAATAGAAAAACCAAAAGTACTCAAGTTCACTTGGGAAATGCATAGACAAACAAAAACACCCTACACATCATCAAAGTTTAAAATCTCACATTTCGTTTTTCATTCTCTTTTCTCAAAGCTTCAGCCCATAGCCATGAAATCTCGAAATCTCCTTGGCCTTGATTTCCTAATTCGAACGAACAAAAATCAATTAAAAATCAACCAAATGCTTCATTGAGGCATTTCATCAAACACATTGGAAGCTACCAAAATGCTTCATCACATAGCCCATCATAAAGAAAAAATGTAGATTCACATTAGAAAAATGATCGTAAAGAACAATATTAAATAGGATGGTAGACAAAACAAACACGTATCTCCTATAAAAGAAAAACTATGAGGGATGTTTTCCATAAAAAGAACCATCAATATATCAAATTGTGGGTAAAATGAAAGCATTTGAAGTTAATATACGGTACAAATACAAACAATAGAAATAATGAAACTTTGATAAAAATACCTTAATATTGTGGGTAAAATGTAAGCATTTGAAGAGAAATAAAAAGAAAATTGGAGTGAAAATGAAAACACTAGAAGTTGAATCTGAACGAAGAATGGAGACAGACCATGATGGGCTTGATCTCCAACGAGCTACCGCACAAGGTGGCTGAGATTCATCGGCAAGTTCAGCTGTGAAAGGGGTGTTGGGTGGTGGCATCGGCTAAAGGAGAAAAAGAAGGGGTTTTGGGCGTGTCGTTGACGAAAAGTCGCATCGTTTTCGGCGTGCGTGAGAGAGGAAGAGAGATGGTTAGCGGAAGGGAGAGAAAATCAAGAAGGAGGGGCGACGCGTGGATCTTCCACAAAGAAGAAGAAAAAAAGAAAAAGAAGAGAAGAAGAAGAAGAGGAGGAGAAGAAGAGAAGAAGAAGAAGAAGAGAAGAAGAAGAGGAGGAGGAGGTAGAGAAAGGGTTTTGGAGATATTTTATAAGTTTTATTTTAATAAATAAATTATCTAATGTTTTTATAATTAGGAAAAAATATGGTTTTAATAAATTACTTTTGATTTAAAATGAATTTTATTTTAATAAATTAGATAAATTATCTTTTGAATCTTTTATGACACCAAATAACGGTCGCGGAAAGTGAAATAAAAAAAATTCCATCTTTTTCCGCCAACAACACAAACTTTTAGCTTTTGTGACGGTTTTTTCCTCTCAATTTGGGATGTATGCAACTCTCATAGTAGGTAGTTTTTCTTGCAGTGTTGACCAGAAATTTACAAACATATAGCAAAATTTTCATGTTCTATCAATAGTAGACATTTTAGTCTCAATTTATGCCAAAGAAAGCTAACCTTACCCATTTTTTTTTCTTCACAGTTGTTTAAGCAATAGCGACGACAATAGAAATTATAGTTTAAATAATATAAACCATTGCTTACCAACATACGAGAAAAGAATTTCTTTTCTTTGCACAGACCCTACGTACATATATCCACTATTTGCACCACGTCCCAATCATACCAATACAAAATAAAGGGTAAAAGGCCTTCGTATTCTTGTCTCTTCCTTTGTGTTTCAAACGACCCCTTAAAAATGGGCTCATCTCCAACGCTTGCACTGTCTTTGCTAATTTTCTTTCTGTGTAACCTATGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCTTCAACCAAATTGAATATGGCATACCTGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCACTTGGACAAGGCTACTCGTTCAAGTTTAGACCCAACCTCGTGGGCACGACCCTGTTTTTCTGCAGCTTCACATGGACTGGACAACACTAA

mRNA sequence

ATGGCTTTCCAACATGATGTTGTTTTCTTCACATTCTTCTTCCTCATTGCCATGTCTTCTCCATCCAAAATCATAGCAACTACTAGAGGCATGCTTGATTTAGCACAACCTCCAACGACTCTGGAAGAATCTACCATTCGTAATTTTAGAGAATCTATTGCTGAAGTACCTGAATCATCGTCATCAATTTCCCTTCCTCCAACTTCTGACGAGTTTATTAGTTTTGATCCCAATGGAATGGGTGCAAGGGCACCATTGCCTGCATCATTGTTAGATTGCAAGCCCAAAGGACCAATTGCATGGTCTGCTCCCAATCCCAAACACAACATACCCTACGTACATATATCCACTATTTGCACCACGTCCCAATCATACCAATACAAAATAAAGGGTAAAAGGCCTTCGTATTCTTGTCTCTTCCTTTGTGTTTCAAACGACCCCTTAAAAATGGGCTCATCTCCAACGCTTGCACTGTCTTTGCTAATTTTCTTTCTGTGTAACCTATGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCTTCAACCAAATTGAATATGGCATACCTGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCACTTGGACAAGGCTACTCGTTCAAGTTTAGACCCAACCTCGTGGGCACGACCCTGTTTTTCTGCAGCTTCACATGGACTGGACAACACTAA

Coding sequence (CDS)

ATGGCTTTCCAACATGATGTTGTTTTCTTCACATTCTTCTTCCTCATTGCCATGTCTTCTCCATCCAAAATCATAGCAACTACTAGAGGCATGCTTGATTTAGCACAACCTCCAACGACTCTGGAAGAATCTACCATTCGTAATTTTAGAGAATCTATTGCTGAAGTACCTGAATCATCGTCATCAATTTCCCTTCCTCCAACTTCTGACGAGTTTATTAGTTTTGATCCCAATGGAATGGGTGCAAGGGCACCATTGCCTGCATCATTGTTAGATTGCAAGCCCAAAGGACCAATTGCATGGTCTGCTCCCAATCCCAAACACAACATACCCTACGTACATATATCCACTATTTGCACCACGTCCCAATCATACCAATACAAAATAAAGGGTAAAAGGCCTTCGTATTCTTGTCTCTTCCTTTGTGTTTCAAACGACCCCTTAAAAATGGGCTCATCTCCAACGCTTGCACTGTCTTTGCTAATTTTCTTTCTGTGTAACCTATGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCTTCAACCAAATTGAATATGGCATACCTGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCACTTGGACAAGGCTACTCGTTCAAGTTTAGACCCAACCTCGTGGGCACGACCCTGTTTTTCTGCAGCTTCACATGGACTGGACAACACTAA

Protein sequence

MAFQHDVVFFTFFFLIAMSSPSKIIATTRGMLDLAQPPTTLEESTIRNFRESIAEVPESSSSISLPPTSDEFISFDPNGMGARAPLPASLLDCKPKGPIAWSAPNPKHNIPYVHISTICTTSQSYQYKIKGKRPSYSCLFLCVSNDPLKMGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH*

Homology

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BLAST of CsaV3_4G030180 vs. NCBI nr
Match: KAE8649707.1 (hypothetical protein Csa_012825 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 1.2e-134
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MAFQHDVVFFTFFFLIAMSSPSKIIATTRGMLDLAQPPTTLEESTIRNFRESIAEVPESS 60
           MAFQHDVVFFTFFFLIAMSSPSKIIATTRGMLDLAQPPTTLEESTIRNFRESIAEVPESS
Sbjct: 1   MAFQHDVVFFTFFFLIAMSSPSKIIATTRGMLDLAQPPTTLEESTIRNFRESIAEVPESS 60

Query: 61  SSISLPPTSDEFISFDPNGMGARAPLPASLLDCKPKGPIAWSAPNPKHNIPYVHISTICT 120
           SSISLPPTSDEFISFDPNGMGARAPLPASLLDCKPKGPIAWSAPNPKHNIPYVHISTICT
Sbjct: 61  SSISLPPTSDEFISFDPNGMGARAPLPASLLDCKPKGPIAWSAPNPKHNIPYVHISTICT 120

Query: 121 TSQSYQYKIKGKRPSYSCLFLCVSNDPLKMGSSPTLALSLLIFFLCNLCAIQGSIFIQPV 180
           TSQSYQYKIKGKRPSYSCLFLCVSNDPLKMGSSPTLALSLLIFFLCNLCAIQGSIFIQPV
Sbjct: 121 TSQSYQYKIKGKRPSYSCLFLCVSNDPLKMGSSPTLALSLLIFFLCNLCAIQGSIFIQPV 180

Query: 181 TTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQ 240
           TTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQ
Sbjct: 181 TTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQ 240

Query: 241 H 242
           H
Sbjct: 241 H 241

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BLAST of CsaV3_4G030180 vs. NCBI nr
Match: KGN55015.2 (hypothetical protein Csa_011982, partial [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 4.0e-69
Identity = 128/131 (97.71%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 111 PYVHISTICTTSQSYQYKIKGKRPSYSCLFLCVSNDPLKMGSSPTLALSLLIFFLCNLCA 170
           PYVHISTICTTSQSYQYKIKG++PSYSCLFLCVSNDPLKMGSSPTLALSLLI FLCNLCA
Sbjct: 1   PYVHISTICTTSQSYQYKIKGRKPSYSCLFLCVSNDPLKMGSSPTLALSLLILFLCNLCA 60

Query: 171 IQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTL 230
           IQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTL
Sbjct: 61  IQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTL 120

Query: 231 FFCSFTWTGQH 242
           FFCSFTWTGQH
Sbjct: 121 FFCSFTWTGQH 131

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BLAST of CsaV3_4G030180 vs. NCBI nr
Match: KAE8649709.1 (hypothetical protein Csa_012565, partial [Cucumis sativus] >KAE8649711.1 hypothetical protein Csa_012458, partial [Cucumis sativus] >KGN55007.2 hypothetical protein Csa_012551, partial [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 7.5e-52
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MAFQHDVVFFTFFFLIAMSSPSKIIATTRGMLDLAQPPTTLEESTIRNFRESIAEVPESS 60
           MAFQHDVVFFTFFFLIAMSSPSKI+ATTRGMLDLAQPPTTLEESTIRNFRESIAEVPESS
Sbjct: 1   MAFQHDVVFFTFFFLIAMSSPSKIMATTRGMLDLAQPPTTLEESTIRNFRESIAEVPESS 60

Query: 61  SSISLPPTSDEFISFDPNGMGARAPLPASLLDCKPKGPIAWSAPNPKHN 110
           SSISLPPTSDEFISFDPNGMGARAPLPASLLDCKPKGPIAWSAPNPKHN
Sbjct: 61  SSISLPPTSDEFISFDPNGMGARAPLPASLLDCKPKGPIAWSAPNPKHN 109

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BLAST of CsaV3_4G030180 vs. NCBI nr
Match: KGN55010.2 (hypothetical protein Csa_012448 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 150 MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 209
           MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 210 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 242
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 92

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BLAST of CsaV3_4G030180 vs. NCBI nr
Match: KAA0059510.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >KAA0059511.1 self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK14096.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 2.2e-43
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 150 MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 209
           MGSSPTLALSLLIFFLCNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 210 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 242
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 92

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BLAST of CsaV3_4G030180 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 182 TVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQ 241
           TVV    +  G P+T+HCKSK DDLG+HV+P  Q Y FKF+PNL  +TLFFCSF W  Q
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQ 87

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BLAST of CsaV3_4G030180 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-11
Identity = 30/58 (51.72%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 183 VVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQ 241
           V I N++  G+ + +HCKS +DDLG+ +L     +SFKFR ++VGTTLF+C FTW GQ
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQ 96

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BLAST of CsaV3_4G030180 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-10
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 181 TTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLV-GTTLFFCSFTWTG 240
           + V I N++  G  + +HCKS +DDLG+ +L     +SFKFRP++V G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

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BLAST of CsaV3_4G030180 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.7e-09
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 148 LKMGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLG 207
           +K  S   + LS+++F++ + C           T V + N I     +T+ C+SK+DDLG
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHGYNPF---AKTVVTVTNNISPQTTLTISCRSKDDDLG 60

Query: 208 VHVLPLGQGYSFKFRPNLVGTTLFFCSFTW 238
            H+L  GQ + +KFRP+   TTLF C F W
Sbjct: 61  EHLLLHGQAFLWKFRPSWFRTTLFTCKFLW 87

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BLAST of CsaV3_4G030180 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.1e-08
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 174 SIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFC 233
           S+F     TV I N +   + +  HCKSK+DDLG   L  G+ +SF F     G TL+FC
Sbjct: 41  SVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFC 100

Query: 234 SFTWTGQ 241
           SF+W  +
Sbjct: 101 SFSWPNE 107

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BLAST of CsaV3_4G030180 vs. ExPASy TrEMBL
Match: A0A5D3CUL8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00100 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 150 MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 209
           MGSSPTLALSLLIFFLCNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 210 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 242
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 92

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BLAST of CsaV3_4G030180 vs. ExPASy TrEMBL
Match: A0A5A7U4C4 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00340 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 150 MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 209
           MGSSPTLALSLLIFFLCNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 210 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 242
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 92

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BLAST of CsaV3_4G030180 vs. ExPASy TrEMBL
Match: A0A5A7U8G6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001600 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 150 MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 209
           MGSSPTLALSLLIFFLCNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 210 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 242
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 92

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BLAST of CsaV3_4G030180 vs. ExPASy TrEMBL
Match: A0A5D3CQA2 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00110 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 150 MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 209
           MGSSPTLALSLLIFFLCNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 210 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 242
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 92

[Close]

BLAST of CsaV3_4G030180 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.8e-43
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 150 MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 209
           MGSSPTLALSLLIFFLCN+ AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 210 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 242
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 92

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BLAST of CsaV3_4G030180 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 182 TVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQ 241
           TVV    +  G P+T+HCKSK DDLG+HV+P  Q Y FKF+PNL  +TLFFCSF W  Q
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQ 87

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BLAST of CsaV3_4G030180 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 72.0 bits (175), Expect = 7.3e-13
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 176 FIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSF 235
           F  P TTVVI+N +   +P+  HCKSKNDDLG   + +   +SF+FRP++ G TLFFC F
Sbjct: 23  FDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGF 82

Query: 236 TW 238
            W
Sbjct: 83  IW 84

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BLAST of CsaV3_4G030180 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12
Identity = 30/58 (51.72%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 183 VVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQ 241
           V I N++  G+ + +HCKS +DDLG+ +L     +SFKFR ++VGTTLF+C FTW GQ
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQ 96

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BLAST of CsaV3_4G030180 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 69.7 bits (169), Expect = 3.6e-12
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 150 MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 209
           MGS  T     L+FF+  +     +I  +  T+VVI+N +  G+P+  HCKS+ DDLG  
Sbjct: 1   MGSLET----CLLFFV--MVMFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQ 60

Query: 210 VLPLGQGYSFKFRPNLVGTTLFFCSFTW 238
            L  G+ +SF F P++ G TLF+C F+W
Sbjct: 61  SLAPGRSWSFGFTPDIFGRTLFYCRFSW 82

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BLAST of CsaV3_4G030180 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 181 TTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLV-GTTLFFCSFTWTG 240
           + V I N++  G  + +HCKS +DDLG+ +L     +SFKFRP++V G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

The following BLAST results are available for this feature:

BLAST of CsaV3_4G030180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649707.1	1.2e-134	100.00	hypothetical protein Csa_012825 [Cucumis sativus]	[more]
KGN55015.2	4.0e-69	97.71	hypothetical protein Csa_011982, partial [Cucumis sativus]	[more]
KAE8649709.1	7.5e-52	99.08	hypothetical protein Csa_012565, partial [Cucumis sativus] >KAE8649711.1 hypothe...	[more]
KGN55010.2	1.4e-45	100.00	hypothetical protein Csa_012448 [Cucumis sativus]	[more]
KAA0059510.1	2.2e-43	97.83	self-incompatibility protein 1 [Cucumis melo var. makuwa] >KAA0059511.1 self-inc...	[more]

BLAST of CsaV3_4G030180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	1.7e-14	59.32	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
Q9FMQ4	2.3e-11	51.72	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JZG1	1.5e-10	50.82	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	3.7e-09	36.67	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
F4JLQ5	4.1e-08	41.79	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of CsaV3_4G030180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CUL8	1.1e-43	97.83	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]
A0A5A7U4C4	1.1e-43	97.83	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A5A7U8G6	1.1e-43	97.83	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00...	[more]
A0A5D3CQA2	1.1e-43	97.83	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]
A0A5D3CTD8	1.8e-43	96.74	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]

BLAST of CsaV3_4G030180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	1.2e-15	59.32	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	7.3e-13	51.61	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	1.6e-12	51.72	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	3.6e-12	40.91	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	1.1e-11	50.82	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 182..240 e-value: 3.7E-17 score: 62.8
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 156..240
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 156..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G030180.1	CsaV3_4G030180.1	mRNA