CsaV3_4G029650 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029650
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 19234579 .. 19234839 (+)
RNA-Seq ExpressionCsaV3_4G029650
SyntenyCsaV3_4G029650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGACTGGGAGATGTGTGGCTTGATTGTGAAGAAATGGCTCGTGGAACTTGCAGTGCAAACGAGGTTGCCATGCAGATGGCTAACGACAAAGAAGATCGGCTCGGGTCTATGAACTTTGCAGTTGGCTTCGACTTCGTCGGACGGTTGGAGAGACGAAGGGATGACGACGAGAGGCTTGCCAGAACAAAGACGCTTACTCGTGGAGGCGTCGACGTCCATTTTGACTTGGCTTTGATAGCTAACCCGCGACTTGACTAG

mRNA sequence

ATGCGACTGGGAGATGTGTGGCTTGATTGTGAAGAAATGGCTCGTGGAACTTGCAGTGCAAACGAGGTTGCCATGCAGATGGCTAACGACAAAGAAGATCGGCTCGGGTCTATGAACTTTGCAGTTGGCTTCGACTTCGTCGGACGGTTGGAGAGACGAAGGGATGACGACGAGAGGCTTGCCAGAACAAAGACGCTTACTCGTGGAGGCGTCGACGTCCATTTTGACTTGGCTTTGATAGCTAACCCGCGACTTGACTAG

Coding sequence (CDS)

ATGCGACTGGGAGATGTGTGGCTTGATTGTGAAGAAATGGCTCGTGGAACTTGCAGTGCAAACGAGGTTGCCATGCAGATGGCTAACGACAAAGAAGATCGGCTCGGGTCTATGAACTTTGCAGTTGGCTTCGACTTCGTCGGACGGTTGGAGAGACGAAGGGATGACGACGAGAGGCTTGCCAGAACAAAGACGCTTACTCGTGGAGGCGTCGACGTCCATTTTGACTTGGCTTTGATAGCTAACCCGCGACTTGACTAG

Protein sequence

MRLGDVWLDCEEMARGTCSANEVAMQMANDKEDRLGSMNFAVGFDFVGRLERRRDDDERLARTKTLTRGGVDVHFDLALIANPRLD*
Homology
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BLAST of CsaV3_4G029650 vs. NCBI nr
Match: KAE8649681.1 (hypothetical protein Csa_012816 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 1.3e-41
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MRLGDVWLDCEEMARGTCSANEVAMQMANDKEDRLGSMNFAVGFDFVGRLERRRDDDERL 60
          MRLGDVWLDCEEMARGTCSANEVAMQMANDKEDRLGSMNFAVGFDFVGRLERRRDDDERL
Sbjct: 1  MRLGDVWLDCEEMARGTCSANEVAMQMANDKEDRLGSMNFAVGFDFVGRLERRRDDDERL 60

Query: 61 ARTKTLTRGGVDVHFDLALIANPRLD 87
          ARTKTLTRGGVDVHFDLALIANPRLD
Sbjct: 61 ARTKTLTRGGVDVHFDLALIANPRLD 86

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649681.11.3e-41100.00hypothetical protein Csa_012816 [Cucumis sativus][more]
BLAST of CsaV3_4G029650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029650 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029650.1CsaV3_4G029650.1mRNA