CsaV3_4G029640 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029640
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 19230050 .. 19230334 (+)
RNA-Seq ExpressionCsaV3_4G029640
SyntenyCsaV3_4G029640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCAATTTCTATCAACAAAGTGTGTAGTCAAAACCATATAATTAATAGTTTGAATCGATGTCCAAGATCAGTCGTAAGTGAGACTCTATATCCTTCATTCACAAAAGTATCTCTCAATTATTCTCCCAAGTTAGCATATATTCCTAAAATATCTCTAGCAATTGTAGTTCGAGAAGGAATAACAAATCTTGGCTCTACTAACATCAAAGTCCCTTCCACAAATCCAAAGGACAACTCGTCAACTATGATCATCTTAGGAATTAGTCTTCGAGCATTCTCAATG

mRNA sequence

CTTCCAATTTCTATCAACAAAGTGTGTAGTCAAAACCATATAATTAATAGTTTGAATCGATGTCCAAGATCAGTCGTAAGTGAGACTCTATATCCTTCATTCACAAAAGTATCTCTCAATTATTCTCCCAAGTTAGCATATATTCCTAAAATATCTCTAGCAATTGTAGTTCGAGAAGGAATAACAAATCTTGGCTCTACTAACATCAAAGTCCCTTCCACAAATCCAAAGGACAACTCGTCAACTATGATCATCTTAGGAATTAGTCTTCGAGCATTCTCAATG

Coding sequence (CDS)

CTTCCAATTTCTATCAACAAAGTGTGTAGTCAAAACCATATAATTAATAGTTTGAATCGATGTCCAAGATCAGTCGTAAGTGAGACTCTATATCCTTCATTCACAAAAGTATCTCTCAATTATTCTCCCAAGTTAGCATATATTCCTAAAATATCTCTAGCAATTGTAGTTCGAGAAGGAATAACAAATCTTGGCTCTACTAACATCAAAGTCCCTTCCACAAATCCAAAGGACAACTCGTCAACTATGATCATCTTAGGAATTAGTCTTCGAGCATTCTCAATG

Protein sequence

LPISINKVCSQNHIINSLNRCPRSVVSETLYPSFTKVSLNYSPKLAYIPKISLAIVVREGITNLGSTNIKVPSTNPKDNSSTMIILGISLRAFSM
Homology
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BLAST of CsaV3_4G029640 vs. NCBI nr
Match: KAE8649680.1 (hypothetical protein Csa_012634, partial [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  LPISINKVCSQNHIINSLNRCPRSVVSETLYPSFTKVSLNYSPKLAYIPKISLAIVVREG 60
          LPISINKVCSQNHIINSLNRCPRSVVSETLYPSFTKVSLNYSPKLAYIPKISLAIVVREG
Sbjct: 1  LPISINKVCSQNHIINSLNRCPRSVVSETLYPSFTKVSLNYSPKLAYIPKISLAIVVREG 60

Query: 61 ITNLGSTNIKVPSTNPKDNSSTMIILGISLRAFSM 96
          ITNLGSTNIKVPSTNPKDNSSTMIILGISLRAFSM
Sbjct: 61 ITNLGSTNIKVPSTNPKDNSSTMIILGISLRAFSM 95

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029640 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649680.12.5e-43100.00hypothetical protein Csa_012634, partial [Cucumis sativus][more]
BLAST of CsaV3_4G029640 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029640 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029640 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029640.1CsaV3_4G029640.1mRNA