CsaV3_4G029630 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029630
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 19222233 .. 19222532 (-)
RNA-Seq ExpressionCsaV3_4G029630
SyntenyCsaV3_4G029630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAAAAAGTACAAAAAACGACCTCAAGACGGCGGCCGGCAAGGACGACGACGACAGTGGCAGTGCGGCGACTACGACCGGCAACGACAACGGCAACGACTCTCTCACTTTCTCTCTCGATTTCTCCCTTTCTTTCTCACTTATCTTCTCTTCCGAATGAAATCTCGGTTAGAATTAGCCCAACCTTTTCGCAACGTCTTCGAAAACGTCGCGAAAAGTATGTTTCCATGACGCGGAAGCTGTTGACGTCACGAAAATGCGCAAGGACAACCACGTCACGGAAAGTGGAAACATAA

mRNA sequence

ATGCAAAAAAAAGTACAAAAAACGACCTCAAGACGGCGGCCGGCAAGGACGACGACGACAGTGGCAGTGCGGCGACTACGACCGGCAACGACAACGGCAACGACTCTCTCACTTTCTCTCTCGATTTCTCCCTTTCTTTCTCACTTATCTTCTCTTCCGAATGAAATCTCGGTTAGAATTAGCCCAACCTTTTCGCAACGTCTTCGAAAACGTCGCGAAAAGTATGTTTCCATGACGCGGAAGCTGTTGACGTCACGAAAATGCGCAAGGACAACCACGTCACGGAAAGTGGAAACATAA

Coding sequence (CDS)

ATGCAAAAAAAAGTACAAAAAACGACCTCAAGACGGCGGCCGGCAAGGACGACGACGACAGTGGCAGTGCGGCGACTACGACCGGCAACGACAACGGCAACGACTCTCTCACTTTCTCTCTCGATTTCTCCCTTTCTTTCTCACTTATCTTCTCTTCCGAATGAAATCTCGGTTAGAATTAGCCCAACCTTTTCGCAACGTCTTCGAAAACGTCGCGAAAAGTATGTTTCCATGACGCGGAAGCTGTTGACGTCACGAAAATGCGCAAGGACAACCACGTCACGGAAAGTGGAAACATAA

Protein sequence

MQKKVQKTTSRRRPARTTTTVAVRRLRPATTTATTLSLSLSISPFLSHLSSLPNEISVRISPTFSQRLRKRREKYVSMTRKLLTSRKCARTTTSRKVET*
Homology
[Close]
BLAST of CsaV3_4G029630 vs. NCBI nr
Match: KGN54714.1 (hypothetical protein Csa_012341 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 6.7e-39
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MQKKVQKTTSRRRPARTTTTVAVRRLRPATTTATTLSLSLSISPFLSHLSSLPNEISVRI 60
           MQKKVQKTTSRRRPARTTTTVAVRRLRPATTTATTLSLSLSISPFLSHLSSLPNEISVRI
Sbjct: 1   MQKKVQKTTSRRRPARTTTTVAVRRLRPATTTATTLSLSLSISPFLSHLSSLPNEISVRI 60

Query: 61  SPTFSQRLRKRREKYVSMTRKLLTSRKCARTTTSRKVET 100
           SPTFSQRLRKRREKYVSMTRKLLTSRKCARTTTSRKVET
Sbjct: 61  SPTFSQRLRKRREKYVSMTRKLLTSRKCARTTTSRKVET 99

[Close]
BLAST of CsaV3_4G029630 vs. ExPASy TrEMBL
Match: A0A0A0L0Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G431940 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.3e-39
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MQKKVQKTTSRRRPARTTTTVAVRRLRPATTTATTLSLSLSISPFLSHLSSLPNEISVRI 60
           MQKKVQKTTSRRRPARTTTTVAVRRLRPATTTATTLSLSLSISPFLSHLSSLPNEISVRI
Sbjct: 1   MQKKVQKTTSRRRPARTTTTVAVRRLRPATTTATTLSLSLSISPFLSHLSSLPNEISVRI 60

Query: 61  SPTFSQRLRKRREKYVSMTRKLLTSRKCARTTTSRKVET 100
           SPTFSQRLRKRREKYVSMTRKLLTSRKCARTTTSRKVET
Sbjct: 61  SPTFSQRLRKRREKYVSMTRKLLTSRKCARTTTSRKVET 99

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029630 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54714.16.7e-39100.00hypothetical protein Csa_012341 [Cucumis sativus][more]
BLAST of CsaV3_4G029630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0Y23.3e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G431940 PE=4 SV=1[more]
BLAST of CsaV3_4G029630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029630.1CsaV3_4G029630.1mRNA