CsaV3_4G029600 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029600
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 19197682 .. 19198517 (+)
RNA-Seq ExpressionCsaV3_4G029600
SyntenyCsaV3_4G029600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATACTGTTGTTATATCACTTATGAGCCAGGGTGGAATAAGTTAGGAAGAAAAGGGTTTGATGACAACCGAGTGGTATAAGAGATAGCTTGATGAGGTTGAGTTATGGTTCTAAGAATGGACTAAGTATAGTTAAGGGCCATAAGGTGTATAGCTATGTGGCCAAAAGAAAGAAAGAAAGAAAGGGTGAAATTTGGATAAAGTGTTGAGTAGGTGAATTTAAAATATTGTGCGAACAACTAAAGCCAAGGGGGCGGCTCACGTTGGAAGAGAGTGGAGGTTGGAGGATGGTTCACGTGACTCGAGTAGAAGGCTGGGCTTGGATCTGGCTTAGAGGTGTGGTCAAAAGAGGGGATGGCTCGATGAAGGCGCATGTGCGTGGGGGCGAAGATTGGCTAACTTGGACCGGTGATGCGACTCGCAATGGAGCTACAGCTGGCGGATGGAGGATGGCTGAACTGAGACGACAGTGATCCGGCGCAATGGAGAAATCGCAACGAACAACGGAGTTCTCACACTCGATGCTTCACGACGACGAATAGATCTGGGTGGCGAGAGATGGAATTTGACGTCGGATGGAGATGGTGAGCGACGGGCTAGGGTTTTGCAAGGAAGAAGTTGGATAGTTTTGAGGGTTTTTGCAGGCATCACGAGAGCTATGTATAACAACAACAACAACATCATCATTATTATTTATTTTTCCCAAATATCTAAATTTTCCTTCTCTTCCTATTCCTTTTTCCAAAAACAAAACAAAAAATTCATATTTTCTCTCTCCCATAAATAACCCAAACAATCACTTTTTCCTACTTATCTCCATCACATCACATTTCTCT

mRNA sequence

ATGGTTCACGTGACTCGAGTAGAAGGCTGGGCTTGGATCTGGCTTAGAGGTGTGGTCAAAAGAGGGGATGGCTCGATGAAGGCGCATGTGCGTGGGGGCGAAGATTGGCTAACTTGGACCGGTGATGCGACTCGCAATGGAGCTACAGCTGGCGGATGGAGGATGGCTGAACTGAGACGACAGTGA

Coding sequence (CDS)

ATGGTTCACGTGACTCGAGTAGAAGGCTGGGCTTGGATCTGGCTTAGAGGTGTGGTCAAAAGAGGGGATGGCTCGATGAAGGCGCATGTGCGTGGGGGCGAAGATTGGCTAACTTGGACCGGTGATGCGACTCGCAATGGAGCTACAGCTGGCGGATGGAGGATGGCTGAACTGAGACGACAGTGA

Protein sequence

MVHVTRVEGWAWIWLRGVVKRGDGSMKAHVRGGEDWLTWTGDATRNGATAGGWRMAELRRQ*
Homology
[Close]
BLAST of CsaV3_4G029600 vs. NCBI nr
Match: KAE8649678.1 (hypothetical protein Csa_012123 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 5.1e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MVHVTRVEGWAWIWLRGVVKRGDGSMKAHVRGGEDWLTWTGDATRNGATAGGWRMAELRR 60
          MVHVTRVEGWAWIWLRGVVKRGDGSMKAHVRGGEDWLTWTGDATRNGATAGGWRMAELRR
Sbjct: 1  MVHVTRVEGWAWIWLRGVVKRGDGSMKAHVRGGEDWLTWTGDATRNGATAGGWRMAELRR 60

Query: 61 Q 62
          Q
Sbjct: 61 Q 61

[Close]
BLAST of CsaV3_4G029600 vs. NCBI nr
Match: KGN54712.1 (hypothetical protein Csa_012809 [Cucumis sativus])

HSP 1 Score: 65.1 bits (157), Expect = 2.5e-07
Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 0 

Query: 1  MVHVTRVEGWAWIWLRGVVKRGDGSMKAHVRGGEDWLTWTGDATRNGATA--GGW 54
          MVH  RVEGWA IWL GV + GD S+KAHVR  ED L  TG+ +R+GAT   GGW
Sbjct: 1  MVHAARVEGWAQIWLGGVTQTGDDSVKAHVREREDGLR-TGELSRDGATPTDGGW 54

[Close]
BLAST of CsaV3_4G029600 vs. ExPASy TrEMBL
Match: A0A0A0L277 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G431920 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-07
Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 0 

Query: 1  MVHVTRVEGWAWIWLRGVVKRGDGSMKAHVRGGEDWLTWTGDATRNGATA--GGW 54
          MVH  RVEGWA IWL GV + GD S+KAHVR  ED L  TG+ +R+GAT   GGW
Sbjct: 1  MVHAARVEGWAQIWLGGVTQTGDDSVKAHVREREDGLR-TGELSRDGATPTDGGW 54

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029600 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649678.15.1e-29100.00hypothetical protein Csa_012123 [Cucumis sativus][more]
KGN54712.12.5e-0761.82hypothetical protein Csa_012809 [Cucumis sativus][more]
BLAST of CsaV3_4G029600 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2771.2e-0761.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G431920 PE=4 SV=1[more]
BLAST of CsaV3_4G029600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029600.1CsaV3_4G029600.1mRNA