CsaV3_4G029520 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029520
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 19078369 .. 19078623 (-)
RNA-Seq ExpressionCsaV3_4G029520
SyntenyCsaV3_4G029520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTTCGTAGTGGAGCTAGCGGTGAATGACGCACGTTTACGGCTTTATTCTGGTGGTGATCGACGTCGGGTAGAAGCATTTTTTAGGCATTGTTTTTGCGTTTCTACGAGTCATTCAACATTGGGTTTCGACCGGGTTTGCTTCAGTATTGGGTTTTCTACGGGTTTGGATCTCGGTATCAGAGGTTTTAGTGTTGGTCTCTCATCCTTCTTGGCATTTGGTTGGCGGTATAGTCGGGCTTGTCTTGGTTGA

mRNA sequence

ATGACGTTCGTAGTGGAGCTAGCGGTGAATGACGCACGTTTACGGCTTTATTCTGGTGGTGATCGACGTCGGGTAGAAGCATTTTTTAGGCATTGTTTTTGCGTTTCTACGAGTCATTCAACATTGGGTTTCGACCGGGTTTGCTTCAGTATTGGGTTTTCTACGGGTTTGGATCTCGGTATCAGAGGTTTTAGTGTTGGTCTCTCATCCTTCTTGGCATTTGGTTGGCGGTATAGTCGGGCTTGTCTTGGTTGA

Coding sequence (CDS)

ATGACGTTCGTAGTGGAGCTAGCGGTGAATGACGCACGTTTACGGCTTTATTCTGGTGGTGATCGACGTCGGGTAGAAGCATTTTTTAGGCATTGTTTTTGCGTTTCTACGAGTCATTCAACATTGGGTTTCGACCGGGTTTGCTTCAGTATTGGGTTTTCTACGGGTTTGGATCTCGGTATCAGAGGTTTTAGTGTTGGTCTCTCATCCTTCTTGGCATTTGGTTGGCGGTATAGTCGGGCTTGTCTTGGTTGA

Protein sequence

MTFVVELAVNDARLRLYSGGDRRRVEAFFRHCFCVSTSHSTLGFDRVCFSIGFSTGLDLGIRGFSVGLSSFLAFGWRYSRACLG*
Homology
[Close]
BLAST of CsaV3_4G029520 vs. NCBI nr
Match: KGN54705.1 (hypothetical protein Csa_012086 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 1.8e-40
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MTFVVELAVNDARLRLYSGGDRRRVEAFFRHCFCVSTSHSTLGFDRVCFSIGFSTGLDLG 60
          MTFVVELAVNDARLRLYSGGDRRRVEAFFRHCFCVSTSHSTLGFDRVCFSIGFSTGLDLG
Sbjct: 1  MTFVVELAVNDARLRLYSGGDRRRVEAFFRHCFCVSTSHSTLGFDRVCFSIGFSTGLDLG 60

Query: 61 IRGFSVGLSSFLAFGWRYSRACLG 85
          IRGFSVGLSSFLAFGWRYSRACLG
Sbjct: 61 IRGFSVGLSSFLAFGWRYSRACLG 84

[Close]
BLAST of CsaV3_4G029520 vs. ExPASy TrEMBL
Match: A0A0A0KYF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G430870 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 8.6e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MTFVVELAVNDARLRLYSGGDRRRVEAFFRHCFCVSTSHSTLGFDRVCFSIGFSTGLDLG 60
          MTFVVELAVNDARLRLYSGGDRRRVEAFFRHCFCVSTSHSTLGFDRVCFSIGFSTGLDLG
Sbjct: 1  MTFVVELAVNDARLRLYSGGDRRRVEAFFRHCFCVSTSHSTLGFDRVCFSIGFSTGLDLG 60

Query: 61 IRGFSVGLSSFLAFGWRYSRACLG 85
          IRGFSVGLSSFLAFGWRYSRACLG
Sbjct: 61 IRGFSVGLSSFLAFGWRYSRACLG 84

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029520 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54705.11.8e-40100.00hypothetical protein Csa_012086 [Cucumis sativus][more]
BLAST of CsaV3_4G029520 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYF58.6e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G430870 PE=4 SV=1[more]
BLAST of CsaV3_4G029520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029520.1CsaV3_4G029520.1mRNA