CsaV3_4G029280 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029280
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 18766317 .. 18766508 (-)
RNA-Seq ExpressionCsaV3_4G029280
SyntenyCsaV3_4G029280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGCCTCTTCATTACAGATTCATCTCCGATTTGACGTGGTTCGAATCCATGATGTCGTGCCTCTTCGTTCCAGATCAGTGTCACCTGGTTGTCGTACTGCTCACCTGCGTTCTAACGCTCTGCCTCTTCGTTCGCATCAGTTGTCGAACTATCTCTTGTTTTCATTGTTTGTCACTGTCTGTATCTGA

mRNA sequence

ATGCCTGCCTCTTCATTACAGATTCATCTCCGATTTGACGTGGTTCGAATCCATGATGTCGTGCCTCTTCGTTCCAGATCAGTGTCACCTGGTTGTCGTACTGCTCACCTGCGTTCTAACGCTCTGCCTCTTCGTTCGCATCAGTTGTCGAACTATCTCTTGTTTTCATTGTTTGTCACTGTCTGTATCTGA

Coding sequence (CDS)

ATGCCTGCCTCTTCATTACAGATTCATCTCCGATTTGACGTGGTTCGAATCCATGATGTCGTGCCTCTTCGTTCCAGATCAGTGTCACCTGGTTGTCGTACTGCTCACCTGCGTTCTAACGCTCTGCCTCTTCGTTCGCATCAGTTGTCGAACTATCTCTTGTTTTCATTGTTTGTCACTGTCTGTATCTGA

Protein sequence

MPASSLQIHLRFDVVRIHDVVPLRSRSVSPGCRTAHLRSNALPLRSHQLSNYLLFSLFVTVCI*
Homology
[Close]
BLAST of CsaV3_4G029280 vs. NCBI nr
Match: KGN54679.1 (hypothetical protein Csa_012173 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 2.4e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MPASSLQIHLRFDVVRIHDVVPLRSRSVSPGCRTAHLRSNALPLRSHQLSNYLLFSLFVT 60
          MPASSLQIHLRFDVVRIHDVVPLRSRSVSPGCRTAHLRSNALPLRSHQLSNYLLFSLFVT
Sbjct: 1  MPASSLQIHLRFDVVRIHDVVPLRSRSVSPGCRTAHLRSNALPLRSHQLSNYLLFSLFVT 60

Query: 61 VCI 64
          VCI
Sbjct: 61 VCI 63

[Close]
BLAST of CsaV3_4G029280 vs. ExPASy TrEMBL
Match: A0A0A0L0U8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420200 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MPASSLQIHLRFDVVRIHDVVPLRSRSVSPGCRTAHLRSNALPLRSHQLSNYLLFSLFVT 60
          MPASSLQIHLRFDVVRIHDVVPLRSRSVSPGCRTAHLRSNALPLRSHQLSNYLLFSLFVT
Sbjct: 1  MPASSLQIHLRFDVVRIHDVVPLRSRSVSPGCRTAHLRSNALPLRSHQLSNYLLFSLFVT 60

Query: 61 VCI 64
          VCI
Sbjct: 61 VCI 63

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029280 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54679.12.4e-26100.00hypothetical protein Csa_012173 [Cucumis sativus][more]
BLAST of CsaV3_4G029280 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0U81.2e-26100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420200 PE=4 SV=1[more]
BLAST of CsaV3_4G029280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029280.1CsaV3_4G029280.1mRNA