CsaV3_4G028780 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G028780
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 18254713 .. 18254907 (+)
RNA-Seq ExpressionCsaV3_4G028780
SyntenyCsaV3_4G028780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGAACACAAAACGAAAGAAGACAAACCAGAGCGCATGGACTTTGACAGAGATGGAGTTGACTAGGAGACACGACTTGACGTGGAGTTCAAAGGGAGATGCTCGACTTGGCATGGAGTTCCTGAGGCTTAGATCGACGGGCGCAGAGGTGGTGCACTTGGAAGTTCAATGGGTAGCAGGGAGTGCACGAGAATGA

mRNA sequence

ACGAACACAAAACGAAAGAAGACAAACCAGAGCGCATGGACTTTGACAGAGATGGAGTTGACTAGGAGACACGACTTGACGTGGAGTTCAAAGGGAGATGCTCGACTTGGCATGGAGTTCCTGAGGCTTAGATCGACGGGCGCAGAGGTGGTGCACTTGGAAGTTCAATGGGTAGCAGGGAGTGCACGAGAATGA

Coding sequence (CDS)

ACGAACACAAAACGAAAGAAGACAAACCAGAGCGCATGGACTTTGACAGAGATGGAGTTGACTAGGAGACACGACTTGACGTGGAGTTCAAAGGGAGATGCTCGACTTGGCATGGAGTTCCTGAGGCTTAGATCGACGGGCGCAGAGGTGGTGCACTTGGAAGTTCAATGGGTAGCAGGGAGTGCACGAGAATGA

Protein sequence

TNTKRKKTNQSAWTLTEMELTRRHDLTWSSKGDARLGMEFLRLRSTGAEVVHLEVQWVAGSARE*
Homology
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BLAST of CsaV3_4G028780 vs. NCBI nr
Match: KAE8649643.1 (hypothetical protein Csa_012186, partial [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 6.5e-27
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  TNTKRKKTNQSAWTLTEMELTRRHDLTWSSKGDARLGMEFLRLRSTGAEVVHLEVQWVAG 60
          TNTKRKKTNQSAWTLTEMELTRRHDLTWSSKGDARLGMEFLRLRSTGAEVVHLEVQWVAG
Sbjct: 1  TNTKRKKTNQSAWTLTEMELTRRHDLTWSSKGDARLGMEFLRLRSTGAEVVHLEVQWVAG 60

Query: 61 SARE 65
          SARE
Sbjct: 61 SARE 64

The following BLAST results are available for this feature:
BLAST of CsaV3_4G028780 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649643.16.5e-27100.00hypothetical protein Csa_012186, partial [Cucumis sativus][more]
BLAST of CsaV3_4G028780 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G028780 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G028780 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G028780.1CsaV3_4G028780.1mRNA