CsaV3_4G028620 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGGTTTTGCTGTTGGACTGAATAAACTGCTCTCTTTTTCTCTCTCTAAAATATAGGATCCCCTTCAACAAATCATCATCTGCCAGATCCTTTCCTATCTGATTTATGAGTTTCTCCTCAAAACTTCCCACCAATTTCCCTTCTTTCACTTCTTTCATCATTTTTCTCACTCTGCAGATTTTGAAGTAGCTGATAGGAACATTAAACACAAGTGGTACGGTGCAGGGGAAGAAGAAACCAGTATTAGGATAGGAAATGAATTTAGATGAATTAGTTTTGAGGAATGTGATGTCTGTGGAAGAGGCAGAGCTAGTACATAACTCTTCTTCTTCACCTCCTGCAGCAGCCACAGTTTCGTTGTTTCTCGGAAAAAGGAACAAGGACATTAAACCGCAGCCTGATCCAATGGCTGAGGCTTCGGCCTCCGCAGAAGGGATGGATTGGATTCATTACCAACGAGCATTGTTGATTGATTCCAAGTTGCCAGTTTCTCAAGGTGTTTACAATCATGGGAGTGTAGCAGGTATTGGTGTTTACAATATGGAAGCCATGTCAATGACAACGTCAGCCTCGTCGAACTCAGATTTCCAAGAAGGTAATAATTGTGGACGGAAACGAAGACAGGTGGATGATATGAAGGAGAAGACCATTGAAAGAAGGCAAAGGAGGATGATCAAGAATCGTGAGTCTGCTGCAAGGTCCAGAGCCAGAAAACAGGTAAATTCATGAAATTTGTTCTTGGTAGCATGCATTTATTTTTTAAATTTCCATAAACTTTAGAACAAATGACAACATTTTTTTGTGTATACCGTCATATTTTTGTTTGTTTTAACACTCTAGGCTTATACGAATCAGCTGGAGCACGAAGTATCTTGCTTGAAGAAAACAAATAGTTGGCTGAGAAAGCAAGAGGCAAGTACATCCACTACAGCTTATAGTTCTACCAGACAGTTATATTTTGTTTACATACTAAAAAACTATAGTTTCCTTTTCTTTTTCAGGAAGCAGAAGGACTATTTTCTTCAAATCCAATCCCAATGCCAAGACACCAACTGCGGCGCACCAGCTCGGCCTTCTTCTAGCTCCTGATCTTCACAAGCAGACCTGACTCTGTTCTCTCTCTCAAGTTTTTTCTAGTTAGATTATTTTGAAACACATAGAACTTTACTTTCCTTCTGTTTCATGTAGAAAAAAATACTCTGATGGAAAATATCTTTGCTTGTGAATGCAGTTCCTATTCTTC ATGAATTTAGATGAATTAGTTTTGAGGAATGTGATGTCTGTGGAAGAGGCAGAGCTAGTACATAACTCTTCTTCTTCACCTCCTGCAGCAGCCACAGTTTCGTTGTTTCTCGGAAAAAGGAACAAGGACATTAAACCGCAGCCTGATCCAATGGCTGAGGCTTCGGCCTCCGCAGAAGGGATGGATTGGATTCATTACCAACGAGCATTGTTGATTGATTCCAAGTTGCCAGTTTCTCAAGGTGTTTACAATCATGGGAGTGTAGCAGGTATTGGTGTTTACAATATGGAAGCCATGTCAATGACAACGTCAGCCTCGTCGAACTCAGATTTCCAAGAAGGTAATAATTGTGGACGGAAACGAAGACAGGTGGATGATATGAAGGAGAAGACCATTGAAAGAAGGCAAAGGAGGATGATCAAGAATCGTGAGTCTGCTGCAAGGTCCAGAGCCAGAAAACAGGCTTATACGAATCAGCTGGAGCACGAAGTATCTTGCTTGAAGAAAACAAATAGTTGGCTGAGAAAGCAAGAGGCAACAGAAGGACTATTTTCTTCAAATCCAATCCCAATGCCAAGACACCAACTGCGGCGCACCAGCTCGGCCTTCTTCTAG ATGAATTTAGATGAATTAGTTTTGAGGAATGTGATGTCTGTGGAAGAGGCAGAGCTAGTACATAACTCTTCTTCTTCACCTCCTGCAGCAGCCACAGTTTCGTTGTTTCTCGGAAAAAGGAACAAGGACATTAAACCGCAGCCTGATCCAATGGCTGAGGCTTCGGCCTCCGCAGAAGGGATGGATTGGATTCATTACCAACGAGCATTGTTGATTGATTCCAAGTTGCCAGTTTCTCAAGGTGTTTACAATCATGGGAGTGTAGCAGGTATTGGTGTTTACAATATGGAAGCCATGTCAATGACAACGTCAGCCTCGTCGAACTCAGATTTCCAAGAAGGTAATAATTGTGGACGGAAACGAAGACAGGTGGATGATATGAAGGAGAAGACCATTGAAAGAAGGCAAAGGAGGATGATCAAGAATCGTGAGTCTGCTGCAAGGTCCAGAGCCAGAAAACAGGCTTATACGAATCAGCTGGAGCACGAAGTATCTTGCTTGAAGAAAACAAATAGTTGGCTGAGAAAGCAAGAGGCAACAGAAGGACTATTTTCTTCAAATCCAATCCCAATGCCAAGACACCAACTGCGGCGCACCAGCTCGGCCTTCTTCTAG MNLDELVLRNVMSVEEAELVHNSSSSPPAAATVSLFLGKRNKDIKPQPDPMAEASASAEGMDWIHYQRALLIDSKLPVSQGVYNHGSVAGIGVYNMEAMSMTTSASSNSDFQEGNNCGRKRRQVDDMKEKTIERRQRRMIKNRESAARSRARKQAYTNQLEHEVSCLKKTNSWLRKQEATEGLFSSNPIPMPRHQLRRTSSAFF* Homology
BLAST of CsaV3_4G028620 vs. NCBI nr
Match: KAE8649636.1 (hypothetical protein Csa_011961 [Cucumis sativus]) HSP 1 Score: 393.7 bits (1010), Expect = 1.0e-105 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. NCBI nr
Match: XP_011653821.1 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Cucumis sativus]) HSP 1 Score: 389.8 bits (1000), Expect = 1.4e-104 Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. NCBI nr
Match: XP_038899164.1 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Benincasa hispida]) HSP 1 Score: 340.1 bits (871), Expect = 1.3e-89 Identity = 177/204 (86.76%), Postives = 189/204 (92.65%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. NCBI nr
Match: KAA0064250.1 (protein ABSCISIC ACID-INSENSITIVE 5-like [Cucumis melo var. makuwa] >TYK18619.1 protein ABSCISIC ACID-INSENSITIVE 5-like [Cucumis melo var. makuwa]) HSP 1 Score: 314.3 bits (804), Expect = 7.7e-82 Identity = 177/205 (86.34%), Postives = 180/205 (87.80%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. NCBI nr
Match: XP_022977180.1 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Cucurbita maxima]) HSP 1 Score: 312.4 bits (799), Expect = 2.9e-81 Identity = 170/209 (81.34%), Postives = 186/209 (89.00%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy Swiss-Prot
Match: Q9LES3 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DPBF3 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 4.8e-18 Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy Swiss-Prot
Match: Q9C5Q2 (ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=DPBF4 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.8e-15 Identity = 47/83 (56.63%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy Swiss-Prot
Match: Q9M7Q2 (ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=ABF4 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11 Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy Swiss-Prot
Match: Q9SJN0 (Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana OX=3702 GN=ABI5 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.7e-10 Identity = 75/198 (37.88%), Postives = 94/198 (47.47%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy Swiss-Prot
Match: Q8RZ35 (bZIP transcription factor ABI5 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=ABI5 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy TrEMBL
Match: A0A0A0L0N5 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G377720 PE=4 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 7.0e-105 Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy TrEMBL
Match: A0A5D3D502 (Protein ABSCISIC ACID-INSENSITIVE 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001540 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.7e-82 Identity = 177/205 (86.34%), Postives = 180/205 (87.80%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy TrEMBL
Match: A0A6J1ILK8 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111477334 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.4e-81 Identity = 170/209 (81.34%), Postives = 186/209 (89.00%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy TrEMBL
Match: A0A6J1FFI8 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111443491 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 7.0e-81 Identity = 170/215 (79.07%), Postives = 186/215 (86.51%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. ExPASy TrEMBL
Match: A0A1S3BAD3 (protein ABSCISIC ACID-INSENSITIVE 5-like OS=Cucumis melo OX=3656 GN=LOC103487554 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 4.6e-80 Identity = 168/183 (91.80%), Postives = 172/183 (93.99%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. TAIR 10
Match: AT3G56850.1 (ABA-responsive element binding protein 3 ) HSP 1 Score: 92.8 bits (229), Expect = 3.4e-19 Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. TAIR 10
Match: AT2G41070.1 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 83.2 bits (204), Expect = 2.7e-16 Identity = 47/83 (56.63%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. TAIR 10
Match: AT2G41070.3 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 83.2 bits (204), Expect = 2.7e-16 Identity = 47/83 (56.63%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. TAIR 10
Match: AT2G41070.2 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 83.2 bits (204), Expect = 2.7e-16 Identity = 47/83 (56.63%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of CsaV3_4G028620 vs. TAIR 10
Match: AT3G19290.1 (ABRE binding factor 4 ) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12 Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|