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CsaV3_4G028320 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGAAACGTTCTTTATTTTTTTTTGAAGTCTTAGATAATTTCATACAAAATAATAATAATAATAATAATAATAATAATAATAAAAGATGGTATTTAAACAAAAACGCCAAGTGGTGACAAAACTACGTTCCAGAAAGGGTCAACAAATAAACCAAATCGTGAAGGAACTCACGAAGCAGTCCTTTCAATAAGAATGGCCCATTTCTCACTCTTCCAAAATAATCTTTCCTACTCCTAAAAAAAGCTTTCTTTTATTTTATTTCACAAACCATATATCTTGGTAATGATAGATTTTTTCAAATCAAACAATTAAAAAAGAAAAAAAAATTCTGAAACAGATGCAAGCCATAATAGTACAGAGAGTCTTCCCTATCATCATCAAAATAGGCAGTAGCGGTACTGTTTTTATTTGCATCAATGTTATAAGTAATCTGTAAAGGTAACATCAACTCAGTCCCTCCCGTGACTCATATCACGGCTTTGTATTTATCACTCGGTCCCATCTTAACCCCCCTCCTTTCAAACTTTCTCTCTCTCTCTCTCTCCTAAAAAAAAAAAACTTAAAGTTTCTATATAACCAACTTCCTAGAGGAAAAGGGGTTCATTTTTTAAGGCATTGAAAGAGAGGGTTAGTGAAAGAGAGGGTTGAAGACTTCAAAAATCTAAGAGGGTGGGGTGAAGTGGGGTTTGATTTTTACCCTACAAGAAAGTTTGGTGTGCAGCAAAAAGAAGCTTTTAAACTGGGTGTCAATGGAAGGGTTCGAGAGGTATGGTAAGAAGAGGGTGATGGTCGTGGTGGATCATACATCAAATTCTAAGCATGCTATGTTGTGGGCTCTGACTCATGTGGCTAATAAGGGTGATTTGGTCACTCTTCTTCATATTGTTTCTCACTCAACAAACAGGCTCTCTGAAATGCCTTCTGATTCTTCTTCTTCCTCCTCATTTCTTGCTAATTCTCTTGGCTATCTCTGCAAAGCTTCTAGACCTGAGGTATTAACTTCTGTTTTGATTCTTTAGTGTAGTATTCTTCAATTTGGATTTTTAACCTTTGGGTTGGATTTATCTAGTGTAAAGATGTTGGATGGATTATTATACTTCCAGCTAGTCCCTGTCCTTCATCGTTTTTACTTGAATCTTCTATCCTATCTCAGTTGTTTGTAAACAACAATGAACTTAATTCTTAAGCTCTGCTTGAGATATACATATTAATACTTTTGTTATACGATACATACATCAAATTCAATTTCTACTTCTCTATCTGACTTGAAGAGTATGTGTGGGATATGGGCCATATGGGGAACTTCATATTGGGTTTTTTCTAATTTAATCCCTCGGGTTTTCCGACCAATGCATGTGTTAATAAATAAAATAAAGGTAAAAAACAAAACATATATAGCAAGGAGAGAAACGGTCGCAAAAAAAAAAAATAGTGAGGAGAAAAATCTCGAGTTGCACTAAGCTATTGGCTAGTAGCTTAGCCGTTTCCTAGTGCTCCCCCATTTTTCAGATTAGAGTGCCATCTTTGTAAATGACGTAGAAAGGAGTTAAATGAGGTGGAACCAACTTTTAAAGTAGCTTAAAATACCATTTTGGCTCTCATATTTTGATGTTTCTCGAATCTTAGTCCCTATTTTAGTCTTTAATACTTTTATTAAATCTTAATTTAGTTCCTCAAAGTTAAAATTTACAGATATTGATTAAATACTAATAACAATTAACATGCAAGAAAATACAACTGAGCATATATTTTCAAGATTTATAGTCAAAATGTTATAGATAACAAAAATATTTTTAAAAGATAAAATATACGAACTAAGATTTAAAATTTTGGTGGCTAAAATAAAATTTTAGCTTTTTAACTTTTAAGTATTGCATCAGTGCAGTGTTGGGTTCAGTGAGTGACCTAATTTTTGGTGCAAAATTTCAGGTAGAAGTTGAAGCACTGGTGATTCAAGGCCCAAAACTAGAGACAGTTTTGAGCCAAGTGAAGAAGCTTGAGGCATCTGTTTTGGTGGTACCCCAGAAAAAGCCTTCACTTTTTGGTTGGTGGGTCCCAACACTCCCATCATCTTATATAGAAGCCTTTTTTTCAACCAAAGAAAAAACAGTAAAAAGTTTGAATGGTTATGATTACTAACCTGGTGGACATGGCAATTTATTTCTCTTGCAGCTTCTGTGGGACCAACAGCTCAGAGCAGCTTGTTGAACAGTGCATCAACCATGCAGATTGCTGTACAATTGGGGTTAGAAGACAGACCAATGGCATGGGAGGTTACCTTATCAACACCAGATGGCAGAAGAACTTCTGGCTTCTTGCTTAGTTGTCTTCTTCTACATTTAACAGACAAAAAAATATCACCAATGCATTGTCCATCATGTTAGCTCTAATCTTAATCTTAACCCTGTAACTAAAAGGAATGAGCTAGATGCTCTTTAGATTGTAGAACTCTTCATCGTAGTTCAATGTATTCCTCTTCCCTAAGCATTTTCATAATCAGAAATTCACATCTTTCATTCCAACGGGATATAATAATTGATCATTCAGATGAATTTGGAACTAAGATAGTTTCCAAGCAAAGCCACGTCAGAAACCTGGGAATTTTTTTTCTGTTTAGGTTTTAGAAATTGAATAGAGAAAGCAAGATTAAGAAGAAAAATGATTGGAACTCTAATAATATAATTGCCTCTTTAATCAGAGGCATGAGATAACTAGTAAAAAAAGGTAATATCAGTCGCTCGTTGATATGCTAAAGCTGCAAATAACAAAATATGTGGGCGGGGAGATAAAAAGAAAGCATTATGAATAAGAAAAATTGAAATCGCCTAAAGCAAGTGGACAGAACGAACAAGCCCAAGTATTCTGCTTTTGTATTCTTTTCATCTTTTGTACTCTCCTTTCTCTACTATTGGTGTGCCAACTACTAAGAACACATCAACCGCATTGCAGCCAATTAGACCTTATCATCTAATTTGTCATTTACAAGGGGAAGCAGCTCCATCCGACTCCGAGGTGTCCTAGGTGTTCTTGGAGTTCGAGGGGTTCCAGGTGGCTGCTGTGAGATAAGATGTCTTACATACCCGTAGAATGTACAACCCAAAAGTGTAATCGCACACCCAACTGCATTTAGCATTGAAATTGGGTTTCGGAATATCAACCATGAAACCAGGACAGCAACAGCTACCTGGGCATAATGAAATTCACACGTAACTCACCAGAGTATTAAGAAAGGAAATTTGAATAAAGAAAAGGAAATTATAATGGTTTATAAGACTTTAATCCAATGCCAATGGTATCAAGGAGGTCCTACCTTAAGGTTTCCAGCAACATTGAATGTGACGGCAGTGGTGGAATGAATTACATAAAATATGGAGAAGTTAAGACAGAAAGCCATAACCCCAGAACTGAAAATGATGATGAGTGACGAGCAAATAGATTGGTGCGTGTGAAGCCAATCAAGAACCCCGTTACCTTCAAGGAGCATAGCAGGTACAGCCAAGATCATCGTCGCGAAAGGCGCCATGTAATAGACTGTATTAATGCTGATGTTAAAGAAAAAGCAAACACCAAAGATCAAACATTATTAGGAACATATAGAGAATAGCAAAACGAACCATTAGCACAAAATGCATGTTCCCTGGATGGTATAAAATTAAAGGAAAATGAGAATCAGCAAGGGAGGGGGAACAAGAGGGTTCAACTACCTTTAAAGGCCAATTAATGTTGGATCGAACCATTTCAAATTTAGATGAGGAAGGAAAAATCCATTCCATTTAACCATCCATGCCAGTGATAATACATACATGTACAATTGACGAAGGATACAACATGAAACATGAGTTTGTACTATTAAACAACAAAAACATGGCCATGAAAAGGAGAATGATGCATGGATCTCACATACATATACTCGAGTCATTAAAAAATTAATTTATATAAGGACTACAAGTATAAAATCAAGATTATAATCAAGAAAACTTAATATTATGAAGGCACTATACACAAATTGCATCCAAATAATACAACACCTGATGACAAGTACTAGCAAAAAAAAAAATCAAATTAGTAAATGTTTAATGATTCAACTTCTATATAAAAAGATATAGAATATTCAAAAACATATGTATTCGTACAATTATGTAATCTTAATAATTTATATTCCATTATCCATCACTTGTCTAGTTTTCGTTGTGTTTTGTTGAGGAGGGCCAAAACAGCCTCAAGAACACGTCTTATGTAACTGAGAAGAAAAAAATTGTAATTAATCATATTATAATTTGAGTGACTTATTTGTATCAGAATGTCAACGCTGGTGTCTGGTGAAGGTGGACAGTAACAAACTACCAAAACTAATGTACTTGAATTCACCACCAAAGGGTGCGAGAAAGGTAACTGACAGCACGATATTTTGACAACATTGGCAGGAATTGATAAAAAATGAAAAACCTTGAGTTGCTAAAGAGTGATAAAACGGTCTGCAGCCAAAAAACTAAAAAAATACTAGTAATGGGAAATCGATCTTCAGAGATAGCAATGTTTTCTTTACAGATCCAAAGAAGAACAAAAAACAGAGAAAAAGGCAGCAAGAATTAGAAAGTGGTGAAGACTGAAGAATAATGAAGAGATACATTAATCGTTCATTGTCGACTAGGAAAAACTTTCAAGATCTTTTCCAATTCATCCAACCAAAACTAACCACTGATGCATAAATGTAAACAAATTCCCTTTGGAAGTATTTTCAGATTTTTGATCCATATTTGATACATGTCAATAAGAAGACAGAGGAACTAAATGCCAAGAAGGGAATTGGCTTTTCAATGACTATGATCCTACCGACTGCATGAACGTTACTGAACATATCAAATGTTTGTACTTCAATGGTACCCGTATCTCGAAATAAGGGTTTTCAAGCAACAACAATCTAACTCAACCCAGAAAAAAAAATGTAACAACCAGGAATTCAGGATGAAACTTGGTTATAAAAGAAACATTGCATCCAAAAAGAATTAGGTAGGCAAAAAGGCGGTACCTATCGAACTTGTATCCATGCAATAAGGATTCGGCAAGGATGGTCTTTGTGGAGGTAGCCAAACAACCAAATAAGGCAGCACAAAACCCAAGCATGTTAAAGCTCATTTCAGTCACAGAAGTAAGAAGAATTCCTCCAACAATGGGTATTAAAGATGCCCATATTCTCCAGTCAAAGTACTTTCTCCATACAAGCCATTGTAAAACAACTGTTAAAAGATAAAGAAAATCAACAACACAATTTTAAAATTGAAAAAAAAAAATAGAACAATTACAAACACAACAGAATTATGAATTAACAATTAAAATTCAAAAACCACACCTGTTGTTGCAGGGGTAAAAGACTTTATTGTCTGCATAAAAGAAACCGGAATATAACGCAAGCTGACATTCCCTAAAACTATGTTAATACAAAACACAAATGACATCGGGAATATCCTTCTCCACCGATCTTCAGGGTCAACAGAAATCAGCGGTTTAACTTTCAACACTTTAATCGCCATATACGCTCCAATGGCAGAGCAGACGAAGTGAATGCAAGATACTGTTAAAGGGAATTTAAAATCCAATTTCTGCAGGAGAAAAAAAACAAAAGACAGATCAATTTACACAACCAAATCAACCTAATCGAGAAATGAAGAAAAAAAAATTCAGCAATACCTGAAAGATCCACTTGTTCATGATAATGACGGTGACATTGAAACCCCACCATTGAAGAATTGCAAAGAGAGATCTAATGGTAGTCCACTGGCACAACCGAGCTTCCTCCATCTCTCTAGTGTAAGACCCCCAGATCACGAAATAAGAAACAGCAAAATCCCAATAGAATAAAGAGAAAACAAAACCTGAATTTGGAAATGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAAGAAAAGGAAGGAAGGGTCCAATTCAGCGTAGTTGAGAGGTGAGGGAATGGTTTAGCAGGAAGAAGTTAGAGTATATGAAACGGATGAATTTGGGGTAGAAAAAACGCAGAAGGCATGCATCTGTGCCGAGGATCGTACTTGAAATTCTCTCTCTAATTCATTGAAATTGAAATCCTCAAAAGAAAGGAAAAAAAAAACGCTTATTTGTTTAACTTAGGGTCTGTGCTGAAAAGGAAGAAGAAGAAGGGGATGGCCATGGCGATTGATTCAGAATTTGGATTTGGCTAATTGCTTCCTTCTTTTGGGTTTTATATTTTATTCTATTCTTTTTTACCCTTTTTCAAAAAATT ATGGAAGGGTTCGAGAGGTATGGTAAGAAGAGGGTGATGGTCGTGGTGGATCATACATCAAATTCTAAGCATGCTATGTTGTGGGCTCTGACTCATGTGGCTAATAAGGGTGATTTGGTCACTCTTCTTCATATTGTTTCTCACTCAACAAACAGGCTCTCTGAAATGCCTTCTGATTCTTCTTCTTCCTCCTCATTTCTTGCTAATTCTCTTGGCTATCTCTGCAAAGCTTCTAGACCTGAGGTAGAAGTTGAAGCACTGGTGATTCAAGGCCCAAAACTAGAGACAGTTTTGAGCCAAGTGAAGAAGCTTGAGGCATCTGTTTTGGTGGTACCCCAGAAAAAGCCTTCACTTTTTGGTTGCTTCTGTGGGACCAACAGCTCAGAGCAGCTTGTTGAACAGTGCATCAACCATGCAGATTGCTGTACAATTGGGGTTAGAAGACAGACCAATGGCATGGGAGGTTACCTTATCAACACCAGATGGCAGAAGAACTTCTGGCTTCTTGCTTAG ATGGAAGGGTTCGAGAGGTATGGTAAGAAGAGGGTGATGGTCGTGGTGGATCATACATCAAATTCTAAGCATGCTATGTTGTGGGCTCTGACTCATGTGGCTAATAAGGGTGATTTGGTCACTCTTCTTCATATTGTTTCTCACTCAACAAACAGGCTCTCTGAAATGCCTTCTGATTCTTCTTCTTCCTCCTCATTTCTTGCTAATTCTCTTGGCTATCTCTGCAAAGCTTCTAGACCTGAGGTAGAAGTTGAAGCACTGGTGATTCAAGGCCCAAAACTAGAGACAGTTTTGAGCCAAGTGAAGAAGCTTGAGGCATCTGTTTTGGTGGTACCCCAGAAAAAGCCTTCACTTTTTGGTTGCTTCTGTGGGACCAACAGCTCAGAGCAGCTTGTTGAACAGTGCATCAACCATGCAGATTGCTGTACAATTGGGGTTAGAAGACAGACCAATGGCATGGGAGGTTACCTTATCAACACCAGATGGCAGAAGAACTTCTGGCTTCTTGCTTAG MEGFERYGKKRVMVVVDHTSNSKHAMLWALTHVANKGDLVTLLHIVSHSTNRLSEMPSDSSSSSSFLANSLGYLCKASRPEVEVEALVIQGPKLETVLSQVKKLEASVLVVPQKKPSLFGCFCGTNSSEQLVEQCINHADCCTIGVRRQTNGMGGYLINTRWQKNFWLLA* Homology
BLAST of CsaV3_4G028320 vs. NCBI nr
Match: XP_004142622.1 (uncharacterized protein LOC101217745 [Cucumis sativus] >KGN54573.1 hypothetical protein Csa_012648 [Cucumis sativus]) HSP 1 Score: 344.4 bits (882), Expect = 5.8e-91 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. NCBI nr
Match: XP_008444147.1 (PREDICTED: uncharacterized protein LOC103487581 [Cucumis melo] >KAA0045242.1 UspA [Cucumis melo var. makuwa] >TYK19270.1 UspA [Cucumis melo var. makuwa]) HSP 1 Score: 334.3 bits (856), Expect = 6.0e-88 Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. NCBI nr
Match: XP_038898922.1 (uncharacterized protein LOC120086377 [Benincasa hispida]) HSP 1 Score: 318.2 bits (814), Expect = 4.5e-83 Identity = 160/170 (94.12%), Postives = 164/170 (96.47%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. NCBI nr
Match: XP_023523706.1 (uncharacterized protein LOC111787863 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79 Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. NCBI nr
Match: XP_022981064.1 (uncharacterized protein LOC111480323 [Cucurbita maxima] >XP_022981065.1 uncharacterized protein LOC111480323 [Cucurbita maxima]) HSP 1 Score: 305.8 bits (782), Expect = 2.3e-79 Identity = 155/170 (91.18%), Postives = 159/170 (93.53%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. ExPASy TrEMBL
Match: A0A0A0KYK7 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G364040 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 2.8e-91 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. ExPASy TrEMBL
Match: A0A5A7TPE6 (UspA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00780 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88 Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. ExPASy TrEMBL
Match: A0A1S3B978 (uncharacterized protein LOC103487581 OS=Cucumis melo OX=3656 GN=LOC103487581 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88 Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. ExPASy TrEMBL
Match: A0A6J1IYE7 (uncharacterized protein LOC111480323 OS=Cucurbita maxima OX=3661 GN=LOC111480323 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79 Identity = 155/170 (91.18%), Postives = 159/170 (93.53%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. ExPASy TrEMBL
Match: A0A6J1FAB1 (uncharacterized protein LOC111443527 OS=Cucurbita moschata OX=3662 GN=LOC111443527 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79 Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. TAIR 10
Match: AT1G44760.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-55 Identity = 112/162 (69.14%), Postives = 127/162 (78.40%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 98.2 bits (243), Expect = 6.7e-21 Identity = 56/180 (31.11%), Postives = 99/180 (55.00%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20 Identity = 60/166 (36.14%), Postives = 95/166 (57.23%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 94.0 bits (232), Expect = 1.3e-19 Identity = 64/180 (35.56%), Postives = 94/180 (52.22%), Query Frame = 0
BLAST of CsaV3_4G028320 vs. TAIR 10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 1.2e-17 Identity = 61/174 (35.06%), Postives = 89/174 (51.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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