CsaV3_4G027840 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G027840
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptiontubulin-folding cofactor B
Locationchr4: 17255170 .. 17266846 (-)
RNA-Seq ExpressionCsaV3_4G027840
SyntenyCsaV3_4G027840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGCGTAAAAAGTTGGCTTCTTTTGCTTTAAGATTGCCCTTCTTTTTCTGTTTGTATCAGCAGTAAGGATTGTGCTTAGAGTTATCAAACGACTCTCAAATGAGTGTCTTAAGTTAAAAGAGTTAAAAGAAGCTGCAAAAGAACACAACTATGGCGTCTCGATTGCAGCAGATCGAAAAGGATGAATCTGTGCTCTTGCGTGTCACCCATGCCAATCTCAAGTCCTTCACATCTGATGTTCGTTTTTCCCTTCAGGTTTGTATCATTTCTAAAGATCAGGCATCTCTTTTTAGCCTTTCCCGATTGCCCATTATGGGTTTTTATCTAAATTTGATGCTGGGGTTCTTCCATTGTAGATGAGCGTGGAGTCTGTCAAGGAAAAATTGTGGAGAAAATGTGGTACTTCTGTGAACTCTATGTGCCTCGAACTCTACGATGATTCCGGTTCTAAAATTTCCGATTTGACGGATAATTGCATTCCCTTGGGCTTCTATTCTCCCTTAGATGGGTACTTGTTCTTCTTGTTCTTCCATTTTCTTTCAATCATTTCTTTACTTGGTTTCGTTTTCCACTCTGTTAACTGCAATTCATATTGTTTCATTGATTAGAAACTCTGCTAATTTAATGGTTTTTATAAGCAGAATATGCTTTTTATGAGAATATGTGCTTTCTCTTGGAAAGGTACCGGCTGCATATTATTGATCTTGACCCCTCATCAGTTACTTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTTCCAGATCTCTGAAGAAGCCTATGATAAACGTGATGGTTAGTTTCTTGCCAAGCTTCCTGCATCATTAATGAAGTTTGCATGTAATTCTCTCAATTGCTTATCAAATAGGCTACGCTGAAGGCCTCCCCTCACACCCAATGACAATTGTTGGTCAGCCACAAGAATCATTAAACAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAAGAAGAAAAGGCTTAGGCACTGGGGACCTAGGGATCTGCAGTAGACAACTACCTTCCAACTGTCTTGAATTTGCATTTCGTGGTTCTATTTAAAAAGCTTTTGGGATAGTAAAGCTGTGCTTACATATTTAAATAATGGAAGGAAAAAAGTGTAGACGATTGATCACTATATGATGCAATTGTTTTTTCTTATTGCCTTAGATTCAATCACTTGAATGCTTCATTAACTTTCCCTTCACTAGCTCTCCCTTCCTCTATAAGAACCAATTGGATACATATATTCTGTATCTCTTGTGGTTAGCAGCCTGTTGTGTGTTTCATTATTTAAATGAAATAATCCTCAAGGCATTGTGCATGGTTTACCTTCTTCTTATGGTTTCTTTTTTCAGACACATTTAGAAAATTTAAAGAAAAATTGGCATCCCAGAATCCTTCAGCATTTGAGAGTAAAGTAAGCCTCATGTTTTCTACTTTTGCTAACAATATGAATGTCCAGAGAAATTTTATTCATTTGCGCCCTGCCAGAACTATAAATTTTGATGTAGACACTACCTATTACTTTATTTAGTTCATGGCTTTTAAAGTAGAGATCTGTGCCGGGCATCTCAGTTTTTTTTTTTAATTCTTTTTTATTTTATTACTTTGGTGTGTGTGTGTTCTGAATGATGATGCTGAGGCTGCATGGTATTTCTGCTCATGGTAGAATTGGAAACGTGTATCCTTCTTGTCTTAGTATCCTTGAGCTCTGGTTTTTGTTCTGCGTCTCTAAGAAATTTAGGGACATGTCCATCTCTATTCTAGTCATGCTTGGTCTATTCTTACTGAGTAGCAAAATATTTGCAGATATCTGATAACTACATGGAAGAGCTCTGTGCAAATATTAAGGTTAGTTACCTTCCTTGCTTTAGAAGTGTATAATGGATGTATTCAACTATAAAATTCTTATATTAAACTTTAAAGAGTTGAATTGTCAACTGTCATGATGAAAGAAATGAATTATGTGGATCAAAATTATGTGAACGAGATTGAAAGTTAATCAATCTATGACTTCCATTTTCCCCAGAGGGGTTTAGAAAATTTTTAGAATGGTGCAGTATTTGTTACTTGGTCAGGTGATTCCTAAGCGTAATTTTCCAGTCATATATTTATGTTGTCTTTTTTCTCTTTTGGAATGAGAACAACTTCTCATTAATATATGAAAAAAGGAAGAATGATCTTCAAGGATACAAGCTCCAATGGGAACAAAAATGTACAATACAAACAGAAAGGAGCCTAAAAATACATGAGGATAAAACAATGAATAACACCTAGCGAAGCAATAAAAATCACAGCCAATAATCTGCATAATAGAGCACCCTCTTCAGCTTTTATGTCAGAAACTTTGAAGGAGGACAGTATAACCAAGGCACAATTGCAGCTTTTGACCCAAAATAATGTAGCCAAGAAACAATTTCTTCTGAAACACTTCTTGCATTTGATAGAGGTAGTGCCAACAGACCAAGATCTTTGGGACTGGAAAATAAAATTTCCTCTAAAACATTCTGAGTCAGCTTAAGAAGAAACCCGATATCAAAATTCATTCTAAGGAGAACACTACCATATTCGTTTGTTAAGTACCAAATTGCTTATTCTGTAAAGCAAATTGTATCAAAGTACCTAGAGTTGATTGCTTTGAAGTTTCCCAAGATCTCTAATATGCTGTGAATAATATTCGTTGAGGGAATAGTAAAAGTATTAATTAACCTTTTATCTGATGTGAATGAGGTTGAATTTCAAGCATCTGAAAACTGAAAATCTCAATAAGAGATGAAATTTTGTTAGGATTTGAGGGAGTGGACTCTTTAAGTTCATTGACTGCTGAGAGATCTCTTTCATTATTTAAAGCCAAACCACTTCATGTAAAGCTGATTCAATAACACTGGGAGAAATTACACCTTTGAAGGTGGCTACTGATCATGTCCATTTCAAATATGTTATCATTCTTTGATTAACTTTAACCTGCAAATTCCTCTCCAAGTTTCATGAAGATGAACAACTTTTGCTTCTAAGACTAGGGCAGCTGACTGAACTGCGGGAATCACAAGTCCCAGGCAATCTTCTTAGATAGTATGTGTACTAGCCTCCGAGACTTCAGCAATGTTTTTGAGAAGACACAAAGTAGACATGCTAATAAGTAATAAATGCTCCCTTTTCTTATTACCTCGTAAATCACACAGTGTAGTCAGTGTTGACTTCTGAGTTCTGATATGTAGCATTCTTTTGAGTCTTATGTCCGGAAACTATATATTATAGGTAATGTATTTACACTCTGCTCCTTGAAATCCTGTTGTCCGGTTGTACTAAACTTGACTTTTACATGATGTAGGTTGGTGATAGATGTCAAGTTGAACCCGGGGAGAAACGGGGTGTTGTGAAATTTGTTGGCCGGGCTGAATCGCTTGCTCCTGGTTTTTGGGTTGGAGTTCAATATGATGAACCATTGGGAAAAAATGATGGCACGTAAGATGACCCTTGTGATTAATTTGTTTTTCATTGTCTCTGAAGGGACGATTGACTTGTTTTTCCCAGTTCCTACTATCTGCTTCTATTCTTCCTTATAAGAAACTTTAGTTCTTGAATGTTCACTAAAATTTTTTACCCTTCCTTTTAAAGGGAGAAAAAACATTACTACAAAATATGAACATTGGAGCACATAACCTATCAATGCCCCCCTAATTTGGAAAAATTGTTTTTATTTTAGATATAGCTGTTCTGCCAGAACCGTTTTTACTCTGATCATTCTCAAATTCTTTAGGATTTTGTGCATTATATATATGGATACTTTGTATGCTACTTCTCGTGTTATAATTTGATAAAATTATCATCATTCATTTGTGTTGATTAAAAAGTTCTTATTGGTCTTAGAATCCACCTTTTACGCAATAAAGTAATCTTCCTGGTTTCAAGTTTTTCCTCCCCACTTTAGAGATTTTGATCACATATTCTGTGGGCTAAATGTGTAAAACTCCGCAGGGTAAAAGGGATCCACTATTTTGACTGCTCTCCTTTTCATGGTGCGATGGTTAGGCCTGACAAAGTGAAGGTTCGATTTTCTGCTCCATTAATCTGTTTTCCAACTTTAAAGCTTCAAAGTATGTTACATGAAATAGTTTTTTTCCTGAACTTGGTATAATATCACATGCTTTAAATTTTTAAAAAGTAATTTATTGCTTTAGGAAAGTCAGCTTGTGGATTTGTAAATATACTACAGATGTATCTTATATTATTGGATTTCCTCAACATATTACAATATAGATGTTGATGATATATAATTAAATTTGCCTTCAACTATAGGCTTAAGCTTTTGGGTGAATTCGTGGTTTAATATGGTATCAGAGCAGGTGGTCCAAGGAGGTCCTAGTGTTCAACCCCTTGCATTGTCGTTTCCTCCCCAAGTAAAATCGATTTCCACTTGTTGGCCTTTCAAATATTTCAAGCCCACAAGTGAGGGGAATGTTGGTGATATATAAATAAATTTGTCTTCCAACACAAGCTTAAGCTTTTGGGTCAATTGGTGGTTTAATAATAAAAATACAATTTCTCACAAAATTCTTGATCACATATGATCAATCAAACTTATAGCAACAGAAAACACAAACAACTCTAAACAGAAATGCAACAAAGAAAAAATCACAAAGAACTAAGATCCAACATTAGGGACCTGGATCCTTCTTCCTCTCTTGGTGCGGAGGAATGCAGCCTCTGCTTCTCCAGAAAATATCTTCAATGCTCTCCCCCTTCTCATTCCTTTTCTTTTATTCTAACTAACTACTGGTCCCCAACTTCCTTTCTCTCTCCCAAACTCCCACGTGTGACTCTACTTTTATCTTTATTTCTTCTACTATATTTAAAAAGTATAGAAGGTCTAGCAATATGTCAGGCTCCCAAACACAAATAACTAGTGAAAGACCCAACAATGGCTAAACAGAGTCGGTACTCTGCTATCTTTTATTTATATATAAGCCAAAATATCACAAGCAACAAGATAAACGATAACGAAATAAAGAAATACCCAGAAAAACATACCAGCTCTCTTTACAAGAAGGATACTACCCCCTTGCGGCTACAGCAGCCTGCCCTCTAAAGAAGATTAAAAAATAAAACCTATCCAGCCTATTACAATATTTCCTATTTATAGTTCTCCTAAAATTACACACAGTGGGGCCCATTCAGCACGTTCTCTTTCCCCATCATTCTTTCTTATTATTAGTTGGTGAATTTTCATTTCTGCCCCTCCTCACATATGTATGTATAATTGGTGGCCTAACAATACCCCTCGGTTTCAGATTCACCTTGTCCTCAAGGTGGAATGTGAGGAATTGATGATTCATCTGGTATACAGCTTCCCAGGTAGCTTCTGATTCAGGTAGATTCTTCCATTTGACTAACCATTCATTCGCTTCCAGCTCCTTATTCCAACGGATTCCCCACACCGTCTCAGGCCATAACTGTAGCTCAAAGTCTTCTGTCAATATAGGATCTTGTTGCTGGACCACTTGTTGATTTCCCAGCTTGAGTTTTAGTTGGGAGATGTGAAAAACATTGTGAATAATTGCTTCCGGGGGGAGTTGAAGTCTGTATGCTACTTCTCCTATTTCTTCAATGATTGGATATGGTCCATAAAATCTGGGGGCCAGTTTTTCACATCTTTTGCGAGCTAACGAGCGTTGCCTATAAGGACGGAGTTTCAAGTATACTTCATCTCCTATTCTGAATTTCAGTTCCCTTGTTTTTGTGTCTGCCATTTTCTTCATACGATTCTGCGCCCCAGTCAAATTCTCCTTCAGAGCATTCAAGGCTAAGTCCCTTTCTTTTAATATTAACTCTACTTCATTGTTCGGAGTTTTTCTATTCCCATAAGAAATTAAGGGAGGGGGTTGTCTTCCATACACCGTTTGGAAAGGGGTGGATCTTGTGGAGGAGTGGAATGTTGTGTTATACCACAACTCAGCCCATGGAATAAACTTATCCCACTTGTGCGGTTGTTCGTTACAAAAGCATCTTAGATAAGTCTCCACACACTGATTGACTCTTTCGGTCTGTCCATCGGTTTGGGGTGAAAAGCGGTACTTCTTTTCAATTTAGTTCCCATGGATGCAAACAATTCTTTCCAGAAATGACTAATGAAGATTTTATCCTTGTCGGATATTAATGATTTAGGTATTCCATGTTGGCTGACCACTCTTTCAACAAACACTTTGGCTACTTGTTTAGCTGTGAATGGGTGTTTCATGGTAACGAAGTGAGCATACTTGCTTAATCTGTCTACAATTACCATGATTACGTTCATTCCTCCCGCTTTTGGCAATCCTTCTATGAAATCCATGGACCATTCCTCCAATATGGCTTCTGGAAAGGGTATTGGTTGAAGTACCCCTGCTGGTTTTGTGGCTTCATATTTGTTCCTTTGACAGACCTCACATTGCTCGACGTATTTCTTGATGTCTGTTTTCATTCCTTTCCAATACAGCTCTCCGCTCATTCTTTTGTAGGTTCTTAGGAACCCTGAATGCCCTCCTAGAATGTTTGAATTCTTCAAAGATTCTGGGCAGAAAAGTTTAGTAGCATGTTTGATCAGAATCCAACAAGATGGTTCTTATAGTGACTGTGAAAAAAATTTGTCACCTACTCGACACCTTTACCCCACATGGAGGAGATTGTATTAAGAGACGCCTTTCTGACCGGGTTGGAACCAAATCTTCAAGCGGAAGTGGTCAGTAGATATCCACAGACGTTGGAAGATTGCATGAGAGAGGCTCAATTGGTTAATGATCATAACCTGGCGTTGACAATGACAAAGGCATAAGAGAAAATGATAGAATACAAGAGAGGATAAGGGTCTGTGGGCAAAGCTCAAGTGGGGATGGAGAAGGGGGTAGTAAGGAAGACTGACTTCCAATGAAGCAAGTGACGATACCCATCAAAGGTAATTACCAAAGGAGTGAACCACCCGTTAAACGCCTTTCAGATGCTGAGTTTAGATCCAGACTTGACAAAGGGCTATGTTTCAAATGTAATGAGAAGTATTCCCCGGGGCATAGATGTAGAATGAAGGAAAAAAGGGAACTGATGTTATTCATCATGAATGAAGAAGAAGGGAACGAAGAGGAGAACGTGATAAAGGAAAACGCAGAGGCAGTGTTGGAGTTAAACAACCTGAATCTTAACGAGGAGAAGGAGATTGATTTAAACACCATTACTGGGCTGACCTCAAAGGGTACTATGAAACTAAGGGGTGAAATAAAAGGAAGAGAAGTAGTAGTGCTGATTGATAGTGGAGCCACCCACAACTTTGTGCACTATAAGATCATAGAAGAAATAGAGATATCGATAGAGGCAGACACCACCTTTGCAGTAACAATTGGGGACGGAACTTGTTGTAAAGGGAGAGGATTATGTAAGAGGCTGGAAGTGAAACTACAGGGGATCACAGTAGTGGCAGATTTTTTTATAATCGAGTTGGGAAATGTAGATGCAATCCTAGGAATGCAGTGGTTAGACACCACAGGCACTATGAAAATACATTGGCCGTCACTGACCATGTCCTTTTGGGTCGGAAGAAAACAAATTGAACTAAAAGGGGACCCTTCCCTCATCCGAGCAGAATGCTCCTTGAAGACGATTGAAAAAACCTAGGAGGAGGAAGATCAAGGGTTTTTATTATCACTACTCAACTATGAGATAGAAGAGAATGAAGAGGGAATGGAGGAACAGACCAAAAAAGGGGATGAAGAAGACATTCCCATGATCAGAACACTGTTACAATAGTATACAGATCTATTTGAAGATCCAAAGGGGTTGCCACCCAAGAAAGCGGAATAGACCACCGCATCATGGTAATGCCGAATCAACAACCAATTAATATACGACCATATAAATATGGGCACGTGCAAAAAGAAGAGATTGAGATGGTGGTGGAGATCTACAAGCAGGAGTGATCAGGCCCAGTCGTAGCCCTTATTCCACTCCAGTCTTGTTAGTTAAGAAAAAGGATGGGGGATGATGTTTTTGCGTGGACTACAGAAAGCTAAATCAGGTCACCACTTCAGATAAATTCCCCATTCTGGTAATAGAGGAGTTGTTGGATGAATAACATGGAGCCATGGTATTCTCGAAGTTGGATCTGAAATCTGGTTATCACCAAATACGTATGAAGGAGGAAGACATTGAAAAAACGGCGTTTAGAACACACGAGGGACACTATGAATTTGTTGTGATGCCTTTCAGACTCACAAATGTGCCAGCCACCTTTCAATCCTTGATGAACCAGGTATTCAAACCCTTCTTAAGACGTTGTGTATTGGTTTTTTTTTACGATATTCTAGTGTATAGCACTGATTTGTTGGAACATGAGAAACATCTGGGCATGGTATTTGCTGTCATGAGGGATAATCAATTGTTCGCGAATAAGAAAAAGTGCGTAATAGCACACTCCCAAATCCAATACTTAGGACACATGATCTCCAGTAAAGGTGTAGAAGCGGATGAAGAGAAAATCAAGGATATGACAAACTGGCCTCAACCCAAGGATGTTATCGGATTGCGAGGATTCTTAGGTTTGACAGGCTACTATAGGAGATTTGTCAAGGGATATGGAGACATTGCTGCCCCATTAACTAAACTCTTACGGAAGAACTTCTTCTGGAATGAAGATGCCTTTGTAGCTTTTGAAAAATTGAAGATAGCCGTGACTACCATCCCAGTTCTAGCGTTGCCTAACTGGAATTTACTGTTTATTATTGAAACAGACGCCTCGGGCATAGGGTTGGGCGCGGTACTGTCTCAAAATGGTCATCCCATAGCCTTCTTTAGTAAAAATTTATCCATCCGAGCACAATCCAAATCGGTTTATGAAAGAGAACTCATGACTGTTGTATTGTCGGTGCAGAAATGGAGGCACTACCTCCTTAGGAGGAAATTTACAATTATATCAGATCAGAAAGCACTCAAGTTTCTGCTGGAACAGAGGGAGGTACAACCGCAGTTCCAAAAGTGGTTAACCAAACTACTTGGACGATTTCGAGATACTATATCAATCGGGGCTACAAAACAAGGTAGCAGATGCACTCTCTAGAATCGAACAGCCACTGGAAATGAATTCGATGTCCACAGTAGGAATTGTGAATATGGAAATAGTGAATTGGGAAGTGTTGTAGGATACAGAACTCTAAAGAATCAGGGAGGAGTTACAACATGGTTCCGAGGAAGGGAGTAAATACAGTTTGTAGAATGGGAAACTTCTTTACAAGAACAGAGTTGTGCTTTCCAGAACTTCTTCATTGATACCGACGTTGATGCATACATTCCATGATTCCATTCTAGGAGGACATTCAGGGTTCCTAAGGACCTATAAAAGAATGAGCGGAGAACTGTATTGGAAAGGAATGAAAACAGACATCAAGAAATACGTCGAGCAATGTGAGGTCTGTCAAAGGAACAAATAGAGGCTTTCTTCGCATTGTTAAATTTAAATTGCCGGTTCCCTCCAAAAGCACTACTCAGCCCACATTCTCTTCGAACTATCTCTCTGTTTTCAATCTTCAGGGCCAGTTTCATCATCTGGGCCAAACCAACGGGCTCCAGAGTCAACTTCTGCTTTCAGCCATGGGCTCAGCCCATTCATGAACGTTTCTTCCAATACTACAGTTTGAAGGAAGGCTACCGATGCTAAATACTTATTGAATCGGTTTCGATACTCCTTCACTGTCATCTCCTGCTTGATCGTTAAGAATCGGCCTACGAGTGTTCCATCCCGAATTGTTCGAAATTGGATTAGCAATCTCTGTTTCAAGTTCTCCCAATTCTTAAACCGTTCTAATTTGTCATTCAATTGATACCAATCCAGAGCAGGTTCATCAAAGCTAATTACCGCCCCTGTTAATTTCTCAGAATCAATAGGCTTATGTATCTTAAAATAACGTTCTGCTTGGAATAGCCAGGAATCAGAATAAGTCCTGTTGAAGACTGGCATTTCCACCTTCTTAAACTTACTTCGATCCGCCGGTTTCTCATCATCGTTCTTTCCATCCTTCTTCGATCCCTCAGATGTTTTTGATATGATTGTTTTGGTGCCTTTCGTTTAGCTAACAACACTCTCCGTTTTCTTTCCTGCCGATATATCATTGCAAACTATGCCTTCAATATACTTCATGATCAATTGCTGTTGTTGTTACTGTTTATTGATCAGAATATTAATCTCCTTAATACTTTTCGATATCAATGACAAGTTTTATTCTATTATCGGCAATCTCAGGAGTTCTTGTTCTACCGTTTCCATTCTTTCTTCCACTTTCTTAGTCATGCTCACTCTTCTGCCCAGGTTTCAAGTTCCGATACCAATTTGTAAAGATACCACAATGTATCTTATATTATTGAATTTCCTCAACAGATTACAATATAGAAATACGATTTCTCACATAATTCTTGATCACAGATGATCAATCAAACTTATAGCAATAGAAAACACAAACAACTCTAAACAGAAATGCAACAGAGAACAAATCACAAAGAACTAAGATCGAACAATAGAACTTGGACCCTTCTGCCTTTCTTCCTGTGCAAGGAGGAATGCAGCCTCTGCTTCTTCAGAAAATATCTTCGATGCTCTCCCCCCTCTCATTCCTCTTCTTTGATTCTAACGAACTACTGGTCCCCAACTTCCTTTCTCTCTCCCAAACTCCCACTTGTGACTCTATTTTTATCTTTATTTCTTCTGCTATATTTAAAAAGTGTAGGAGGTCTAGCAGGATTTAAGGTGGCCTAGGTTCATGTCTCAATCTATCATTTTTCTGTACTTGAACCTGAATAATCCATCCCTACCACGCCTTGATGAAAGATCAGAATCAGTTATTGATCTGCTAATGTGAAAATGAGCAATCTTATATGTTCTTAGAGTCCCATTGTCTGTAGCTCCGAATTGATCTTCAAAAACGTGCTATGCAAATATACTGCCCTTTTCTTATGTTAATGTTTATTAAAGCTTGACTCCGTTCCAGGTTGGCAACTATCCTGAACGGGACCCTTTTGACGATGAAGATGATGAGATATGAACAGTTCATACTCAGATTGGTATTTGTAGCATTTATGGATCTAGCCAACCTACTTTCTGAAGCCTTGATGAATTATTGATTTCTTTTGGAAGTAATAAAGACAGAGCTTCAGATGGCTTTTGCTCATGGTGGTTTGATATGGTTTCACGAGCTTTACTTAAAGGAAGCTATTTTCTTGCTGGGAATTTCTTGAAAGAAAACATAAACAATGATGACGTTCAGATCTTCGGTGATTGTTGTATTGAAAACTGTTTTTGGTAGGGTGTTATGAATTGCATTGTTAATTGAAAAAAAAGAAATAGATATCGCATTGGAGTGAAGATTTTGCATTGTATTTCTATTAGTAAAGTCTTTTTAGTTGTTTTGACTTTTGTATTGCAATGCAAGTCTCGTACGAACTCTTAATACACATAAAGGTTTCCCTTCATGTGTATGTTTCTCTTTCCTTTAATGCCCACATATTTCAATCATTTACGATATTGTAATGTAGCGTTTATAATTTGCATAGAAAGATGTGTCAATGTAATATCTGTTGAATCAACTCAAAACAATTAGTTTTACATAACTTAATTGGTAGTGTATTTGAAT

mRNA sequence

ATGGCGTCTCGATTGCAGCAGATCGAAAAGGATGAATCTGTGCTCTTGCGTGTCACCCATGCCAATCTCAAGTCCTTCACATCTGATGTTCGTTTTTCCCTTCAGATGAGCGTGGAGTCTGTCAAGGAAAAATTGTGGAGAAAATGTGGTACTTCTGTGAACTCTATGTGCCTCGAACTCTACGATGATTCCGGTTCTAAAATTTCCGATTTGACGGATAATTGCATTCCCTTGGGCTTCTATTCTCCCTTAGATGGGTACCGGCTGCATATTATTGATCTTGACCCCTCATCAGTTACTTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTTCCAGATCTCTGAAGAAGCCTATGATAAACGTGATGACACATTTAGAAAATTTAAAGAAAAATTGGCATCCCAGAATCCTTCAGCATTTGAGAGTAAAATATCTGATAACTACATGGAAGAGCTCTGTGCAAATATTAAGGTTGGTGATAGATGTCAAGTTGAACCCGGGGAGAAACGGGGTGTTGTGAAATTTGTTGGCCGGGCTGAATCGCTTGCTCCTGGTTTTTGGGTTGGAGTTCAATATGATGAACCATTGGGAAAAAATGATGGCACGGTAAAAGGGATCCACTATTTTGACTGCTCTCCTTTTCATGGTGCGATGGTTAGGCCTGACAAAGTGAAGGTTGGCAACTATCCTGAACGGGACCCTTTTGACGATGAAGATGATGAGATATGA

Coding sequence (CDS)

ATGGCGTCTCGATTGCAGCAGATCGAAAAGGATGAATCTGTGCTCTTGCGTGTCACCCATGCCAATCTCAAGTCCTTCACATCTGATGTTCGTTTTTCCCTTCAGATGAGCGTGGAGTCTGTCAAGGAAAAATTGTGGAGAAAATGTGGTACTTCTGTGAACTCTATGTGCCTCGAACTCTACGATGATTCCGGTTCTAAAATTTCCGATTTGACGGATAATTGCATTCCCTTGGGCTTCTATTCTCCCTTAGATGGGTACCGGCTGCATATTATTGATCTTGACCCCTCATCAGTTACTTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTTCCAGATCTCTGAAGAAGCCTATGATAAACGTGATGACACATTTAGAAAATTTAAAGAAAAATTGGCATCCCAGAATCCTTCAGCATTTGAGAGTAAAATATCTGATAACTACATGGAAGAGCTCTGTGCAAATATTAAGGTTGGTGATAGATGTCAAGTTGAACCCGGGGAGAAACGGGGTGTTGTGAAATTTGTTGGCCGGGCTGAATCGCTTGCTCCTGGTTTTTGGGTTGGAGTTCAATATGATGAACCATTGGGAAAAAATGATGGCACGGTAAAAGGGATCCACTATTTTGACTGCTCTCCTTTTCATGGTGCGATGGTTAGGCCTGACAAAGTGAAGGTTGGCAACTATCCTGAACGGGACCCTTTTGACGATGAAGATGATGAGATATGA

Protein sequence

MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELYDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAYDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVGRAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDDEDDEI*
Homology
[Close]
BLAST of CsaV3_4G027840 vs. NCBI nr
Match: XP_004142648.1 (tubulin-folding cofactor B [Cucumis sativus] >KAE8649611.1 hypothetical protein Csa_012598 [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 8.2e-139
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA
Sbjct: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240

Query: 241 EDDEI 246
           EDDEI
Sbjct: 241 EDDEI 245

[Close]
BLAST of CsaV3_4G027840 vs. NCBI nr
Match: XP_008455691.1 (PREDICTED: tubulin-folding cofactor B isoform X2 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 1.7e-136
Identity = 242/245 (98.78%), Postives = 243/245 (99.18%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSGSKISDLTDN IPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA
Sbjct: 61  YDDSGSKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSP HGAMVRPDKVKVGNYPERDPFDD
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPLHGAMVRPDKVKVGNYPERDPFDD 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 245

[Close]
BLAST of CsaV3_4G027840 vs. NCBI nr
Match: XP_022153874.1 (tubulin-folding cofactor B [Momordica charantia])

HSP 1 Score: 475.3 bits (1222), Expect = 3.1e-130
Identity = 229/245 (93.47%), Postives = 238/245 (97.14%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MASRLQ+IE DESVLLRVTHANLKSFTSDVRFSLQMS+ESVKEKLW+KCGTSVNSMCLEL
Sbjct: 1   MASRLQEIEADESVLLRVTHANLKSFTSDVRFSLQMSIESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSG+KISDLTDN +PLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEK+QISEEA
Sbjct: 61  YDDSGAKISDLTDNSLPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           YDKRDDTFRKFKEKLASQNPSAFESKISD YMEELCANIKVGDRC+VEPGEKRGVVKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDTYMEELCANIKVGDRCEVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESLAPGFWVGVQYDEPLGKNDG VKGI YFDC P HGAMVRPDKVKVG+YPERDPFDD
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGMVKGIRYFDCPPLHGAMVRPDKVKVGDYPERDPFDD 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 245

[Close]
BLAST of CsaV3_4G027840 vs. NCBI nr
Match: XP_038889058.1 (tubulin-folding cofactor B [Benincasa hispida])

HSP 1 Score: 473.8 bits (1218), Expect = 9.1e-130
Identity = 229/245 (93.47%), Postives = 239/245 (97.55%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MAS+LQQIEKDESVLL+VTHANLKSFTSDVRFSLQMSVESVKEKLW+KCGTSVNSMCLEL
Sbjct: 1   MASQLQQIEKDESVLLQVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YD+SGSKISDLTDN IPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA
Sbjct: 61  YDESGSKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEE+CAN+KVGDRC+VEPGEKRGVVKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEEICANMKVGDRCEVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESLAPGFWVGVQYDEPLGKNDG VKGI YFDC   HGAM+RPDKVKVG+YPERDPFDD
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGMVKGIRYFDCPLLHGAMIRPDKVKVGDYPERDPFDD 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 245

[Close]
BLAST of CsaV3_4G027840 vs. NCBI nr
Match: KAG6595702.1 (Tubulin-folding cofactor B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-128
Identity = 228/245 (93.06%), Postives = 236/245 (96.33%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MASRLQQIE DESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLW+KCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSG+KISDLTDN IPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEK+QISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           Y+KRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRC+VEPG+ RG VKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESLAPGFWVGVQYDEPLGKNDG VKGI YFDC P HGAMVRPDKVKVG+YPE DPFDD
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVKVGDYPELDPFDD 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 245

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy Swiss-Prot
Match: Q67Z52 (Tubulin-folding cofactor B OS=Arabidopsis thaliana OX=3702 GN=TFCB PE=1 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.8e-104
Identity = 182/245 (74.29%), Postives = 211/245 (86.12%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MA+   Q+E D+SV L +THANLKSF++D RFS QMSVE+VKEKLW+KCGTSVNSM LEL
Sbjct: 1   MATSRLQLEGDDSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSGSK++ L+D+  PLGF+SP DG+RLHIIDLDPSSVT+GGWLEDTSLVEK+ ISEE 
Sbjct: 61  YDDSGSKVAVLSDDSRPLGFFSPFDGFRLHIIDLDPSSVTTGGWLEDTSLVEKYNISEED 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           Y KR D+FRKFKEK  SQNP A E+K  +NYME+LCANIKVGDRCQVEPGEKRG+VK+VG
Sbjct: 121 YAKRTDSFRKFKEKRVSQNPVAAEAKTKENYMEDLCANIKVGDRCQVEPGEKRGMVKYVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESL PG+WVG+QYDEPLGK+DG VKG  +F+C    G MVRPDKVKVG+YPERDPF  
Sbjct: 181 RAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECPRLQGGMVRPDKVKVGDYPERDPF-- 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 243

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy Swiss-Prot
Match: Q20728 (Tubulin-specific chaperone B OS=Caenorhabditis elegans OX=6239 GN=tbcb-1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.5e-39
Identity = 91/218 (41.74%), Postives = 128/218 (58.72%), Query Frame = 0 

Query: 22  NLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELYDDSGSKISDLTDNCIPLGFY 81
           N   F  + ++   MS+  +K+KL    GT+V+SM ++L+D       +LTD    L   
Sbjct: 12  NATDFPMEKKYPAGMSLNDLKKKLELVVGTTVDSMRIQLFDGDDQLKGELTDGAKSLKDL 71

Query: 82  SPLDGYRLHIIDLDPSSVTSGGW-LEDTSLVEKFQISEEAYDKRDDTFRKFKEKLASQNP 141
              DGYR+H +D     VT G    +D S+VEK+++S++ Y KR D+ R +K+K+  +  
Sbjct: 72  GVRDGYRIHAVD-----VTGGNEDFKDESMVEKYEMSDDTYGKRTDSVRAWKKKMQEEQG 131

Query: 142 SAFE-SKISDNYMEELCANIKVGDRCQVEPG---EKRGVVKFVGRAESLAPGFWVGVQYD 201
           SA      SD   EE   NI VG+RC+V  G    +RG V +VG A     G WVGV+YD
Sbjct: 132 SAAPMENESDKLNEEAAKNIMVGNRCEVTVGAQMARRGEVAYVG-ATKFKEGVWVGVKYD 191

Query: 202 EPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPE 235
           EP+GKNDG+V G+ YFDC P +G  VRP  VKVG++PE
Sbjct: 192 EPVGKNDGSVAGVRYFDCDPKYGGFVRPVDVKVGDFPE 223

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy Swiss-Prot
Match: Q5E951 (Tubulin-folding cofactor B OS=Bos taurus OX=9913 GN=TBCB PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.2e-35
Identity = 91/231 (39.39%), Postives = 129/231 (55.84%), Query Frame = 0 

Query: 21  ANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELYDDSGSKISDLTDNCIPLGF 80
           ++L SF S  R+S  ++V   K KL    G+  + M LELY         L  +   LG 
Sbjct: 17  SSLNSFRSQKRYSRSLTVAEFKCKLQLVVGSPASCMELELYGPDDKFCCKLDQDDALLGS 76

Query: 81  YSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAYDKRDDTFRKF--KEKLASQ 140
           Y   DG R+H+ID   + +   G  ED S VEK++IS+EAY++R D+ R F  + KL   
Sbjct: 77  YPVDDGCRIHVIDHSGARL---GEYEDISKVEKYEISQEAYEQRQDSIRSFLKRNKLGRF 136

Query: 141 NPSAFESKISDNYM-----EELCANIKVGDRCQVE-PGE--KRGVVKFVGRAESLAPGFW 200
           N      + ++N       E   + I VG RC+V  PG+  +RG V +VG  +   PG+W
Sbjct: 137 NEEERAQQEAENSQRLIEEEAQASTIPVGSRCEVRTPGQPPRRGTVMYVGLTD-FKPGYW 196

Query: 201 VGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDDE 242
           +G++YDEPLGKNDG+V G  YF+C   +GA V+P  V VG++PE D   DE
Sbjct: 197 IGIRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSVVTVGDFPEEDYGLDE 243

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy Swiss-Prot
Match: Q9D1E6 (Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 8.8e-35
Identity = 92/233 (39.48%), Postives = 130/233 (55.79%), Query Frame = 0 

Query: 21  ANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELYDDSGSKISDLTDNCIPLGF 80
           ++L SF S+ R+S  +++   K KL    G+  + M LELY       S L      LG 
Sbjct: 17  SSLNSFRSEKRYSRSLTIAEFKCKLELVVGSPASCMELELYGADDKFYSKLDQEDALLGS 76

Query: 81  YSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAYDKRDDTFRKF--------- 140
           Y   DG R+H+I  D S V  G + ED S VEK++IS EAY++R +T R F         
Sbjct: 77  YPVDDGCRIHVI--DHSGVRLGEY-EDVSKVEKYEISPEAYERRQNTVRSFMKRSKLGPY 136

Query: 141 KEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGE---KRGVVKFVGRAESLAPG 200
            E+L +Q  +    ++S+   +   + I VG RC+V   +   +RG V +VG  +   PG
Sbjct: 137 NEELRAQQEAEAAQRLSEEKAQ--ASAISVGSRCEVRAPDHSLRRGTVMYVGLTD-FKPG 196

Query: 201 FWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDDE 242
           +WVGV+YDEPLGKNDG+V G  YF+C   +GA V+P  V VG++PE D   DE
Sbjct: 197 YWVGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSAVTVGDFPEEDYGLDE 243

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy Swiss-Prot
Match: Q99426 (Tubulin-folding cofactor B OS=Homo sapiens OX=9606 GN=TBCB PE=1 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-34
Identity = 92/231 (39.83%), Postives = 129/231 (55.84%), Query Frame = 0 

Query: 21  ANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELYDDSGSKISDLTDNCIPLGF 80
           ++L +F S+ R+S  +++   K KL    G+  + M LELY       S L      LG 
Sbjct: 17  SSLNTFRSEKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSKLDQEDALLGS 76

Query: 81  YSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAYDKRDDTFRKF--KEKLASQ 140
           Y   DG R+H+ID   + +   G  ED S VEK+ IS+EAYD+R DT R F  + KL   
Sbjct: 77  YPVDDGCRIHVIDHSGARL---GEYEDVSRVEKYTISQEAYDQRQDTVRSFLKRSKLGRY 136

Query: 141 NP---SAFESKISDNYMEE--LCANIKVGDRCQVE---PGEKRGVVKFVGRAESLAPGFW 200
           N    +  E++ +    EE    ++I VG RC+V       +RG V +VG  +   PG+W
Sbjct: 137 NEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTD-FKPGYW 196

Query: 201 VGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDDE 242
           +GV+YDEPLGKNDG+V G  YF+C   +GA V+P  V VG++PE D   DE
Sbjct: 197 IGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPAVVTVGDFPEEDYGLDE 243

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy TrEMBL
Match: A0A1S3C1L1 (tubulin-folding cofactor B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495804 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.3e-137
Identity = 242/245 (98.78%), Postives = 243/245 (99.18%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSGSKISDLTDN IPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA
Sbjct: 61  YDDSGSKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSP HGAMVRPDKVKVGNYPERDPFDD
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPLHGAMVRPDKVKVGNYPERDPFDD 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 245

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy TrEMBL
Match: A0A6J1DKD2 (tubulin-folding cofactor B OS=Momordica charantia OX=3673 GN=LOC111021286 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-130
Identity = 229/245 (93.47%), Postives = 238/245 (97.14%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MASRLQ+IE DESVLLRVTHANLKSFTSDVRFSLQMS+ESVKEKLW+KCGTSVNSMCLEL
Sbjct: 1   MASRLQEIEADESVLLRVTHANLKSFTSDVRFSLQMSIESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSG+KISDLTDN +PLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEK+QISEEA
Sbjct: 61  YDDSGAKISDLTDNSLPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           YDKRDDTFRKFKEKLASQNPSAFESKISD YMEELCANIKVGDRC+VEPGEKRGVVKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDTYMEELCANIKVGDRCEVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESLAPGFWVGVQYDEPLGKNDG VKGI YFDC P HGAMVRPDKVKVG+YPERDPFDD
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGMVKGIRYFDCPPLHGAMVRPDKVKVGDYPERDPFDD 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 245

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy TrEMBL
Match: A0A0A0L346 (CAP-Gly domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G354120 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 8.3e-129
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA
Sbjct: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKV 230
           RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKV
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKV 229

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy TrEMBL
Match: A0A6J1HTU0 (tubulin-folding cofactor B OS=Cucurbita maxima OX=3661 GN=LOC111466096 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 227/245 (92.65%), Postives = 235/245 (95.92%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MASRLQQIE DESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLW+KCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSG+KISDLTDN IPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEK+QISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           Y+KRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRC+VEPG+ RG VKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKIRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
            AESLAPGFWVGVQYDEPLGKNDG VKGI YFDC P HGAMVRPDKVKVG+YPE DPFDD
Sbjct: 181 WAESLAPGFWVGVQYDEPLGKNDGMVKGIRYFDCPPLHGAMVRPDKVKVGDYPELDPFDD 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 245

[Close]
BLAST of CsaV3_4G027840 vs. ExPASy TrEMBL
Match: A0A6J1EBG6 (tubulin-folding cofactor B OS=Cucurbita moschata OX=3662 GN=LOC111432491 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.1e-127
Identity = 227/245 (92.65%), Postives = 235/245 (95.92%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MASRLQQIE DESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLW+KCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSG+KISDLTDN IPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEK+QISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           Y+KRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRC+VEPG+ RG VKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKIRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESLAPGFWVGVQYDEPLGKNDG VKGI YFD  P HGAMVRPDKVKVG+YPE DPFDD
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDSPPLHGAMVRPDKVKVGDYPELDPFDD 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 245

[Close]
BLAST of CsaV3_4G027840 vs. TAIR 10
Match: AT3G10220.1 (tubulin folding cofactor B )

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-105
Identity = 182/245 (74.29%), Postives = 211/245 (86.12%), Query Frame = 0 

Query: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60
           MA+   Q+E D+SV L +THANLKSF++D RFS QMSVE+VKEKLW+KCGTSVNSM LEL
Sbjct: 1   MATSRLQLEGDDSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALEL 60

Query: 61  YDDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120
           YDDSGSK++ L+D+  PLGF+SP DG+RLHIIDLDPSSVT+GGWLEDTSLVEK+ ISEE 
Sbjct: 61  YDDSGSKVAVLSDDSRPLGFFSPFDGFRLHIIDLDPSSVTTGGWLEDTSLVEKYNISEED 120

Query: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180
           Y KR D+FRKFKEK  SQNP A E+K  +NYME+LCANIKVGDRCQVEPGEKRG+VK+VG
Sbjct: 121 YAKRTDSFRKFKEKRVSQNPVAAEAKTKENYMEDLCANIKVGDRCQVEPGEKRGMVKYVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDD 240
           RAESL PG+WVG+QYDEPLGK+DG VKG  +F+C    G MVRPDKVKVG+YPERDPF  
Sbjct: 181 RAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECPRLQGGMVRPDKVKVGDYPERDPF-- 240

Query: 241 EDDEI 246
           E+DEI
Sbjct: 241 EEDEI 243

The following BLAST results are available for this feature:
BLAST of CsaV3_4G027840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142648.18.2e-139100.00tubulin-folding cofactor B [Cucumis sativus] >KAE8649611.1 hypothetical protein ... [more]
XP_008455691.11.7e-13698.78PREDICTED: tubulin-folding cofactor B isoform X2 [Cucumis melo][more]
XP_022153874.13.1e-13093.47tubulin-folding cofactor B [Momordica charantia][more]
XP_038889058.19.1e-13093.47tubulin-folding cofactor B [Benincasa hispida][more]
KAG6595702.11.7e-12893.06Tubulin-folding cofactor B, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CsaV3_4G027840 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q67Z521.8e-10474.29Tubulin-folding cofactor B OS=Arabidopsis thaliana OX=3702 GN=TFCB PE=1 SV=1[more]
Q207284.5e-3941.74Tubulin-specific chaperone B OS=Caenorhabditis elegans OX=6239 GN=tbcb-1 PE=1 SV... [more]
Q5E9515.2e-3539.39Tubulin-folding cofactor B OS=Bos taurus OX=9913 GN=TBCB PE=2 SV=1[more]
Q9D1E68.8e-3539.48Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2[more]
Q994261.2e-3439.83Tubulin-folding cofactor B OS=Homo sapiens OX=9606 GN=TBCB PE=1 SV=2[more]
BLAST of CsaV3_4G027840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C1L18.3e-13798.78tubulin-folding cofactor B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495804 PE... [more]
A0A6J1DKD21.5e-13093.47tubulin-folding cofactor B OS=Momordica charantia OX=3673 GN=LOC111021286 PE=4 S... [more]
A0A0A0L3468.3e-129100.00CAP-Gly domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G354120 PE=... [more]
A0A6J1HTU01.2e-12792.65tubulin-folding cofactor B OS=Cucurbita maxima OX=3661 GN=LOC111466096 PE=4 SV=1[more]
A0A6J1EBG62.1e-12792.65tubulin-folding cofactor B OS=Cucurbita moschata OX=3662 GN=LOC111432491 PE=4 SV... [more]
BLAST of CsaV3_4G027840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G10220.11.3e-10574.29tubulin folding cofactor B [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000938CAP Gly-rich domainSMARTSM01052CAP_GLY_2coord: 161..228
e-value: 2.0E-29
score: 113.7
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 161..227
e-value: 1.2E-22
score: 79.6
IPR000938CAP Gly-rich domainPROSITEPS00845CAP_GLY_1coord: 180..212
IPR000938CAP Gly-rich domainPROSITEPS50245CAP_GLY_2coord: 181..223
score: 17.04879
IPR000626Ubiquitin-like domainPFAMPF14560Ubiquitin_2coord: 14..98
e-value: 3.3E-26
score: 91.6
IPR036859CAP Gly-rich domain superfamilyGENE3D2.30.30.190coord: 155..236
e-value: 8.1E-29
score: 101.2
IPR036859CAP Gly-rich domain superfamilySUPERFAMILY74924Cap-Gly domaincoord: 103..230
NoneNo IPR availableGENE3D3.10.20.90coord: 13..97
e-value: 5.4E-29
score: 102.4
NoneNo IPR availablePANTHERPTHR18916:SF76TUBULIN FOLDING COFACTOR Bcoord: 13..237
NoneNo IPR availablePANTHERPTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGcoord: 13..237
NoneNo IPR availableCDDcd01789Ubl_TBCBcoord: 14..93
e-value: 1.74511E-30
score: 106.5
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 11..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G027840.1CsaV3_4G027840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding