CsaV3_4G027570 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G027570
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 16795055 .. 16801409 (-)
RNA-Seq ExpressionCsaV3_4G027570
SyntenyCsaV3_4G027570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCGCCTCCACCCTCATTTTCTTTTACTCTCTTTCTTCCTTCTGTCGTCTTTCCTTTCTCTCCTTCTCTGTCTTTTTCTTTTCTCTTCACTTCTTTCTTTTCTTTTCTCTCATATTTTCTTTTTCCTTTCTCTTCTCCTCTTTCCTTCTCTCTTTTCTTTTTCTATACCTCTCTATCTCCCTATACGGCAAGTTCTTAAAAGAAAAAAGGGAGACCGGCGGAGATGTTATAGTACGGCGGCGCGGAGACGACCAACAAGTAATCAAGATCTACGTTTTTGCGACAAGCAGCTTTGGTAACGATGGTCTCTTCGTTTTTTTATTGTTCGTTCTTATTACCTAAGATCTACGTGGTTTCTATTTGGGTTTTCCACTTTGTTTTTGTTTTGAAATCAAGAGTTGGAATGTGTTCAGCACTCTGGCCATCAAGTTTAAGGACCTTGGCCCCGCATTCATGTCAGTTTGGAACCTATTCAAACACGAACCAACAAGTAATTAAGCTTTTCTGGCCTTAATCAGCGGGCAATGATTTGTTTTCATGACTTTCAAACTCGTTTAAGTTCGGTTAGTTAGTCTCTAACCTTTGAAGTTCTTCCATTTCAGTTTTGAGCTAATACGTCAGCGAGAATGAGTTAATAAACCTCCTCAGTATCCTTTGGGTAAGGTAATAGCATTTACATTGAGTTTCAGAGTAATTTTGGTTTAAGTTCTTATTTATAAAATTTGATCCAAATTTTTGGATTGAATTGAAGTACCGAATCAGTTTCTAACCAATGGAGCCTTTATGCGTTTAGGTTGAACTGATTAGATCCATCTGAGTAACTTTTAGTTGTATAGTTAATTTTTGGATTGAATTGAAGTATTACCAAATCAGTTCCTAACCAATGGAGCCTATATGCGTTTAGGTTGAACTGATTAGATTGTTGATTTATGAGATGACAACTGGTAAGAGCTAGTTACTACTAGCTCTTGAATTACGTTTTAGAATTAGTAAGATTAAGTTTTGATTTCAGAAATTTTCTTTAGGTTGATTTGAGGAGATTTGATCGAGAGAAATTTTTATACTTTGGATTTCTAATCAGGTAAGTGGCTCTTGTGATGTATGACCTTAGGGCGAGTCATATATATGTTAACAATTATGTATTGATTATCCTTGAATTATGATGATTGAAATGTATGGTGAATGATGATGTATGTTGATTGACAATGTTTGCTGATTATGATGTGAATGCATGTATTGATAACACATATATGTGCATGGGACCCCATGCATGGATGTGATGACACATGCAAGATTGAAAATGTTTGTGGTAATTGGCACCCAATCAACAAAGTCGAGCCTCACCCTTCAGAAGCCCCTAAAATTGTGTATGTGTCATCACAGATGCACCTCAAGGGAGTGTAATTTTCAATTTTCATTTTAGAATTTGAGTCTTTTAGAGAGACAGAGGTGGCCTTGTTCCGAAGTGGACAAGAGGGTAGTTTCTCAATTCAATAAGACTTCCTTCAATATTTAGTGGATAGCCATCGGTCTGTTGTCTTAAACCTTTTGTTTCATTACCATTGTATTTTGAGCTACAATTTTTTTCTTTATATGAATAAAAAGTTCTTTTTTCTTTAAAACAAAAACCATAGTGCTGTTAATTATTAATAAATATGGGTTTTTTAGCATTGTTGTAACTTTTATTGCCCTTTTGGTCGGTCAATCATTTACATTTTGATTGAAATAGTTAGTGTTTTTCCTTTTTTCTCTTAATTTTATTACTGAAATTTAAATGGTTAGGCATTGATTTTAAGTTTCTTGAAATCCATATCTACCTATGTACTTTTATGATGATGTAGCCTATTCTTTTCATTTTTTATTGTCAGTGTTTTTCTTGTGGTTTCTTTTTTTGAATTTAGCCATGTGGAGTTGGGGATTGAACATCTAATCTTTAGATCAAATGTTTAACCTCTTAATGAGCTATGGACAGGCTGACTTTTTTCTTGTGATTTATAATATGGGAGGATTGTGTTAGCAGGGGGCTAGTGTGAACAAGCAACAAGGAAAGGGCTATAACAACCTTACTAGAATGAGCAATATGAGATGTCAACACTGTGCAGGCCCTCTTTCAAAGGATATGGTCTCGTGCCTTCTTCTGAGTTTTCTTCTATCGTCTTGGTCTACACAGTCTCACTTTAATCTGTAATTTGTTGTATATTACAGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGCTTCTCTATGGTATTATTCCTTTTTCTTATGGAACCTTGCCTTAGAAAATTGTATATTGCTCTTCTGTTATTTACTCTTCGAGTATAGACCATTTAGAAAATTGTATATTGCCTTAATCTTGTTTCCTTTCGTGTTGTACTTACCTGTGCATGCTCGTGATACCTCACTTTATTGTTGTGATGTTATCTACTTCTTGTAGATTAGCTCTGCTGTTGGCGGTATTGCTAGTGCTTTCTATGGATTTAACAATGGTAATATACACCTTCCCTTTCAAATTTCAATAAATCCAACAATTACAATACAAGCTATTATCCAAATGGCCTACTAAATTACATAATCAACACTAAACAATCCTACGTACTCTACTATATTCTGTTGTGTTCTTTTATATCTTAAATAGCTCATCTTTTATTGCCATTGCAGTGATGCCTGTTGTCCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGTAAGTACCTTTCTGCTTTCCAATTTGGGATGCTTGTGAACTGTTGCAAAATCTTTCTTCAGCTTAGTGTTTTTTAAATCTCAAGGGGCGATGCACAATAGTCTTCTAGGGCTTAAGCACTTGACGCAAAAAGATCTTTTTTAAAAGGTGCACTGCATATAAAAGTACTACATTTAGAAAACGGCTGATTGGAAAAGGGAACAAAAACCCATGGTTTTTTTTCTTTTAGAAAACGGAAATGCCACAAATAAAATTATCCAAATTGGACCAACATGAACGAAATGAAATTGTGTGAGCCCACAGAGTTTAACAAGGCAACATAAACAAACCCACATAAAAAAATCATGGGCTTTTGTTATAGATCTCTATATGAGGATCTATGTTTCTATTCCAGGAGTTCTTGGTCACATTCTCTGTGGGTTTGTGTTTCTAGCCTAGAAGTTCTTGTTTTCGTTCTTCTTGGGTTTTTGGTCCTATCTCATATCTGCTGATTTGATTCGAATGTTTTCTTTACAAACTCAAGTTGTTTGTCGTTCTACCACCTTGAGTTTGAGGGAGGGTGTTAAAGAAAAATAAAGTTTATTCTTATTTAATATTTCCATATTTGTATTTTTCCTTTATTAGTATTTTTGGTCTCTATTTGTTCACCAATGTAATAGGTTACTTTGATCGATCCAATATATTATATAAAATTATCAGTTTTTTGCTTATTAGAAGCTGAGTACCGCTATAGACTTCCAAAATGAATAGGCAGCCTTTTGATTTCCACGAGCGGGTGCATCAAGTAAGGGAGATGTGGAGGACCAAATATAATATCCATCTTTTTCTTATGCTGTTTGCTGCCTGATCTGTTGCTACATGCCTTCTAAGATCCTAACATTAGTTGGTGCTTTCCAAATAGCAGTGGATGATTTTTCCAGCTCATCTCTGGCACTCTTTCTCATGGCCAAGTGGGGTATTCTTTTTGGAGGTGTAATAAAGGACCTTCCAATGGCAGTTAGTTGCATAGAAGTTTTATTAGGATATCTGTTTCATCCCTGACTTGGCGGGGGATATCTGACTTTCTCTTCTTTTGATAATGAAATTCCAGTTCTTGTAAGGAAAAATGAAAGGTTCTATTTACTAGAGTTCATTCCCCAAAATAAATATTGTGTCAGATCTTGTTCTACATTCTACCTTCTATTTATAGGTAATTACGGAGTCCATTGAACAAATGCCAATTTTGTGTTAGGTTTGAGAAAAACAAGAGGATTTTAAGAAAAGTGGAGATGTCTTGGGGAAGGTTTGGTCTTTCAATTGGGTTTACCTTTGTTTATTGATTTGATAATAGAACTGGCAAGCTAATGTTCGTTATGACCCAACCAAGGATTAAAATATCTAATGGCGGTATTGATATCAAGATTTCAATTTTATAGATGTATCAATAAAATATCTATATCAACGGATATTTCTGTTATTCAAAATTTTGAAAATGTGTAGATTAATATTAAGTTGTTTTTACCCTTTAATCAAGTTATAGATATTGTTATTGGTATTTCTATTTATGTTATATTAAACAGATGACAATTTTTATGTTTTTTGAGCATTTATAAAAGATATTAAAGATATTTGCGGATATTTAATATTGATATCGAACTCTTCAATTTACGGATATTTTCATCCTATTGATGGATATTTACATTCTTGGACCCAACCTACGGCTTTTGGATTGGTAATATGGATTGTGCTTCACTGGATAGCTAATTAGGAAAGAAGTATGCTTGAGAGATTTAAAGCAGTCGTATAGAGCGAGGGTCTATGGAGGACTGTTTTTGTTTTTATTTGTTGTAATTTTTACTATTTACGGATGATTATGTGCTATTATTGCGTGTAATGTCTAGTCTTTACTGTCTTACTCATTTCATATTTGTAATGTCTTTTTTCCTATATGAGAATATGAGAATTAATTTTTGCATATTGAATTATTAAAACGATATTAATCTGTTTATTTTGTTGTTTCTTGGGTCATCTAGATGAAGAGAAATAATAAGATCTTTATAGACACGAGGAATGTAGAGTGGGAGGAAGTTTGGTCCTTAAATTTAACACCTTGCTTTGGGCTTGTGTCGAAGAATTTATTTATTATTTTTTTAGATCTTACTCTCTTGGATTTAGCCGTTTTCTTCTCTGCAAGGCTAGTCTCTGTTTGTTACCCTTTTCCCCCTACTGAGAACTTTTTCTTGAAAAAGAACATAAAATGCTGGTGTACATAGGGTGCAAGTACAGCTTCTTGAGATGAATTTCATGTTTTAGTCCTCTTGATTGGAAACATTTAATCTCACTTGCAGGCTCCTCCTGTGATTGTATTTTCTTCGGCTTGTGCAGGAATGACAGGTTAGTTATTTTGTTGTTATTTAATATTTAATAATTGGAGCTGGCTTTTTTTTTCTTTATCCAAAATGTTTTATATAGTATGGTATGGCAAATTGAGTACTTTACTTCTTTAGGATGGAGTAGTAGTGAGGCGCAATTCCATTTTGTTTAGCATTGGTAATAGGAACACATCATGAGTAAATTACCTTTGAAATAACTTTGATAGAAATTATTTGTGATATTTTCATTTGAAGATGATATTAAGTACAAAAATTGTTACTAAATGGTTGGTTACAGGTGGTGCGGTTCCAGCTTTGGCCCAACTTGTTTCTTCATCTTATCATTCATTAACATCGTCTTCAGAGGATGATAAGGCTCAGGATTCAAGATCTTCTTCTTCCTTGTAGTGGTAATGTATATAGTGGGGATTCTTATAGTATAGGTTTATACATACATATCTTATATTCCGCTTGAGGATAAGACAAAAGTTTTTATTTATTTATTTATGTGTGCTACATTCATTTTTGTTCTGAGCTACACGATCTCGAGCTGTGAGTTTTTTTCTTTCAATTTTGATAATGTCTCTCTTTAGGTTTTGGCCTCTTAAAATGAAATGCATGGTTCTCGTTATAGGGGAGGAGTATCCTTTAGATATATATAGGACTTCTAAAACACTTGGGAATCCTAGTCCTAGATAGACTTGAGTTATTGGTGAGTGGGGCCAATGTAATATAAAACAAGTGCATTTCAAGTATAGAGAACTTATAAGGAACAATTCATAATTCATAGGCTTCGAAAGATTTGGTTGGGGTTTTGTTTTGTAAACAATGAAATTGAGAAGAAATCAAATGATTAGAGAGAAGGAAATTCAAAGTGGTTTCCGTTTCCGCCTTCGTGAATTGAACATATCCTAGTGCATGTGGCTCTCTATGCACCTGTAACTCACTCTTGTAAGCACGTTGTGAAGACCTTTTATGCTCAGGACCACAACCCGAAGGCTTTCATATACTTTGAATTCTCAAAGAAAACTTGGTTTGTAATAACGAGAGGATAGAAAAGTGACTTGCCTTGTTAAATTCAATGAGAAGTCTAGGGCTAAGAATAAAAGCTTAGCAACCAAGATAAGTCTAGGGCTAATAAGAGCTTAGTTAAACTACCCCTTGACATCCAAGATAAGTCTAGGGCCAATAAGAGCTTAGTTAAACTACCACTTGACATGTACTTGGTTTGTACTTAGAACCAAGAAGTTTTAAGTTCTACTCTCAACTTCTATT

mRNA sequence

ATGAGCAATATGAGATGTCAACACTGTGCAGGCCCTCTTTCAAAGGATATGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGCTTCTCTATGATTAGCTCTGCTGTTGGCGGTATTGCTAGTGCTTTCTATGGATTTAACAATGTGATGCCTGTTGTCCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGCTCCTCCTGTGATTGTATTTTCTTCGGCTTGTGCAGGAATGACAGGTGGTGCGGTTCCAGCTTTGGCCCAACTTGTTTCTTCATCTTATCATTCATTAACATCGTCTTCAGAGGATGATAAGGCTCAGGATTCAAGATCTTCTTCTTCCTTGTAG

Coding sequence (CDS)

ATGAGCAATATGAGATGTCAACACTGTGCAGGCCCTCTTTCAAAGGATATGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGCTTCTCTATGATTAGCTCTGCTGTTGGCGGTATTGCTAGTGCTTTCTATGGATTTAACAATGTGATGCCTGTTGTCCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGCTCCTCCTGTGATTGTATTTTCTTCGGCTTGTGCAGGAATGACAGGTGGTGCGGTTCCAGCTTTGGCCCAACTTGTTTCTTCATCTTATCATTCATTAACATCGTCTTCAGAGGATGATAAGGCTCAGGATTCAAGATCTTCTTCTTCCTTGTAG

Protein sequence

MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSSSL*
Homology
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BLAST of CsaV3_4G027570 vs. NCBI nr
Match: XP_011653746.2 (uncharacterized protein LOC101207007 [Cucumis sativus] >XP_011653747.2 uncharacterized protein LOC101207007 [Cucumis sativus] >XP_011653748.2 uncharacterized protein LOC101207007 [Cucumis sativus] >XP_031740327.1 uncharacterized protein LOC101207007 [Cucumis sativus] >XP_031740328.1 uncharacterized protein LOC101207007 [Cucumis sativus] >XP_031740329.1 uncharacterized protein LOC101207007 [Cucumis sativus] >KAE8649604.1 hypothetical protein Csa_012289 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 1.9e-59
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV
Sbjct: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS
Sbjct: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120

Query: 121 SL 123
           SL
Sbjct: 121 SL 122

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BLAST of CsaV3_4G027570 vs. NCBI nr
Match: XP_011658376.1 (uncharacterized protein LOC105435977 isoform X1 [Cucumis sativus] >XP_031744137.1 uncharacterized protein LOC105435977 isoform X1 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFNNVMPVVQRSV
Sbjct: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSV 60

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVI+FSSACAGMTGGAVPALAQLV+SSYHSLTSSSEDDK QDSRSSS
Sbjct: 61  KGPMWLHFLIGAPPVIIFSSACAGMTGGAVPALAQLVASSYHSLTSSSEDDKTQDSRSSS 120

[Close]
BLAST of CsaV3_4G027570 vs. NCBI nr
Match: KAE8647791.1 (hypothetical protein Csa_004224 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFNNVMPVVQRSV
Sbjct: 56  MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSV 115

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVI+FSSACAGMTGGAVPALAQLV+SSYHSLTSSSEDDK QDSRSSS
Sbjct: 116 KGPMWLHFLIGAPPVIIFSSACAGMTGGAVPALAQLVASSYHSLTSSSEDDKTQDSRSSS 175

[Close]
BLAST of CsaV3_4G027570 vs. NCBI nr
Match: XP_008455891.1 (PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_008455892.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_008455893.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901867.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901868.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901869.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901870.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_016901872.1 PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo])

HSP 1 Score: 226.9 bits (577), Expect = 9.7e-56
Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN VMPVVQRSV
Sbjct: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNTVMPVVQRSV 60

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLV+SSYHSLTSSS+DDK++DSRSSS
Sbjct: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHSLTSSSKDDKSRDSRSSS 120

Query: 121 SL 123
           +L
Sbjct: 121 TL 122

[Close]
BLAST of CsaV3_4G027570 vs. NCBI nr
Match: XP_038882424.1 (uncharacterized protein LOC120073695 [Benincasa hispida])

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53
Identity = 111/121 (91.74%), Postives = 116/121 (95.87%), Query Frame = 0 

Query: 2   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVK 61
           SNMRCQHCAGPLSKDMETSAWT PPLIRDSFSMI SAVGG ASAFYGFNNVMPVVQRSVK
Sbjct: 375 SNMRCQHCAGPLSKDMETSAWTTPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVK 434

Query: 62  GPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSSS 121
           GPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLV+SSYHSLTSSS++ K QDS+SSS+
Sbjct: 435 GPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHSLTSSSKNVKTQDSKSSST 494

Query: 122 L 123
           L
Sbjct: 495 L 495

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BLAST of CsaV3_4G027570 vs. ExPASy TrEMBL
Match: A0A0A0L0B0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338930 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV
Sbjct: 175 MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 234

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVI+FSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS
Sbjct: 235 KGPMWLHFLIGAPPVIIFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 294

Query: 121 SL 123
           SL
Sbjct: 295 SL 296

[Close]
BLAST of CsaV3_4G027570 vs. ExPASy TrEMBL
Match: A0A1S4E0V5 (uncharacterized protein LOC103495968 OS=Cucumis melo OX=3656 GN=LOC103495968 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.7e-56
Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN VMPVVQRSV
Sbjct: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNTVMPVVQRSV 60

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSS 120
           KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLV+SSYHSLTSSS+DDK++DSRSSS
Sbjct: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHSLTSSSKDDKSRDSRSSS 120

Query: 121 SL 123
           +L
Sbjct: 121 TL 122

[Close]
BLAST of CsaV3_4G027570 vs. ExPASy TrEMBL
Match: A0A6J1EAN3 (uncharacterized protein LOC111432392 OS=Cucurbita moschata OX=3662 GN=LOC111432392 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 108/121 (89.26%), Postives = 112/121 (92.56%), Query Frame = 0 

Query: 2   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVK 61
           SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN+VMPVVQRSVK
Sbjct: 32  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVK 91

Query: 62  GPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSSS 121
           GPMWLHFLIGAPPVIVFSSACAGM GGAVPALAQL SSSYHS  S S+DDK  DSRSSS+
Sbjct: 92  GPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSST 151

Query: 122 L 123
           +
Sbjct: 152 M 152

[Close]
BLAST of CsaV3_4G027570 vs. ExPASy TrEMBL
Match: A0A6J1HN28 (uncharacterized protein LOC111466117 OS=Cucurbita maxima OX=3661 GN=LOC111466117 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52
Identity = 107/121 (88.43%), Postives = 112/121 (92.56%), Query Frame = 0 

Query: 2   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVK 61
           SN+RCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN+VMPVVQRSVK
Sbjct: 32  SNIRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVK 91

Query: 62  GPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQDSRSSSS 121
           GPMWLHFLIGAPPVIVFSSACAGM GGAVPALAQL SSSYHS  S S+DDK  DSRSSS+
Sbjct: 92  GPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSST 151

Query: 122 L 123
           +
Sbjct: 152 M 152

[Close]
BLAST of CsaV3_4G027570 vs. ExPASy TrEMBL
Match: A0A6J1D6Q7 (uncharacterized protein LOC111018136 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018136 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47
Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN+VMP+V+RSV
Sbjct: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPIVRRSV 60

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHS--LTSSS 109
           KGPMWLHFLIGAPPVIVFSSACAGM GG VPALAQL S+SYHS  LTSS+
Sbjct: 61  KGPMWLHFLIGAPPVIVFSSACAGMAGGGVPALAQLFSTSYHSAVLTSST 110

[Close]
BLAST of CsaV3_4G027570 vs. TAIR 10
Match: AT3G04040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.9 bits (424), Expect = 5.0e-42
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 0 

Query: 5   RCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVKGPM 64
           RC HCAGPL+K++ET+ WT+ P IRDSFSMI SAVGG ASAF GF++VMP+V++ +KGPM
Sbjct: 15  RCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPM 74

Query: 65  WLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQD 116
           WLHFL+GAPPVIV SSACAG+ GGAVPALAQL SSSYH+   SS+  + QD
Sbjct: 75  WLHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAAVHSSQPPQGQD 125

[Close]
BLAST of CsaV3_4G027570 vs. TAIR 10
Match: AT5G18250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 163.7 bits (413), Expect = 9.4e-41
Identity = 76/111 (68.47%), Postives = 92/111 (82.88%), Query Frame = 0 

Query: 4   MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSVKGP 63
           +RC HCAGPL++++ETS WT+ P IRDSFSMI SAVGG ASAF GFN+ MP+V++ +KGP
Sbjct: 10  IRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGP 69

Query: 64  MWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSSEDDKAQ 115
           MWLHFL+GAPPVIV SSACAG+ GG VPALAQL SSSY +   SS+  +AQ
Sbjct: 70  MWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAAVHSSQPPQAQ 120

[Close]
BLAST of CsaV3_4G027570 vs. TAIR 10
Match: AT2G41945.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 6.8e-15
Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           + + RC  C   L+ + E   WTI P++ D+ ++  S +GG+ SA + FN  +P +Q   
Sbjct: 26  LGSARCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRF 85

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSS 109
            G   L FL+G P ++V+S   A   G A+P  AQL  +SY++ +S+S
Sbjct: 86  SGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQLTVTSYYASSSAS 133

[Close]
BLAST of CsaV3_4G027570 vs. TAIR 10
Match: AT2G41945.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 6.8e-15
Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           + + RC  C   L+ + E   WTI P++ D+ ++  S +GG+ SA + FN  +P +Q   
Sbjct: 26  LGSARCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRF 85

Query: 61  KGPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVSSSYHSLTSSS 109
            G   L FL+G P ++V+S   A   G A+P  AQL  +SY++ +S+S
Sbjct: 86  SGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQLTVTSYYASSSAS 133

[Close]
BLAST of CsaV3_4G027570 vs. TAIR 10
Match: AT2G41945.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 6.6e-10
Identity = 40/146 (27.40%), Postives = 65/146 (44.52%), Query Frame = 0 

Query: 1   MSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGGIASAFYGFNNVMPVVQRSV 60
           + + RC  C   L+ + E   WTI P++ D+ ++  S +GG+ SA + FN  +P +Q   
Sbjct: 26  LGSARCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRF 85

Query: 61  KGPMWLHFLIGAPPVIVFS------------------------SACAG------------ 109
            G   L FL+G P ++V+S                        S CA             
Sbjct: 86  SGSKRLSFLVGVPLLLVYSGVGAAFGESLQAAISFPIVWLEYESRCAAQCRIATFTFSLL 145

The following BLAST results are available for this feature:
BLAST of CsaV3_4G027570 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653746.21.9e-59100.00uncharacterized protein LOC101207007 [Cucumis sativus] >XP_011653747.2 uncharact... [more]
XP_011658376.11.1e-5695.83uncharacterized protein LOC105435977 isoform X1 [Cucumis sativus] >XP_031744137.... [more]
KAE8647791.11.1e-5695.83hypothetical protein Csa_004224 [Cucumis sativus][more]
XP_008455891.19.7e-5693.44PREDICTED: uncharacterized protein LOC103495968 [Cucumis melo] >XP_008455892.1 P... [more]
XP_038882424.11.2e-5391.74uncharacterized protein LOC120073695 [Benincasa hispida][more]
BLAST of CsaV3_4G027570 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G027570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0B01.2e-5999.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338930 PE=4 SV=1[more]
A0A1S4E0V54.7e-5693.44uncharacterized protein LOC103495968 OS=Cucumis melo OX=3656 GN=LOC103495968 PE=... [more]
A0A6J1EAN31.8e-5289.26uncharacterized protein LOC111432392 OS=Cucurbita moschata OX=3662 GN=LOC1114323... [more]
A0A6J1HN285.4e-5288.43uncharacterized protein LOC111466117 OS=Cucurbita maxima OX=3661 GN=LOC111466117... [more]
A0A6J1D6Q74.0e-4789.09uncharacterized protein LOC111018136 isoform X2 OS=Momordica charantia OX=3673 G... [more]
BLAST of CsaV3_4G027570 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04040.15.0e-4270.27unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G18250.19.4e-4168.47unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G41945.16.8e-1535.19unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G41945.26.8e-1535.19unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G41945.36.6e-1027.40unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..122
NoneNo IPR availablePANTHERPTHR34459:SF3OS01G0264500 PROTEINcoord: 2..121
NoneNo IPR availablePANTHERPTHR34459OS01G0264500 PROTEINcoord: 2..121

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G027570.1CsaV3_4G027570.1mRNA