CsaV3_4G027390 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G027390
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
Locationchr4: 16530676 .. 16536851 (+)
RNA-Seq ExpressionCsaV3_4G027390
SyntenyCsaV3_4G027390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTGTGTACCCATCGGAGAAAGCTTGAGAGATTTTCAAAGGCAGAGAGAAAAATGGCAGGATGGAGATGGCTGGAAGCGGCACTTCCTCTCGGAATTATCGCCGGAATGCTTTGTGTAATGGGTAATGCTCAATATTACATTCACAAAGCCGCCCATGGCCGGGTAATTTCCTTTCTATTGCTTTCGATTTCAGCGTTTTCCCCTCTTCTTTGCTCAGTGGATCTTCTTTCTCAAAGTTCCGATCAACGATCTCTGTAATTAGTCTCTGGATTTTATTTATGTGGTTTTTGTTTTTGTAGCCTAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGCCGGGACAAGAAACTTGTTGAGAATTTATCCGCCGCTTCTCATAGTTGATTTTATTTTCGACCTGCATCCCGGTACATGTTTATGCGACTTTATTACTATTTTTCCTGTTTTTAAAAATGTTCATCTTAGGGATATGAAACTATTAGGACGATCATCATTCTATCTCTTGGGCTTGGAGAATGTTGAATTTTAACTGTAGTATGATTTTTTATGCAAGGCATATATAGATTTACAGTGACATTTTTTCTTTAATTAGTTGTAGACAATTGGTAGGCACTTCTTGTATAGTTTTGTTGGGAGGGGGGGTTCCCTCTACCCCTGCCCTTAGGCTATGCTTTTGTTTTTCTTTTGCAATATACTCCCCAATTTCTTATTAAAAAAAGAGTGTACATTCATGTTTATAAGAATTGAAACTCCATCGATAAATCCAATATACAAAAGGGTAATTAGATAATCTCACTAACATATAAGCCTACGGAGTTGTGGAAACACATTCTCCCAAACTGGTGAGGAGATTACTAGTGATAAAACAGGAAAAGGCACCGCAAGAGCTAGTTCAGATGGTCCTTAAATTCCCAAGCTACCAAAAATTGTTTATCTGTTCCTTCAAAGGCCCTTCTTTTCTTCGTTGCAGAAATTTAGCGCTGGTTTATGTGTTCATTTTGTTGCTATGCTATTTGAGTCCATCGTTGATAATCTGCTGTGAGTTGGTAGGGTAATTAACTATAGTCTATAGTAAAGTAACTTTTAAGCCCCTACATTTGCGATGATGTTTAGTCTAACCCCGTTGCCAAAAACTGGGCTTTAAGTTTACACTTAGTGTCAATTGTTAAAGTGACAGCTTCAGGTGATTTATTAACCAACCATGCAACTCTTGGTTTAGTTGGTTCCGTTTTGGCTAAAAGTAAAACGAAAATGAGATGGAACTCTTCAGACTGAAAATGGCGGAGGCAATGGTGGCTTGAGTGTATGAAGTTAAGGTCAAAGGGCTAATGCATGAGAGAATTGTAAATAAGAAAGGAGGACTTGAGGGGGGGCGGGGGGCGAATTAATAGGGAGGGAGATTGGAGGCATGGAACATGGCATGAGTGAGCTAGTGCTGGTTGAGATTTGGGAAGTGAGAGGGAGGAAAAAAACTAATATTTTGGCCAAAAAAATCTCAGTGGTTCATGAATCATGTCTATCTCTCCTTCATAGTGTATTATGTGTCAGAACCATGCTGAATCCACTGACCATCTATTTGTGCACTATTTTTTTGCTTCCCATTTGAATGCTCAATGATATTTTTTATGTCCTTGCATATCTTTTGGTGGTCGTTCATTTATGAGCACAAAGAAGACAGTTTGGTTGGCTATTTTTTCAAGTTTTCTTGTGACACTTTGGGGTGATGTAACAAGTCTCTATTTAGAGGCTCTTTCTCTTCTTTTGATTCCTTTCTTGATTTGGTTCTGTCTACAACTTCTTACTGGTACAAACTGGGCATCTTTTTAAGAATCATAGTCTTTCTTTTTTAGTATCCAATTGGAAATCACTTTTGTAATCACCTTTAGGTGCATGGGTTTCTCCATATTTCATTTATTTATTCAATGTATTGTTTCTTATCTAAATAAATATATCATGGTATTGGGCAAAAATACTTGATTTCATTTTCATTTGCCACTACTTCGTGGGGACATCTTTTTTATTTTTTTGATGAAATCGATGCCTTTCATTGAGAAAAAAAATGAAGGAATACAAGGGTATACAAAAAAAAAAAGAAAAACCAGCCCAACAAAACACCCCCATTAAAAGAACGGGGACTAACTAAGTAAAATGTTTCCTATGGAATAGTTGCAAAAGCTCTTTGAAATCGAAGCCCAAAGACGAAATCTCACTATGCACCCTCTCCCTACCCCAAAAACACCTGTTCGTTTCTCACCCCAAATGTCCAGATAACCGCACCCTGACAAGTCATAAAAAGCCCAGTTTATCTTTGAAGGACTGATAGAGGAGGAACTCTTTGATTGTTGCTCTCACACTCCACATTAGCAGCAAAGCTAATACTGAACAATGGAGGAAAGAGCTCCACACAGCTCGAGCATACTGGCAATCCTGCCAAAAATGATGATCAAGATCTTCCTCTGCCTTTTGAAAAAGCATGCAACAAAAAGGCCCAAGAAGCAAAGTTCTCCTCCTAACAAGCTTGTCGATGGTATTAACCCAACCAAGCAAGACTTGCCAAATGAAGAACCTAACTTTCTTAGGAACTTTAATCCTCCATACCACATAAAAAACAGACTCCTTAGGGGAATCCAACAAAAAACTAAACAAGGATTTATAAGTATAACCCCGATTAGGATTAGGGTTCCAAACACGAGCATCGCTTCTCCCCTCCCTAGAAAAGCACCCCTCAAGCAAGGAAAGAAGAGAGGCTACCTCTATCATTTCCCTACTAGTCAAATTACAGCGGAACCCAAAATAAAAAGACACAAGATTCTCAGAACCAACCAAAAGATCTGGAATCGCACAATTTTTGGAAGTGGATAAATGATAAAGATGTGTAAATAAAGAACAAAGGGAATTCTCCCCCACCTGTTGATCCTCCTAGAAGTAATTTTCCTTACCATTCCCCATAAAACAACGTGTAAGATAGTAGTGAGCTCGAAAGAGATATCCTTCCAAGGATTTCAGAATGTGCCTTTAACCCCTTTCGTCGTCCACTCAAAGGGAAGGGAGCTATGATTGCTCACAACAATCCTATGCCATAAAGAATCAGGTTAGAGAGAAAAGTGTCAAAGCCACTTTGCCAACAACGCTCTGTTGCAGATTTTAATATTAACAATCTTTTAACAATCTTTTAACCTCCTGACTCATAGTTAGGCAATTGCATTGCCAGGAAACTCTAACTCTCTACTTGCCAGTGTTTTGATTATCCATCCTTTCAAAAAGTGAGAAGGGATTCTTGTAACTTATTTTTGTTAGAGCCTCTTTTTGTCCATTTGGAATGAACAAAATTTTTGCATCTTCAAGGATAAAGAATAGGATAATGATAGTTTGTAGATTTTTTTAATCATTTTTGGCTCTCTATTGGTGTAAAATATCAAATATCTTCCTACTTTCATAGCTATGGCCTCACTTCTCTTGTAGCGCTATAGAAGGAAATTGGTTTGTTCTGGTTTCATATTGTTTTTGTTTCTGTTTGTAATCCCTTTGGATGGGTTTATTTATTTTGCCTTTTTATGTAATTTTTTAATGAAAAATTGTTATAAAAAAACTAGTATAATACTTAAATAATAAAAAAGGCTTACTTAACATGACATACAAGTTAGAAAGACACTTTCTTGCCCCTCCATCTGAAGTGTGGTTCAAGTCATTGATTGATGTTGGTTTTAGTTGGTTATCTCAATCTGGATTCGCTCGTTCTCGCCTTAGGAGAACCACTTGTGTGTGATCTTTGTAGATACCTTATTTTGTCATTTTTTATTTTTTATTTATATTTATTTATTTTATTTTTTAAAAATAAAATTGGATTTGAATTTAACTTAAAGAAAACAAAAAACAAAAAACAAAAAAAAAACAAGAAAATAAAAACAAAAGAAAAAAAACCTAATCTCACGATTCCCCTCCCAATTTTCCTCAACTATTTCCTCCATATATCCCCATTTTCTCTCCCACAGTTTTTTTTCTTTCCCACTTCACTTCTCCCACTCTAAAAAAACCAACTAACTGATTACCCTATAAAAGGATCCCAAGAGGACTTAAGGAGATACATTGAGATTTGCTTTTAGGGTGAAAGGGAGGTTGAGATTTTCTTAGGAAACTTTTCTCCCAAACTAAGGTCTTCAAAGGTATTTTTATTTTTATTTTTTTCTGAATTTCTTTTCTTTTCCCACTTGAATGTTGCTTCTCACTAATTTCAACTAATTTGGTGATTAGAATTAGGGTTTGCTGTGGCTTAAAATTTATTATTACAGGTTTATTTTAGTTGAATTTTGTTGATTTTAGTTTGAATTTGGATTTTATTAAATTTGTTGTTTATTAATTAAGGCAGAGTTATTTGATATTAATTGGTCATCATTTCTAATATTTCTAATATTTTGTTTTGCTATTATTATTATTATTTACGAAGTAATGTTTCTTCATGGGTTTTATGATTTAAATTCCACAAGTACATGAAATTTCTCTATTTGAAAATTAATTAATAAATTGTCTTTTAAACAATATATAACATATGTTTTCTATGGAATTTATTAATTCTTTAGATATATGGAATTTCCTAAACATCTATTACGGAGATCAAAATATCAAAGTTTAATATTTTAATATTCTTCAGGAATGAAAAACCATCCTTTGAAACAATAAATAAACTTAATGGCTCTTTTGCCACCCATAATCATCAATTCATGCTTTTTCTTAGATGTGAATTGAGAACAATGGGACATTTTTAAAAAATCAAATAAAAAACTTTGTTTTGTAAACCTTTGTAATTTAGTTTAAAAGATAAAATTTGGTAGGTTTTTTTTATATATTTTTGGGTGACCAATCGGTTAGTGGAGATTTCGAACCTATTTATGACGTTGGCATCGTGCTGTGATAATTTTAATCTTAATGCTCGAAGTTTATGTAGAATTCTAAATCTGTAACAGTTCCAGTGCCCTTTTATTACTTAAATTCTTAAAAGTTTTCAGATAAATTCCATTGATATCTAAAGCCTAATCTTGTCTCTTCTAAACGTGAACAGTTTTAGCCATTACTTGACTTGTATTCTTTCTTTGAGATTTTTTCGTTGGAATATTTCTTCATCTTTTTAGTGTGAATTTCCTGGTGCTACTACTATGGATGGATTTCCTTCCGAAATAAGTATTTCCTTTCATAAATCGAGGAAGCTTACCTAAACAAATCCAAAACCCTTTCCTACATAGAACCTTGACGCTAAAAAGTGTCGTTTGAAATTTTTACATTTCGAAACTCCTTGCTCGCATGCATATTTGCACTTGTAGGTTTTGTGCAAGATTTCAATTTGAGTTCATGGGTCTTTCCTACGAAGCTTGTGTAGCTATTAAGTGGACTCTCGGTCTTGCATAGAGCTTCCGCAAACCATGGAAGTCGCCTAAACAATGCCCCATTATCCTGCTACATAGAGCTTTGACACTCAAAATATACTTTTGAAATTTGCACATTTTAAAACTCATCGCTCACATGCAAACTTACGTTTTTGTCCATAATTTAATCTGCATTCTTGGGTTTCTTCCCTACCGTCTTTTCACTTATTAAATGGACTCTCAGCTTTCCTTCTGAGGCATTTGGTCATTTTCCTTATCTTTTAATTACTCACTATTAGGAGACACTTGAATTTAGAACTAACACTAATGTTGTCCTAGGTACAGGAGCTGTGGATGCACTCTTGATGAAGGAATAAAAGCTTTTGTTGCAGAATGCAGATATCTATGCAATGATGATCACTGCCATGAATTGTCAATTTTCTTCGTTGTTCCTATGTTGATCTGAACATATGTAAAATTCATCTTCAAGAATTACTTCTTTATATCAAAGTAGATTTTCTCCAATGTGTTGACTAGTGAGTTTCTGTTTATCTGGAACTAGCTCTTGCCTCGAGCAGGAGGAAACCCTGTACTCAATGATTGATGAACAGCTTTGAATTTTTGTAAGTTTCTGTCTTCTGTCATCCTTTTCCCATATGAAAAACCATGATATGGATGTTTGTTGCAATAAAAACAAGAATTAAAGT

mRNA sequence

ATGGCAGGATGGAGATGGCTGGAAGCGGCACTTCCTCTCGGAATTATCGCCGGAATGCTTTGTGTAATGGGTAATGCTCAATATTACATTCACAAAGCCGCCCATGGCCGGCCTAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGCCGGGACAAGAAACTTGTTGAGAATTTATCCGCCGCTTCTCATAGTTGA

Coding sequence (CDS)

ATGGCAGGATGGAGATGGCTGGAAGCGGCACTTCCTCTCGGAATTATCGCCGGAATGCTTTGTGTAATGGGTAATGCTCAATATTACATTCACAAAGCCGCCCATGGCCGGCCTAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGCCGGGACAAGAAACTTGTTGAGAATTTATCCGCCGCTTCTCATAGTTGA

Protein sequence

MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSAASHS*
Homology
[Close]
BLAST of CsaV3_4G027390 vs. NCBI nr
Match: XP_004142669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >XP_031740619.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >KGN54471.1 hypothetical protein Csa_012404 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 2.1e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSAASHS
Sbjct: 61 LSAASHS 67

[Close]
BLAST of CsaV3_4G027390 vs. NCBI nr
Match: XP_008463294.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo] >XP_008463295.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo] >XP_008463296.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo] >TYK06216.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 6.0e-31
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSA SHS
Sbjct: 61 LSATSHS 67

[Close]
BLAST of CsaV3_4G027390 vs. NCBI nr
Match: XP_038881013.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Benincasa hispida])

HSP 1 Score: 142.1 bits (357), Expect = 1.7e-30
Identity = 64/67 (95.52%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRW+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSAASHS
Sbjct: 61 LSAASHS 67

[Close]
BLAST of CsaV3_4G027390 vs. NCBI nr
Match: XP_022950918.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata] >XP_022950920.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata] >XP_023543068.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita pepo subsp. pepo] >XP_023543069.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.1 bits (344), Expect = 5.6e-29
Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 3  GWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLS 62
          GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+S
Sbjct: 2  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVS 61

Query: 63 AASHS 68
          A SHS
Sbjct: 62 AGSHS 66

[Close]
BLAST of CsaV3_4G027390 vs. NCBI nr
Match: KAG7033699.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.1 bits (344), Expect = 5.6e-29
Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 3   GWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLS 62
           GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+S
Sbjct: 37  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVS 96

Query: 63  AASHS 68
           A SHS
Sbjct: 97  AGSHS 101

[Close]
BLAST of CsaV3_4G027390 vs. ExPASy Swiss-Prot
Match: Q9C9Z5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At3g08610 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.6e-23
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 6  WLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSAAS 65
          WLEA LPLGII GMLC+MGN+QYYIHKA HGRPKHIG+D WDVAMERRDKK+VE  +A S
Sbjct: 5  WLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKAAAPS 64

[Close]
BLAST of CsaV3_4G027390 vs. ExPASy TrEMBL
Match: A0A0A0L2Y7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_4G337280 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.9e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSAASHS
Sbjct: 61 LSAASHS 67

[Close]
BLAST of CsaV3_4G027390 vs. ExPASy TrEMBL
Match: A0A1S3CIY2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501486 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-31
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSA SHS
Sbjct: 61 LSATSHS 67

[Close]
BLAST of CsaV3_4G027390 vs. ExPASy TrEMBL
Match: A0A5D3C7B6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00800 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-31
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSA SHS
Sbjct: 61 LSATSHS 67

[Close]
BLAST of CsaV3_4G027390 vs. ExPASy TrEMBL
Match: A0A6J1GH44 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111453870 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.7e-29
Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 3  GWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLS 62
          GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+S
Sbjct: 2  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVS 61

Query: 63 AASHS 68
          A SHS
Sbjct: 62 AGSHS 66

[Close]
BLAST of CsaV3_4G027390 vs. ExPASy TrEMBL
Match: A0A6J1HU02 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111466140 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63
          WRW+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN SA
Sbjct: 3  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENFSA 62

Query: 64 ASH 67
          ASH
Sbjct: 63 ASH 65

[Close]
BLAST of CsaV3_4G027390 vs. TAIR 10
Match: AT3G08610.1 (unknown protein; Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 2.6e-24
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 6  WLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSAAS 65
          WLEA LPLGII GMLC+MGN+QYYIHKA HGRPKHIG+D WDVAMERRDKK+VE  +A S
Sbjct: 5  WLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKAAAPS 64

The following BLAST results are available for this feature:
BLAST of CsaV3_4G027390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142669.12.1e-31100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >... [more]
XP_008463294.16.0e-3198.51PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis... [more]
XP_038881013.11.7e-3095.52NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Benincasa hispida][more]
XP_022950918.15.6e-2993.85NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata... [more]
KAG7033699.15.6e-2993.85NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, partial [Cucurbita... [more]
BLAST of CsaV3_4G027390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C9Z53.6e-2380.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thal... [more]
BLAST of CsaV3_4G027390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2Y79.9e-32100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis sativus ... [more]
A0A1S3CIY22.9e-3198.51NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo OX=... [more]
A0A5D3C7B62.9e-3198.51NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo var... [more]
A0A6J1GH442.7e-2993.85NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita moscha... [more]
A0A6J1HU023.0e-2893.65NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita maxima... [more]
BLAST of CsaV3_4G027390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G08610.12.6e-2480.00unknown protein; Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1PFAMPF15879MWFEcoord: 6..57
e-value: 9.3E-11
score: 41.7
IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1PANTHERPTHR17098NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNITcoord: 6..65
NoneNo IPR availablePANTHERPTHR17098:SF3BNAC05G43940D PROTEINcoord: 6..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G027390.1CsaV3_4G027390.1mRNA