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CsaV3_4G026750 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGTGCTGAAGGGATCGGTACCCATGTCATTTGGGGGCAGTGAGCAGCCAGCAGCATATGGTGAGTTGGTGTCCATCGGTGGTCTGAACCCTGATGTCAACAAGAAATTGAGTGCTGCAATTTCTGCAATCCTGGAGACCAAGCTATCTGTTCCCAAGTCAAGATTCTTTCTCAAATTCTACGACACCAAGGCAAGTTATTCTATCTTTTTCTCAAGATGGGTTACTGAAATGCATGCACTTCTCATTGCATTTCTTATTTTTGTTTAGGCCCATCAGAGTCAAGAATATGCACAGTGTTTACATGCTTTACACCAGAACTAGAGATCATGTAACTAAATCTTTTTTTCTATTTTGAAACAAATGTGCTCAACTCCTGGCTGTCTTTTGCAAACATTTGAATCACTTTTAGACACTAATTTCACATTGACTTCTCTTAAATGGCTTATGATAAACCTGGGAATGGTACTGAGATAATAATTTTTTATGGCTGCTGCAGGGTTCCAACTTGGGATGGAATGGCTCCACTTTCTAAGTTAACTTCATCTGTAAGCTCTTGAAATTCCCAACTTTTATATTTGCTGGGACCTAGTTATAAGGATTTGGTATTGTTAACCCTTCATATTATATTGAGTTCTGTCTAGATTCCCTGTGACTTTTGGTTATGAATCATAGATCGAGTTATAATCTACCAAGTTTTAATGAGTACTTTTATTGGTTTAACACTCTTAACATTTTTAATCATTTTGAAAGACATACCTTAATACCTTAAGAAGTTTGCAGAATATACCTTTAATTGTTTTTTACTTTTGTTTTTGTAATCGCCCATCATGTGATGACAAACAGGAAATTTGATTTCAAATTCTTCAAATCATGAGGCAACTAAGTGATAGATGATAATAATTAAGCAATGTTTTTTTTTTTTTTTTTTAAAATAAATAATCTATAGATTCAAGTCCTGTTGATATACGTGCGTGTTTGTTTTATTGGTGTTTACTTTTAAAAATATAGGTATTTTCTACATATTTTTCCTTTTAGGAAATAAATAGGAGGTAGCAAAGACATCTATTTTCTTTATTCCTAAAATTATGATTATTTAAAGGGCAACAAATTATTGTTATTTATTTACTATTATTGAAGATAACTATTTTTAGGTTTAGTTTATATTTGGTTCCTAGTTTTTTTCTTTGAAAAAATCTAATCTTAAGATTTACACTTTTAACCTCATTTTTTTTTTCTATTAAATGTTAGCATTTAGTTGTTGGCATTAATTTCTATTAATTCTTAATTTTAATATGGATGAAAATTAATTATAACTGTTTAAAATACTTTATGATTTAATTAAAATACATTAATCATGACAACTTTTGTACACAACACACCTTTCTTGGGACAATTGTGTCTTATTGTCAACAAAAGTTCCTACACCATTATTTTTTAGTTACAAAAGTGTGATTGATGACAGTATTACGCTTCAAAATAAATGCATATCATGACTGTTTTAAATGTTAAAGAAATACTTGTAATATATTAGAAATTTATGGAAGTTTGTTTGATTTGAAACAAAATATTGACACAAATACCAATTGAGAGTGTGCAAATAATTTCTTTCTACTATTTCTTTTTTTAAAAAAGGAACTATGTACGAAGAAATTAACCACAAAACTTCGGGAAAGAAAGTAAATACAAGTTTTGCCATAAAAAAATATAAACGTATAAAAAGTATGTGTTTTTTTTCTTGACAACGTTTCAAATATGTCAAGATTTTTGTGTGAAAATGTTAAAAAGGAAATCAATTTGATGTGTTTTCTATCCTTTTTAAAATAGTAAAATATTAAAACTATTTATAAAATATATTTTTTTTCTATATTTGGTAAATAGTTATATATTTTTTTGTTATTCAAGTAGTACAAAACATAGTATGATCATTTTGATTAATGTTTATTATTATTATTATTTCAAGAGGTGGTCATTGATGGATAAAGTTATTGAAAACATTGGAGGGAAGGAGAGTTCATTGTTTCAAGTTTTAACCCACAAAGAAGAAATTTAACGTAACAAAATTGAGGTTAAAATAATAATTGTTGTTTCTCGTCCATTGAAATATTTATTTTGTGCTTTTCTTGATTTTAACAAAGTTTATAATTTATTTTTTTATAAAAAAAATTATCTATTTTTTAAGAGATAAAAAAAAAAAAGTCCATCTTCCCAAACTGAATTGAATAAAAGAAGAAAACATCCCTATATTTTTTGAAATGATTTGCAAATAACACCATTTTTACAAATATCTTTCGAAAATGTATTGATGTTGGCTTTGAAATGCATAAATCTTTTATTATTAAATTTTATTTAGATTTAAATTTCAATGGTAACAAATGTCTCTCTCTCTCTTTCTCTCTCACGTATATATATATATATATGTATATATAGACATAAACAGAAGAAAAAAGAAGAAAGAAAAAGTGGAAACCGATTTTTGAGTATCTTCCCTCTGGCGCCTCCTTTCCCTCAATTTCCGGCCACCCTTCCGTGCAACTCCATACTTTCCGCCCACTTATAAACCAACCAAATTCCTTCTTACCTTTCCCATTTCCCTTTCCTCCACACAATGCAGTCCTCAGCTTCTCCGGTCATCCTCCCCATTTCCAATCCCCAATCCCAACCTCAAATCCCCCTTTCTTCCTTCTCTAGCCATCTCCTCCTCTCCCTCCGCCACGCCTTCTCCCGTCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCTGAATCCCTCTCCGAAGCCACTCTCCGCATCCGCAAGAACTACTCCTATTTCCGCGTCAATTATTTCACCATCATAGCCCTAATTCTTGCCATTTCACTTTTCTCCAATCCTTCCTCTCTCTTCCTCTTGATCGCCCTTCTTTGCTCTTGGATCTTCCTCTATCTCTTCCGCCCCTCCGATCAGCCGCTTGTTCTGTTTGGTCGCCACTTCAGAGATAGCGAGATCTTGATTGGTCTCGTTGTTTTCACCGCCTGTGTTGTTTTTCTCACCAGCGTTGGATCTGTTCTTGTTTCTGCTTTCACCGCCGGTTTCGCCGTCGTCTGCGCTCACGGTGCTCTCCGATCTCCCGATGATCTGTTCCTGGATGAGCAGGAAGTTAATACGACTGGGTTTCTCGGTATCTTCGCTGGCGCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGGCGCCGCTCCTTCCGGCAGATAA ATGATTGTGCTGAAGGGATCGGTACCCATGTCATTTGGGGGCAGTGAGCAGCCAGCAGCATATGGTGAGTTGGTGTCCATCGGTGGTCTGAACCCTGATGTCAACAAGAAATTGAGTGCTGCAATTTCTGCAATCCTGGAGACCAAGCTATCTGTTCCCAAGTCAAGATTCTTTCTCAAATTCTACGACACCAAGGCAAGCCCATCAGAGTCAAGAATATGCACAGTGTTTACATGCTTTACACCAGAACTAGAGATCATGGTTCCAACTTGGGATGGAATGGCTCCACTTTCTAAGTTAACTTCATCTTCCTCAGCTTCTCCGGTCATCCTCCCCATTTCCAATCCCCAATCCCAACCTCAAATCCCCCTTTCTTCCTTCTCTAGCCATCTCCTCCTCTCCCTCCGCCACGCCTTCTCCCGTCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCTGAATCCCTCTCCGAAGCCACTCTCCGCATCCGCAAGAACTACTCCTATTTCCGCGTCAATTATTTCACCATCATAGCCCTAATTCTTGCCATTTCACTTTTCTCCAATCCTTCCTCTCTCTTCCTCTTGATCGCCCTTCTTTGCTCTTGGATCTTCCTCTATCTCTTCCGCCCCTCCGATCAGCCGCTTGTTCTGTTTGGTCGCCACTTCAGAGATAGCGAGATCTTGATTGGTCTCGTTGTTTTCACCGCCTGTGTTGTTTTTCTCACCAGCGTTGGATCTGTTCTTGTTTCTGCTTTCACCGCCGGTTTCGCCGTCGTCTGCGCTCACGGTGCTCTCCGATCTCCCGATGATCTGTTCCTGGATGAGCAGGAAGTTAATACGACTGGGTTTCTCGGTATCTTCGCTGGCGCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGGCGCCGCTCCTTCCGGCAGATAA ATGATTGTGCTGAAGGGATCGGTACCCATGTCATTTGGGGGCAGTGAGCAGCCAGCAGCATATGGTGAGTTGGTGTCCATCGGTGGTCTGAACCCTGATGTCAACAAGAAATTGAGTGCTGCAATTTCTGCAATCCTGGAGACCAAGCTATCTGTTCCCAAGTCAAGATTCTTTCTCAAATTCTACGACACCAAGGCAAGCCCATCAGAGTCAAGAATATGCACAGTGTTTACATGCTTTACACCAGAACTAGAGATCATGGTTCCAACTTGGGATGGAATGGCTCCACTTTCTAAGTTAACTTCATCTTCCTCAGCTTCTCCGGTCATCCTCCCCATTTCCAATCCCCAATCCCAACCTCAAATCCCCCTTTCTTCCTTCTCTAGCCATCTCCTCCTCTCCCTCCGCCACGCCTTCTCCCGTCGCCGCCCTTGGCCGGAGCTCCTAGATCGCTCCGCCTTCTCCAAGCCTGAATCCCTCTCCGAAGCCACTCTCCGCATCCGCAAGAACTACTCCTATTTCCGCGTCAATTATTTCACCATCATAGCCCTAATTCTTGCCATTTCACTTTTCTCCAATCCTTCCTCTCTCTTCCTCTTGATCGCCCTTCTTTGCTCTTGGATCTTCCTCTATCTCTTCCGCCCCTCCGATCAGCCGCTTGTTCTGTTTGGTCGCCACTTCAGAGATAGCGAGATCTTGATTGGTCTCGTTGTTTTCACCGCCTGTGTTGTTTTTCTCACCAGCGTTGGATCTGTTCTTGTTTCTGCTTTCACCGCCGGTTTCGCCGTCGTCTGCGCTCACGGTGCTCTCCGATCTCCCGATGATCTGTTCCTGGATGAGCAGGAAGTTAATACGACTGGGTTTCTCGGTATCTTCGCTGGCGCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGGCGCCGCTCCTTCCGGCAGATAA MIVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAISAILETKLSVPKSRFFLKFYDTKASPSESRICTVFTCFTPELEIMVPTWDGMAPLSKLTSSSSASPVILPISNPQSQPQIPLSSFSSHLLLSLRHAFSRRRPWPELLDRSAFSKPESLSEATLRIRKNYSYFRVNYFTIIALILAISLFSNPSSLFLLIALLCSWIFLYLFRPSDQPLVLFGRHFRDSEILIGLVVFTACVVFLTSVGSVLVSAFTAGFAVVCAHGALRSPDDLFLDEQEVNTTGFLGIFAGAPSSSSSSSSSSGAAPSGR* Homology
BLAST of CsaV3_4G026750 vs. NCBI nr
Match: KAE8649576.1 (hypothetical protein Csa_021551 [Cucumis sativus]) HSP 1 Score: 589.7 bits (1519), Expect = 1.5e-164 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. NCBI nr
Match: XP_004148598.2 (PRA1 family protein B2 [Cucumis sativus]) HSP 1 Score: 389.4 bits (999), Expect = 2.9e-104 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. NCBI nr
Match: XP_008464234.1 (PREDICTED: PRA1 family protein B2 [Cucumis melo] >KAA0037713.1 PRA1 family protein B2 [Cucumis melo var. makuwa] >TYK10948.1 PRA1 family protein B2 [Cucumis melo var. makuwa]) HSP 1 Score: 349.4 bits (895), Expect = 3.3e-92 Identity = 187/202 (92.57%), Postives = 193/202 (95.54%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. NCBI nr
Match: XP_023544736.1 (PRA1 family protein B2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 336.3 bits (861), Expect = 2.9e-88 Identity = 177/204 (86.76%), Postives = 193/204 (94.61%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. NCBI nr
Match: XP_022949813.1 (PRA1 family protein B2-like [Cucurbita moschata] >KAG6603559.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033749.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 335.5 bits (859), Expect = 5.0e-88 Identity = 180/208 (86.54%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy Swiss-Prot
Match: O80915 (PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 5.4e-53 Identity = 113/211 (53.55%), Postives = 147/211 (69.67%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 5.9e-52 Identity = 116/210 (55.24%), Postives = 154/210 (73.33%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.5e-50 Identity = 119/216 (55.09%), Postives = 154/216 (71.30%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy Swiss-Prot
Match: Q9LYN0 (PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 7.3e-50 Identity = 117/214 (54.67%), Postives = 146/214 (68.22%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy Swiss-Prot
Match: Q9M012 (PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 8.0e-49 Identity = 116/223 (52.02%), Postives = 152/223 (68.16%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy TrEMBL
Match: A0A0A0KXP8 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G314420 PE=3 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 1.4e-104 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy TrEMBL
Match: A0A5D3CIC6 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00310 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.6e-92 Identity = 187/202 (92.57%), Postives = 193/202 (95.54%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy TrEMBL
Match: A0A1S3CMI9 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103502166 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.6e-92 Identity = 187/202 (92.57%), Postives = 193/202 (95.54%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy TrEMBL
Match: A0A6J1GD57 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111453097 PE=3 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 2.4e-88 Identity = 180/208 (86.54%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. ExPASy TrEMBL
Match: A0A6J1IPN2 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111478318 PE=3 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.6e-87 Identity = 174/201 (86.57%), Postives = 190/201 (94.53%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. TAIR 10
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4 ) HSP 1 Score: 209.5 bits (532), Expect = 3.8e-54 Identity = 113/211 (53.55%), Postives = 147/211 (69.67%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 ) HSP 1 Score: 206.1 bits (523), Expect = 4.2e-53 Identity = 116/210 (55.24%), Postives = 154/210 (73.33%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 ) HSP 1 Score: 201.4 bits (511), Expect = 1.0e-51 Identity = 119/216 (55.09%), Postives = 154/216 (71.30%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. TAIR 10
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1 ) HSP 1 Score: 199.1 bits (505), Expect = 5.2e-51 Identity = 117/214 (54.67%), Postives = 146/214 (68.22%), Query Frame = 0
BLAST of CsaV3_4G026750 vs. TAIR 10
Match: AT3G56110.2 (prenylated RAB acceptor 1.B1 ) HSP 1 Score: 199.1 bits (505), Expect = 5.2e-51 Identity = 117/214 (54.67%), Postives = 146/214 (68.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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