CsaV3_4G026380 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGCAAAGTTGTTGAAAGGGGTTCTTAGCCACCAGTTGAAGCAATTTGTGATTGATGGAAACAAGGTTATTCTTAGTGTTTCGAATCCAGAAACAAGAGTCGATGATGCCGAGTTTGAAGAGAATGAAATTTATGCAATAGACATAGTTACAAGTACGGGTGAAGGCAAGGTAATAAGGCCTTTAAGCTGAATAACCACTGTGACTTGATTAATTCTTTTTTTTCTAAATCATTCAATACCAATTGTTTTTGAACAATGCAGCCTAAGTTGTTGGATGAGAAGCAGACGACTATATATAAGAGAGCTATGGACAAGAGCTATCACTTGAAGATGAAAGCATGTAGGTTATTTTCAGTGAAATAAGTAAGAAATTTCCTGTTCTGCCTTTCACTGCTAGGTTGGTTGTGTTTCGACAATGAATTTTTTCGGGAGGCATTTGCTTGCAATTCTGAGGCACAGGTTTAGCAACTTAATAGGGCTTTGGAAGAGAAAAGAGCTAGGCTGGGACTAGTCGAATGTGTCAATCGTGATCTATTACAACCGTATCCCATCCTCCATGTGTTAATTGTGATCTATTGCAACCAAGTTTTCTGGATGAATTTCAGGTAAGAAAGGCGACAACAAACTCAACAATTCAACAGAGGTTGAGCCAATGGATTCGACAAGAACTGTGGGTGCATCACAGGAATGA ATGATTGCAAAGTTGTTGAAAGGGGTTCTTAGCCACCAGTTGAAGCAATTTGTGATTGATGGAAACAAGGTTATTCTTAGTGTTTCGAATCCAGAAACAAGAGTCGATGATGCCGAGTTTGAAGAGAATGAAATTTATGCAATAGACATAGTTACAAGTACGGGTGAAGGCAAGCCTAAGTTGTTGGATGAGAAGCAGACGACTATATATAAGAGAGCTATGGACAAGAGCTATCACTTGAAGATGAAAGCATGTAAGAAAGGCGACAACAAACTCAACAATTCAACAGAGGTTGAGCCAATGGATTCGACAAGAACTGTGGGTGCATCACAGGAATGA ATGATTGCAAAGTTGTTGAAAGGGGTTCTTAGCCACCAGTTGAAGCAATTTGTGATTGATGGAAACAAGGTTATTCTTAGTGTTTCGAATCCAGAAACAAGAGTCGATGATGCCGAGTTTGAAGAGAATGAAATTTATGCAATAGACATAGTTACAAGTACGGGTGAAGGCAAGCCTAAGTTGTTGGATGAGAAGCAGACGACTATATATAAGAGAGCTATGGACAAGAGCTATCACTTGAAGATGAAAGCATGTAAGAAAGGCGACAACAAACTCAACAATTCAACAGAGGTTGAGCCAATGGATTCGACAAGAACTGTGGGTGCATCACAGGAATGA MIAKLLKGVLSHQLKQFVIDGNKVILSVSNPETRVDDAEFEENEIYAIDIVTSTGEGKPKLLDEKQTTIYKRAMDKSYHLKMKACKKGDNKLNNSTEVEPMDSTRTVGASQE* Homology
BLAST of CsaV3_4G026380 vs. NCBI nr
Match: KGN54653.2 (hypothetical protein Csa_017875 [Cucumis sativus]) HSP 1 Score: 219.5 bits (558), Expect = 1.4e-53 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. NCBI nr
Match: XP_031739584.1 (LOW QUALITY PROTEIN: ERBB-3 BINDING PROTEIN 1 [Cucumis sativus]) HSP 1 Score: 160.2 bits (404), Expect = 1.0e-35 Identity = 82/104 (78.85%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. NCBI nr
Match: XP_010937887.1 (ERBB-3 BINDING PROTEIN 1 [Elaeis guineensis]) HSP 1 Score: 154.5 bits (389), Expect = 5.6e-34 Identity = 77/97 (79.38%), Postives = 88/97 (90.72%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. NCBI nr
Match: XP_020108097.1 (ERBB-3 BINDING PROTEIN 1 [Ananas comosus] >XP_020108098.1 ERBB-3 BINDING PROTEIN 1 [Ananas comosus] >OAY74335.1 ERBB-3 binding protein 1 [Ananas comosus]) HSP 1 Score: 154.5 bits (389), Expect = 5.6e-34 Identity = 77/100 (77.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. NCBI nr
Match: XP_023760217.1 (ERBB-3 BINDING PROTEIN 1 isoform X1 [Lactuca sativa]) HSP 1 Score: 154.1 bits (388), Expect = 7.4e-34 Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy Swiss-Prot
Match: M1CZC0 (ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum OX=4113 GN=EBP1 PE=2 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 3.4e-34 Identity = 69/83 (83.13%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy Swiss-Prot
Match: Q96327 (ERBB-3 BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=EBP1 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.3e-28 Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy Swiss-Prot
Match: Q1ZXG4 (Proliferation-associated protein A OS=Dictyostelium discoideum OX=44689 GN=prlA PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.2e-16 Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy Swiss-Prot
Match: Q9UQ80 (Proliferation-associated protein 2G4 OS=Homo sapiens OX=9606 GN=PA2G4 PE=1 SV=3) HSP 1 Score: 75.5 bits (184), Expect = 4.4e-13 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy Swiss-Prot
Match: P50580 (Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=3) HSP 1 Score: 75.5 bits (184), Expect = 4.4e-13 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy TrEMBL
Match: A0A0A0KXL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312230 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38 Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy TrEMBL
Match: A0A199VC08 (erbB-3 binding protein 1 OS=Ananas comosus OX=4615 GN=LOC109723960 PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.7e-34 Identity = 77/100 (77.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy TrEMBL
Match: A0A6I9S6A2 (ERBB-3 BINDING PROTEIN 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105057115 PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.7e-34 Identity = 77/97 (79.38%), Postives = 88/97 (90.72%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy TrEMBL
Match: A0A6S7PZ69 (Peptidase_M24 domain-containing protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS37403 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.6e-34 Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. ExPASy TrEMBL
Match: A0A2J6LLN9 (Peptidase_M24 domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_8X101001 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.6e-34 Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. TAIR 10
Match: AT3G51800.1 (metallopeptidase M24 family protein ) HSP 1 Score: 127.1 bits (318), Expect = 9.0e-30 Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. TAIR 10
Match: AT3G51800.2 (metallopeptidase M24 family protein ) HSP 1 Score: 127.1 bits (318), Expect = 9.0e-30 Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of CsaV3_4G026380 vs. TAIR 10
Match: AT3G51800.3 (metallopeptidase M24 family protein ) HSP 1 Score: 127.1 bits (318), Expect = 9.0e-30 Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|