CsaV3_4G024920 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G024920
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr4: 14612398 .. 14613830 (-)
RNA-Seq Expression	CsaV3_4G024920
Synteny	CsaV3_4G024920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATTCTAATTTGGATTTGGGTAATTGGATATCTCACTGTGCTGTAGCTTAATTAATTGACAGGGAATAGACGTTTCCCTGGGCCTCCTGCCTAGTCTGTGGGTCTGTGGTGTCACTGCAGTACGAAATTAGTCTCATCAAGGCCTTTTCTATCATCTCTTTTGCCTTGCCAATCAGAAAATGGTCACAAGAAATGGCAAGTCCTCTTTCCCTCTAAATGCTTATAGATTGTTGTGCATATACCTGTCTGTTCTCTAATGATTTGAATTCAATGTTTTTCATTCATGAACCTCCTCTTCTGCAGCCACCTCCTTTGACCTGACGTTTCTTAGTATATCAAATCAACCACCACAGTCTCAGCCAGTGATGGCTCAACAGGACGATGGATGGCCTTTGGGATTAAGAATGCTAAATGCTAGAGTTGGATTGCTGGAAAATCGGGACTTTCCTGGATCAATTTCCTTCAACACTTTACCTACTGGATCTCCCATCTCCTTCACTGACTCTTCGGTTCTTGACTCTGAGGTAATGTTTCACTTTTTTTTTTTTGCCTCAATTCTTTTTTTAGTACATCTGGGGATAGGATCGGACCTTCAACCACGAGGGAGCAAAGTGGTGTCAATTATCTTTTGCTTTTTCCCTTCAAATTCTGTGCTTCAATTCCCCTTTGTTTCTGATTGGATTACAGTCAAGCGGGTCATTCTTCCATTCTAAAAGCATCACTCTGGGTAGCCTAATCGGTGGTTCTACTTCTAACATCATGGAACTCACAAGAAGACCGTCAAGAGAAGGTAGCACAGAAGCCAGCCTAGGAGTTGACAGAAAGATCAATAACTACTTCAAGTTGAAGTCCAAGCCATGGCTGTTTTCCCTGTGCTGCAAACTGAGCACCGATGCCGTGATCGCCACTAGAACTCACTCGCTGGCTCACTTTCTAGAATTGGAGAGGAAACGAACTGCCACCGTAGCTGCCGCCCACCCTCGGCCAATTGTCGGAAGATCCAGCAATATTTTAACCAGTTGAAACACTGTTTTCATTAGTCAATGGCAAAGAGCAAATAGGAAGAGGCCAAGGAGAGTGGTTAATCGGTGGGGAAAATGGGAATGGGGTTCTTTGATGTTGTTTTCATCCTCTGCCTTCAGACAAAATTATTAGGCTGCCATTCATAATACCGTTAAATGTGCCAGTAGTGAGATGCTTTTCTGGGTCTTCATCAACTGTTTTGAGATCTGACTCTGATCTCTTAAATCAGGTACTCAACAACCCCTTACTTTAAAATTGTTTGTTACATCTCTTGTTTTTGCATATTAATTACTCGTTTGAGTTTTACTTTCTTGCCTCTGTTCATTTCAATTTGAAAACGGAAAGTAATTTCAATGAAACGAAACTTATGTTGATATTTCTAATGTTTCTTTCCGAAATTTGTTTAAC

mRNA sequence

ATGGTCACAAGAAATGCCACCTCCTTTGACCTGACGTTTCTTAGTATATCAAATCAACCACCACAGTCTCAGCCAGTGATGGCTCAACAGGACGATGGATGGCCTTTGGGATTAAGAATGCTAAATGCTAGAGTTGGATTGCTGGAAAATCGGGACTTTCCTGGATCAATTTCCTTCAACACTTTACCTACTGGATCTCCCATCTCCTTCACTGACTCTTCGGTTCTTGACTCTGAGTCAAGCGGGTCATTCTTCCATTCTAAAAGCATCACTCTGGGTAGCCTAATCGGTGGTTCTACTTCTAACATCATGGAACTCACAAGAAGACCGTCAAGAGAAGGTAGCACAGAAGCCAGCCTAGGAGTTGACAGAAAGATCAATAACTACTTCAAGTTGAAGTCCAAGCCATGGCTGTTTTCCCTGTGCTGCAAACTGAGCACCGATGCCGTGATCGCCACTAGAACTCACTCGCTGGCTCACTTTCTAGAATTGGAGAGGAAACGAACTGCCACCGTAGCTGCCGCCCACCCTCGGCCAATTGTCGGAAGATCCAGCAATATTTTAACCAGTTGA

Coding sequence (CDS)

ATGGTCACAAGAAATGCCACCTCCTTTGACCTGACGTTTCTTAGTATATCAAATCAACCACCACAGTCTCAGCCAGTGATGGCTCAACAGGACGATGGATGGCCTTTGGGATTAAGAATGCTAAATGCTAGAGTTGGATTGCTGGAAAATCGGGACTTTCCTGGATCAATTTCCTTCAACACTTTACCTACTGGATCTCCCATCTCCTTCACTGACTCTTCGGTTCTTGACTCTGAGTCAAGCGGGTCATTCTTCCATTCTAAAAGCATCACTCTGGGTAGCCTAATCGGTGGTTCTACTTCTAACATCATGGAACTCACAAGAAGACCGTCAAGAGAAGGTAGCACAGAAGCCAGCCTAGGAGTTGACAGAAAGATCAATAACTACTTCAAGTTGAAGTCCAAGCCATGGCTGTTTTCCCTGTGCTGCAAACTGAGCACCGATGCCGTGATCGCCACTAGAACTCACTCGCTGGCTCACTTTCTAGAATTGGAGAGGAAACGAACTGCCACCGTAGCTGCCGCCCACCCTCGGCCAATTGTCGGAAGATCCAGCAATATTTTAACCAGTTGA

Protein sequence

MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS*

Homology

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BLAST of CsaV3_4G024920 vs. NCBI nr
Match: XP_004142071.2 (uncharacterized protein LOC101214483 [Cucumis sativus] >KAE8649527.1 hypothetical protein Csa_018070 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 1.3e-99
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60
           MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN
Sbjct: 1   MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60

Query: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL 120
           TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL
Sbjct: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL 120

Query: 121 GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI 180
           GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI
Sbjct: 121 GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI 180

Query: 181 VGRSSNILTS 191
           VGRSSNILTS
Sbjct: 181 VGRSSNILTS 190

[Close]

BLAST of CsaV3_4G024920 vs. NCBI nr
Match: XP_016900475.1 (PREDICTED: uncharacterized protein LOC103490160 isoform X1 [Cucumis melo] >XP_016900477.1 PREDICTED: uncharacterized protein LOC103490160 isoform X1 [Cucumis melo])

HSP 1 Score: 351.7 bits (901), Expect = 4.1e-93
Identity = 179/190 (94.21%), Postives = 184/190 (96.84%), Query Frame = 0


Query: 1   MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60
           M+TRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN
Sbjct: 1   MLTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60

Query: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL 120
           TLPTGSPISFTDSSVLDSESSGSFFHSKS TLGSL+GGSTSNIMEL+RR SREGSTEASL
Sbjct: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSTTLGSLLGGSTSNIMELSRRSSREGSTEASL 120

Query: 121 GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI 180
           GVDRKINNYFK KSK WLFSLCCKLSTDAVIATRTHSLAHFLELERKRTAT AAAHPRPI
Sbjct: 121 GVDRKINNYFKFKSKQWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATGAAAHPRPI 180

Query: 181 VGRSSNILTS 191
           VGRS++ LTS
Sbjct: 181 VGRSNDNLTS 190

[Close]

BLAST of CsaV3_4G024920 vs. NCBI nr
Match: KAA0032638.1 (uncharacterized protein E6C27_scaffold184G00230 [Cucumis melo var. makuwa] >TYK23518.1 uncharacterized protein E5676_scaffold500G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 342.0 bits (876), Expect = 3.2e-90
Identity = 174/190 (91.58%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60
           ++    TSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN
Sbjct: 49  LILWQTTSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 108

Query: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL 120
           TLPTGSPISFTDSSVLDSESSGSFFHSKS TLGSL+GGSTSNIMEL+RR SREGSTEASL
Sbjct: 109 TLPTGSPISFTDSSVLDSESSGSFFHSKSTTLGSLLGGSTSNIMELSRRSSREGSTEASL 168

Query: 121 GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI 180
           GVDRKINNYFK KSK WLFSLCCKLSTDAVIATRTHSLAHFLELERKRTAT AAAHPRPI
Sbjct: 169 GVDRKINNYFKFKSKQWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATGAAAHPRPI 228

Query: 181 VGRSSNILTS 191
           VGRS++ LTS
Sbjct: 229 VGRSNDNLTS 238

[Close]

BLAST of CsaV3_4G024920 vs. NCBI nr
Match: XP_038877635.1 (uncharacterized protein LOC120069886 [Benincasa hispida])

HSP 1 Score: 308.9 bits (790), Expect = 3.0e-80
Identity = 156/180 (86.67%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 11  LTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISF 70
           LTFLSISNQPP+SQ VMAQQDDGWPLGLR+LNARVGLLENRDFPGSISFNTLPTGSPISF
Sbjct: 5   LTFLSISNQPPESQLVMAQQDDGWPLGLRLLNARVGLLENRDFPGSISFNTLPTGSPISF 64

Query: 71  TDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYF 130
           TDSS LDSESSGSFFH+KSITLGSLIGGST  IMEL+RR SR GSTEASLG+DRKINNYF
Sbjct: 65  TDSSDLDSESSGSFFHAKSITLGSLIGGSTPRIMELSRRSSRGGSTEASLGLDRKINNYF 124

Query: 131 KLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS 190
           K KSKPWLFSLCCKLSTDAVIATRT SLAHFLE+ER+RTA  AA+HP PI  R++N+LTS
Sbjct: 125 KFKSKPWLFSLCCKLSTDAVIATRTRSLAHFLEVERRRTAAAAASHPPPIAERTNNMLTS 184

[Close]

BLAST of CsaV3_4G024920 vs. NCBI nr
Match: KAG6595318.1 (hypothetical protein SDJN03_11871, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226.9 bits (577), Expect = 1.5e-55
Identity = 132/192 (68.75%), Postives = 146/192 (76.04%), Query Frame = 0


Query: 15  SISNQPPQSQP-------VMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSP 74
           SISNQPP+SQP       +MAQQDDGWPLGLR+LNARVGLLENRDF GSISFNTLPTGSP
Sbjct: 262 SISNQPPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSISFNTLPTGSP 321

Query: 75  ISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKIN 134
           ISFTDSS LDS+SSGSF H+KSI+ GSLI G  S+I+EL+RR SR GSTE SLG  RK N
Sbjct: 322 ISFTDSSDLDSQSSGSFLHAKSISGGSLISG--SDIVELSRRSSRGGSTETSLGGYRK-N 381

Query: 135 NYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTA---------TVAAAHPR 191
           ++   KSKPWLFSLCCKLSTDAV  TRTHSLAHFLE ER+RTA          +    PR
Sbjct: 382 DF---KSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPR 441

[Close]

BLAST of CsaV3_4G024920 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.1e-04
Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 62  LPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLG 121
           +P+   IS   SS LD+ES+GSFFH +SITLG+L+G S +  M +  R S       S+ 
Sbjct: 6   VPSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVA 65

Query: 122 VDR 125
           + R
Sbjct: 66  ISR 68

[Close]

BLAST of CsaV3_4G024920 vs. ExPASy TrEMBL
Match: A0A1S4DWX0 (uncharacterized protein LOC103490160 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490160 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.0e-93
Identity = 179/190 (94.21%), Postives = 184/190 (96.84%), Query Frame = 0


Query: 1   MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60
           M+TRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN
Sbjct: 1   MLTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60

Query: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL 120
           TLPTGSPISFTDSSVLDSESSGSFFHSKS TLGSL+GGSTSNIMEL+RR SREGSTEASL
Sbjct: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSTTLGSLLGGSTSNIMELSRRSSREGSTEASL 120

Query: 121 GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI 180
           GVDRKINNYFK KSK WLFSLCCKLSTDAVIATRTHSLAHFLELERKRTAT AAAHPRPI
Sbjct: 121 GVDRKINNYFKFKSKQWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATGAAAHPRPI 180

Query: 181 VGRSSNILTS 191
           VGRS++ LTS
Sbjct: 181 VGRSNDNLTS 190

[Close]

BLAST of CsaV3_4G024920 vs. ExPASy TrEMBL
Match: A0A5D3DJ71 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00220 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-90
Identity = 174/190 (91.58%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MVTRNATSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 60
           ++    TSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN
Sbjct: 49  LILWQTTSFDLTFLSISNQPPQSQPVMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFN 108

Query: 61  TLPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASL 120
           TLPTGSPISFTDSSVLDSESSGSFFHSKS TLGSL+GGSTSNIMEL+RR SREGSTEASL
Sbjct: 109 TLPTGSPISFTDSSVLDSESSGSFFHSKSTTLGSLLGGSTSNIMELSRRSSREGSTEASL 168

Query: 121 GVDRKINNYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATVAAAHPRPI 180
           GVDRKINNYFK KSK WLFSLCCKLSTDAVIATRTHSLAHFLELERKRTAT AAAHPRPI
Sbjct: 169 GVDRKINNYFKFKSKQWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTATGAAAHPRPI 228

Query: 181 VGRSSNILTS 191
           VGRS++ LTS
Sbjct: 229 VGRSNDNLTS 238

[Close]

BLAST of CsaV3_4G024920 vs. ExPASy TrEMBL
Match: A0A0A0KX74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295490 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.8e-85
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 27  MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFH 86
           MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFH
Sbjct: 1   MAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPISFTDSSVLDSESSGSFFH 60

Query: 87  SKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLS 146
           SKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLS
Sbjct: 61  SKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPWLFSLCCKLS 120

Query: 147 TDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS 191
           TDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS
Sbjct: 121 TDAVIATRTHSLAHFLELERKRTATVAAAHPRPIVGRSSNILTS 164

[Close]

BLAST of CsaV3_4G024920 vs. ExPASy TrEMBL
Match: A0A6J1HEB8 (uncharacterized protein LOC111463409 OS=Cucurbita moschata OX=3662 GN=LOC111463409 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-54
Identity = 130/192 (67.71%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 15  SISNQPPQSQP-------VMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSP 74
           SIS+QPP+SQP       +MAQQDDGWPLGLR+LNARVGLLENRDF GSISFNTLPTGSP
Sbjct: 37  SISDQPPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSISFNTLPTGSP 96

Query: 75  ISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKIN 134
           ISF DSS LDS+SSGSF H+KSI+ GSLI G  S+I+EL+RR SR GSTE SLG  RK N
Sbjct: 97  ISFADSSDLDSQSSGSFLHAKSISGGSLISG--SDIVELSRRSSRGGSTETSLGGYRK-N 156

Query: 135 NYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTA---------TVAAAHPR 191
           ++   KSKPWLFSLCCKLSTDAV  TRTHSLAHFLE ER+RTA          +    PR
Sbjct: 157 DF---KSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMMQGRPR 216

[Close]

BLAST of CsaV3_4G024920 vs. ExPASy TrEMBL
Match: A0A6J1I9M4 (uncharacterized protein LOC111471292 OS=Cucurbita maxima OX=3661 GN=LOC111471292 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.1e-54
Identity = 123/163 (75.46%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 15  SISNQPPQSQP-------VMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSP 74
           SISN PP+SQP       +MAQQDDGWPLGLR+LNARVGLLENRDF GSISFNTLPTGSP
Sbjct: 37  SISNHPPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSISFNTLPTGSP 96

Query: 75  ISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKIN 134
           ISFTDSS LDS+SSGSFFH+KSI+  SLI G  S I+EL+ R SR GSTE SLG  RK N
Sbjct: 97  ISFTDSSDLDSQSSGSFFHAKSISGASLISG--SGIVELSSRSSRVGSTETSLGGYRK-N 156

Query: 135 NYFKLKSKPWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTA 171
           ++   KSKPWLFSLCCKLSTDAV  TRTHSLAHFLE ER+RTA
Sbjct: 157 DF---KSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTA 193

[Close]

BLAST of CsaV3_4G024920 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 3.6e-23
Identity = 68/175 (38.86%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 27  MAQQDDGWPLGLRMLNARVGLL---------ENRDFPGSISFNTLPTGSPISFTDSSVLD 86
           MA Q++GWPLGLR +NAR+G L           +   GSISF++L + SP S   SS LD
Sbjct: 1   MAHQEEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSP-SSQSSSDLD 60

Query: 87  SESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLGVDRKINNYFKLKSKPW 146
           S+S GSFF  +S TLG+LIG   S+ +EL+RR +R  + +     + + +   K   KPW
Sbjct: 61  SQSMGSFFRDRSYTLGNLIG--ISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPW 120

Query: 147 LFSLCCKLSTDAVIAT-------------RTHSLAHFLELERKRTATVAAAHPRP 180
           +FS+C KLST+A + +                SL HFL +ER+   +   + P P
Sbjct: 121 IFSICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTIRSTPTP 172

[Close]

BLAST of CsaV3_4G024920 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.5e-05
Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 62  LPTGSPISFTDSSVLDSESSGSFFHSKSITLGSLIGGSTSNIMELTRRPSREGSTEASLG 121
           +P+   IS   SS LD+ES+GSFFH +SITLG+L+G S +  M +  R S       S+ 
Sbjct: 6   VPSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVA 65

Query: 122 VDR 125
           + R
Sbjct: 66  ISR 68

The following BLAST results are available for this feature:

BLAST of CsaV3_4G024920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142071.2	1.3e-99	100.00	uncharacterized protein LOC101214483 [Cucumis sativus] >KAE8649527.1 hypothetica...	[more]
XP_016900475.1	4.1e-93	94.21	PREDICTED: uncharacterized protein LOC103490160 isoform X1 [Cucumis melo] >XP_01...	[more]
KAA0032638.1	3.2e-90	91.58	uncharacterized protein E6C27_scaffold184G00230 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_038877635.1	3.0e-80	86.67	uncharacterized protein LOC120069886 [Benincasa hispida]	[more]
KAG6595318.1	1.5e-55	68.75	hypothetical protein SDJN03_11871, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_4G024920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DR24	2.1e-04	42.86	Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV...	[more]

BLAST of CsaV3_4G024920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWX0	2.0e-93	94.21	uncharacterized protein LOC103490160 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DJ71	1.6e-90	91.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KX74	9.8e-85	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295490 PE=4 SV=1	[more]
A0A6J1HEB8	1.1e-54	67.71	uncharacterized protein LOC111463409 OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]
A0A6J1I9M4	3.1e-54	75.46	uncharacterized protein LOC111471292 OS=Cucurbita maxima OX=3661 GN=LOC111471292...	[more]

BLAST of CsaV3_4G024920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02440.1	3.6e-23	38.86	unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bac...	[more]
AT3G17950.1	1.5e-05	42.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33544:SF3	60S RIBOSOMAL PROTEIN L36	coord: 27..173
IPR040344	Uncharacterized protein At3g17950-like	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 27..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G024920.1	CsaV3_4G024920.1	mRNA