CsaV3_4G024510 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAATAAAAGTCAAACTTACAAACATCATTCAAACGAGACATAATCCAATACAGCAGTTCCATAGTAGGACCGACCAATCGACGGCAGATAGCATTCCGTTATTGCTCCAAATCATAGCCTTCTAGATTACGCCACGCCACCACCCTCACCTAATGACGTGGACATCTCAACACGTGGCACAAATCTGGCTCGTTATCACTTATTGGTTGGTGTAAGCGTGTCACAGACACAAAATCCCCCAGTTCTTCCACAACCCCACAGGTCCATTCGCACGCAAAGGAGCCAAATCGCCATAACCTCGAACCTTCCGTATCATTGAATCAGAGTTTTAAAACTTCCGCCGTCGGCCACCGCCTTATCTCACCGCCTTTCTCTTCGATCTCGTCGTTCCGACAACGCACCGAAAATTACAATTAGGGTTTTCAGAAAATTTTGATTCGCGATATGCCGATTCGGTGTACTCTGAATTTCAGAGTGTCAGCATTTTTTCTTCTTGTTTCGACATTCCTGAGTTGCCATTCAGGTAAAGTTTGTTCCAAATAGATATAAAATTGTGGTTTATTTGTTTCTGTTATTGCTTCGATTTGGTTTTTGTGTTTGTTGTTATTTGCAATTTTGAAGTTGGGGATTGAATATTGGAATGATTTCAGAGGGTGCAGAATCGGCTGTTGTTACGCTTGATTCCATTGTAATATACAAGACGCACGAGTGGTTAGCCGCGAAACCGACTGTTTATTTTCATTGTCAAGGGGGAAATAGGACGACATTGCCTGATGTACAGAAAGAGCATGTTTTATATAGCTTCAATGGTGAAGAATCATGGCAGGTTTGTGGTATTTCAATGAGTTCGTTGTGAACAGTTTTTTAGCTTCCCCAAGCTTTTCTTCTTTTCCTGTCAACTTTATTTGGTGTTCTAATTTCACTTGAACGAGCTAGGGTATGTTTAGGAGTTGGTCATTTTTCTGGAGCTCAAAATTATGCCGTTGTATCATTCAAAATCAATTTAATGTTTGATATTACATCAGCATTCAATTTGATTTTGAATAATTCATAGCATATTTTAAATTGTTTTATCCAGAGAAGAAAAGCACGTTTTAGAGTTTTGTAGTGATTTTAAGCATGGATAAATTGACTTGGACCAATTACTTAGGGCACGTTTGAAAATGATTTATACTTTTATTAGATTTAAATTTAAAATTACTTCCAAACAGACTTTACAACCATTTCAAAATCACTTTCAAACATGCCTAAAGAACAAAAAACCTTGTGGAACCAGATTGTCCTGTTTGCTTCTAATTATGTAATGATTGAAGTTCTTCACACAAATTGGATTATAGCATAGCTATAGAACAGGAGTCGATGTTTCAGTGAAAACAAAGACGTTTTGGACTCTTTGTGTAGAAAAAAACTTGATCAAAGTATTGAGGGCGAGGAATTATGTTCTGGTGTCTCTATGGAGAGATAAAAGGGGATTGCATACAACATACACACTAACAAATGGCAATATTTACCATTATTGATTTGGTTCCAATATTGAAATACTATCTCTGTGTTTTCAGCCATTGACTGAATTTAAAAGCAAAAAGTGTAAGCGATGTGGGTTCTATGAAGAGGACAGTATTAAATCTGATGATGTATTTGAAGAATGGGAGTTTTGTCCATCTGATTTTACAGCTCCTGCTGGAAAATATGTACGATTCAATCCAAAAGAGTTCAATGCCACTTTTCTATGCTTGAAGTGCACAGCATATTCCAATGGTGAGTTGTAATATACTATAGTTTACTACCCTGCGCTTAGATGAATTAATATTGCACGCCATACAACGAATTAAGAGCCTGTGTAGATTGCCTTTCTAATCATATAGAAAAATAATTCCAAGTGCTTAAGAGCATGTTTGATATTACCATCATACAGCATATTCCAATGTGTTGAAATTGACTTTCTAAGTCTGCCAATCTAAACATTGGCCCTAAGTGGAGATTTCAACTGCTTATGATCTGAGAATTTGGTGAGTTATAAAGTTCTGAAGAAATTTGTTCCCTTCTAAACTGATGATCATATTTCCTTCATCTACTAATGATGTTCCTCCTGGCATTTACATACTTCTACATTTTGAAATGTCAACAGCAAATCCCCTTGCTCGTTTGCTATCTTGGATATTTGAGTTGTTTTACATGGATGTAAACGTAGCTCTGTTGTTTTTAGAAACCTTCAAATTCTGCACCTCTTGTTTTCTTTTAATTTTGCCTCTTTTACTTAGATTAGATTAGATTAGATTAATGCAACTATATAATTCACAATTTCGGAGGGAACACGCAGAGAATATTTAGTCTTGTGCTTACTGCTTCTTTAATTATTTTGGACGAATTTGTGACTGTGGCTCTACCGACCTGTCCATGTGTTCTTTTCCAAAATTGGTTACTTGATTATTGCAGTTACCAGTACAAGTTCCAGTACAAGTTCGATTACGGATGGGGGAGAAAAGGGAATGCAGTCTGCTATAATCATAGTCATCAGTATAGTGGCTTCCGTCGTGTTGATTATTGGTATGGTGGTTGGTTACAAATATTGGCAAAAAAAGAGAAGACAGCAAGATCAAGCCAGGTTTCTAAAGCTTTTTGAAGATGGGGATGACATTGAAGATGAATTGGGCCTTAGCGATGTAATTTGAGAGTTGGTATACTAAAAGAAAAAGATACGAATGTACAGAAACACTCTTTTATGTTATTATTATTATTCTTTTCAAACACATTCAAATAGAAAAATTCAAACAGTTGGCCTCTTCGTTAGAGGCATTAACAACACATTTTGTGTAATCTTTCAGTTACCTTTGGGATAGAATAGAAATAACATCATAAAGTTTCTGCATTATTCTTCTAATCAATGTCTGGATTTTGTATACTTTGATATAATAAAATCGGGAAAACTTGTTATTATTTCTGGTAAAAGAACATTTGAAAAGAAATAAAGAACTCTGATTACATTGCATTCTTGATGAAAAGTAAAAAATGATATGGCAGTGTCAATACCCAAGGATGGCTTCTAGGAGTGCCAAAGCATCTGATCTGCAGTCATTTTCAGGTGTCAATTCTTGCCCATTACGTTCCTGACCTTGCTCATCTTCCCCAATTCCAAACCAAAACCGAAGGCAATCCCAAGAAAATTCATAGTACAAGTTTCTAGAATCACCATTATAATCCTCAAGTTGATTCTCATTCTGGTAAAGAATGAGTTCTGTTGTACTCTCGTTTATGCAACCATTTTGATTGCCATAAAGGTATTCGCAATTGAAGAAGAGATCGGTGGGGTTGACTTCATTCGACGACCATCCATAACAACTGTGGTAAGCCTGTTCACTCTCAGGGTTGTCTCCAATTGGGTCTCCATCAGACTGGTGTTGGCTCATGAAACCGAACTCCGGTATGTCATAGCCGTTTGCATTTAGCATGAGCAGCCCAATGGAGTCGGAGCCATTGTAAATCATATCTGACATTCAAAGCTCTGACAAGGCCACACTATGACAATGGGTATGCTCTTAGATTACCTGTTATATATAAACTTGGAAAGGAGAAAAAAGAGAACCATATTTGTAGTGGATTCCATTCTAATCTAAAAAAACATATTCTCTTCAAAATCACTATATAAGCTATTCTATATATAGATTCTGGTATATGGAAACTTACAAGATATTCAACACTATTACCTCATTTTCTTTTTCTTCTTTCAACCATTCAATGTGAAATAATGCGAAATATTGTTCATTTCCATCTAGAAAAACATTCGTACAATCTCCTTACACTGTACTAAGACACGGGGCGTACGTTCTAACATCTTTTAGAACATCTTTGAAGTAAGGGATGGATTAAGATATCCAACATTTTTAGCTTACCCAAGAGAATATTCTTAACAGCTTTATTCAGGGGGAAGGGTAAAAGGCATAAAAATATATATAAAAAAAAGGGAAAGGTATAACCATGTTAGTTGTCAAAGCATCTTTATCTAATTCCTTTCACTGAGAGTGAAGAAGAAGAAAGTAATTTGCCTCCAACTGCGGGATAAGAATTCCTTTTCCTCTTAGCTTTCTAGTAGAGAAGAGAATAGAGATATTCTTTGTGCAGACCGTCTCCATAGTGCCTATCATGTGGCATGCACCATTTCTCTTATCGTCTGAAGTGCAGTGTTATATTGAAGCTTGCTCCTTGAGACCCTGAACATGCACTGCACGAATTTGTGTTAGTACATCATTTTATGGCTTCAAATTTCAACAATATTTGACTTCATTTTATAAATGTGCCGAATCGAAAATGGGAACATAAGGACATGTTTGGAAGTAATGTTGAAATGATTAATCTCACTTTTGTTATGTTCAAAATCTATATGAAAGTGACTTATATAATTGTAAAATCAAATAAGAAATGATTTTGAATGATTTAAGACATGTTGCGAAACAATTTTGAGAATGACAAGAATGATTTGATCAATTTTAAAATCTGCTTGGTTTGCAGTTTTATACATGATTTAAACAAAAGAAGGATCCTCTTTCCTTGCGTCTATAATCCTTCACACCATGTTTGTAGAAATGAACAGGTTGTTAAGAATTTGTGAGTGAATGAATAGTAGAGTAATTATTGTTGTGTTGTTCAGTGATTTTAGAAGGAATACAACTTTATCCTTTGTGAAAAGTAATATTTTTACGTAAACACGCAAGGTTACAAGAAAAATTACCTTTTAAAAAATGTCTACTTTTACAAATCTTTTATTCTCTCCCTCCTCCTATTGGTGTCCTACTTTGTGATGAATCAAGGATAACCAAGGAGGTTTTGCTGAGTCTATACTGTGTTTTGGCTAGTCTGTCATTGATTCCACACGTGAAGTTTTAAGGCCATCCATTAAATGTTAAGTTTGTTGTGATGTTATGTTTGTATGGACAAAAGTTTCCAATCAACCCTATACATTGGTGATTTAAGATGATCGGTAGGGAAAGTACAAAGGATGATGATATTCTATGCAATTCCAAATTTTCAATCAACATAAAAGCATGTTATAAGAATACTTGAAATTATCCATGAGAAAGATATATGACCTTTGAGCCTTTTACACAGATTCAAGAGCTTTGAACTGCTTTGTTGAAGTTTTCCAATTCCTTAGAGGAGAAACCATAGATTGCTTTTATAGTGTCCCTGCAGCTACTGAAGAAAAGATGAAGAATTAGCCAAACCATAGCATTTACAAGAATTTGGTAATCCTAGAAAGCATTGAGGCTTTCCCTAGCGACTTTAGTAGGACTTCAGTTGATTTAAAAGTGAAAATAGTTATAAATTACAATGAAGGTTTAAATTAATTCACTTGTGAAAGTTTAAGGTTCAAATAGATGCAATGTTGGTTTTTGATCCAAACCAGGTAAGGGGTGTAAATTATTTTTTTCATTCCTCTTAATTTTCTAAGCTTGTTCTCCCTTTTATCCCAGTTATTCTACAACTTAGCTTTTCGAAGTTTGAATATTACTTTCGTCTCTTTGTGGTTGAATTTAGTCCTTAATTTTGTACATTTGATCAACGTACTCCAGTTGAAAGTAGAGACCTTAAATCAAAGTGCTGCGGGCATCTACTCGCACCTTTCATTGAGTTCGAACGTTTAAATTCTTACTAAAAAAGCATTATAACTACCCTTAAACTTGAATTATCAAAAAGCAAAATTAAAGATAACAAGGTTTTATGAGAAGACCTGCAAGCAGCCTTATTGAACTTGTTTTCTTTGATTCCATATAACTTCTCAAACACAGGAGACTCTACCCGGCAAAAATAAGGGCGATCTGTGAAAATTAATGGAGAATAGTTAGGATATATACATAAACCTCATGTTTCATGTACAGCATTAGAAATCACAACTGGAAGCTGCAGATGGCTAAAACTTACCGGCATAAATGGAGCATTTACGCGTGGTCTTCTCGTAGTGAATGCACCATCCATCTACGCCAATCAAGCTTTTATAGAGCTGAAATTCATAAAGTAAAATATCTATATCAATCTATTCTGAGAAATCACAGTATAATGCTAGAAGAATTCCAGCTGAGATTTAATTCCGATGATGAAATGAATTGAAGAACCTCTATGTCGGAAGTATTCTGGAAGATTTCCTCAGGCGCGGCAAAGGACGGGCCCTTGGCGAGCTTGCAGCAGGCACCGCACCCCTCGATGCACTGCCATAATTCCTCCTTTCGTTTTCCCCCAAACCCTACGTTGATGTTCCGGCCTTGAGTGGTCTTATAATCCTTCGTCTTAGTTTTATGCGGTCGGTGAGCGGCAGTCACGGTGACTCGAGGCGGAGCCACCGCCAGGTACATTGTGTTCGGAGTTTTTAGATAAGCTTCGTCTAAAGACCAAAGTCGACTTTGGATTTTCCTTTTTCATAAAAAGATTTTCCCTATAAAATTTTAAATGTTTTCTGGAAAAGAAAATACAACAGTAACAAATTTAAAACTTCTTCTATTTTTTCATAACTCTCTCTCTCTCGTACCTTCTTAATATTACCCGTTTGATACTGTGTTTATATATCTATTTACTTGTCATATTTGTAATATACAAATTCTTTCGATAAAAATAGCAAACAAAAT ATGCCGATTCGGTGTACTCTGAATTTCAGAGTGTCAGCATTTTTTCTTCTTGTTTCGACATTCCTGAGTTGCCATTCAGAGGGTGCAGAATCGGCTGTTGTTACGCTTGATTCCATTGTAATATACAAGACGCACGAGTGGTTAGCCGCGAAACCGACTGTTTATTTTCATTGTCAAGGGGGAAATAGGACGACATTGCCTGATGTACAGAAAGAGCATGTTTTATATAGCTTCAATGGTGAAGAATCATGGCAGCCATTGACTGAATTTAAAAGCAAAAAGTGTAAGCGATGTGGGTTCTATGAAGAGGACAGTATTAAATCTGATGATGTATTTGAAGAATGGGAGTTTTGTCCATCTGATTTTACAGCTCCTGCTGGAAAATATGTACGATTCAATCCAAAAGAGTTCAATGCCACTTTTCTATGCTTGAAGTGCACAGCATATTCCAATGTTACCAGTACAAGTTCCAGTACAAGTTCGATTACGGATGGGGGAGAAAAGGGAATGCAGTCTGCTATAATCATAGTCATCAGTATAGTGGCTTCCGTCGTGTTGATTATTGGTATGGTGGTTGGTTACAAATATTGGCAAAAAAAGAGAAGACAGCAAGATCAAGCCAGGTTTCTAAAGCTTTTTGAAGATGGGGATGACATTGAAGATGAATTGGGCCTTAGCGATGTAATTTGA ATGCCGATTCGGTGTACTCTGAATTTCAGAGTGTCAGCATTTTTTCTTCTTGTTTCGACATTCCTGAGTTGCCATTCAGAGGGTGCAGAATCGGCTGTTGTTACGCTTGATTCCATTGTAATATACAAGACGCACGAGTGGTTAGCCGCGAAACCGACTGTTTATTTTCATTGTCAAGGGGGAAATAGGACGACATTGCCTGATGTACAGAAAGAGCATGTTTTATATAGCTTCAATGGTGAAGAATCATGGCAGCCATTGACTGAATTTAAAAGCAAAAAGTGTAAGCGATGTGGGTTCTATGAAGAGGACAGTATTAAATCTGATGATGTATTTGAAGAATGGGAGTTTTGTCCATCTGATTTTACAGCTCCTGCTGGAAAATATGTACGATTCAATCCAAAAGAGTTCAATGCCACTTTTCTATGCTTGAAGTGCACAGCATATTCCAATGTTACCAGTACAAGTTCCAGTACAAGTTCGATTACGGATGGGGGAGAAAAGGGAATGCAGTCTGCTATAATCATAGTCATCAGTATAGTGGCTTCCGTCGTGTTGATTATTGGTATGGTGGTTGGTTACAAATATTGGCAAAAAAAGAGAAGACAGCAAGATCAAGCCAGGTTTCTAAAGCTTTTTGAAGATGGGGATGACATTGAAGATGAATTGGGCCTTAGCGATGTAATTTGA MPIRCTLNFRVSAFFLLVSTFLSCHSEGAESAVVTLDSIVIYKTHEWLAAKPTVYFHCQGGNRTTLPDVQKEHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWEFCPSDFTAPAGKYVRFNPKEFNATFLCLKCTAYSNVTSTSSSTSSITDGGEKGMQSAIIIVISIVASVVLIIGMVVGYKYWQKKRRQQDQARFLKLFEDGDDIEDELGLSDVI* Homology
BLAST of CsaV3_4G024510 vs. NCBI nr
Match: XP_004142096.1 (uncharacterized protein LOC101220441 [Cucumis sativus] >KGN54203.1 hypothetical protein Csa_018036 [Cucumis sativus]) HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-126 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. NCBI nr
Match: XP_008447337.1 (PREDICTED: uncharacterized protein LOC103489806 [Cucumis melo]) HSP 1 Score: 437.2 bits (1123), Expect = 8.8e-119 Identity = 214/229 (93.45%), Postives = 221/229 (96.51%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. NCBI nr
Match: KAA0047322.1 (putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 404.8 bits (1039), Expect = 4.9e-109 Identity = 200/229 (87.34%), Postives = 207/229 (90.39%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. NCBI nr
Match: XP_038883476.1 (uncharacterized protein LOC120074430 isoform X1 [Benincasa hispida]) HSP 1 Score: 403.3 bits (1035), Expect = 1.4e-108 Identity = 198/229 (86.46%), Postives = 212/229 (92.58%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. NCBI nr
Match: XP_022143802.1 (uncharacterized protein LOC111013628 [Momordica charantia]) HSP 1 Score: 388.3 bits (996), Expect = 4.7e-104 Identity = 190/229 (82.97%), Postives = 207/229 (90.39%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. ExPASy TrEMBL
Match: A0A0A0KXD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293130 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 9.5e-127 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. ExPASy TrEMBL
Match: A0A1S3BH72 (uncharacterized protein LOC103489806 OS=Cucumis melo OX=3656 GN=LOC103489806 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 4.3e-119 Identity = 214/229 (93.45%), Postives = 221/229 (96.51%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. ExPASy TrEMBL
Match: A0A5A7TV39 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001430 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.4e-109 Identity = 200/229 (87.34%), Postives = 207/229 (90.39%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. ExPASy TrEMBL
Match: A0A6J1CRX4 (uncharacterized protein LOC111013628 OS=Momordica charantia OX=3673 GN=LOC111013628 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 2.3e-104 Identity = 190/229 (82.97%), Postives = 207/229 (90.39%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. ExPASy TrEMBL
Match: A0A6J1HE82 (uncharacterized protein LOC111463378 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463378 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101 Identity = 186/229 (81.22%), Postives = 203/229 (88.65%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. TAIR 10
Match: AT3G53490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 235.0 bits (598), Expect = 6.2e-62 Identity = 118/215 (54.88%), Postives = 150/215 (69.77%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. TAIR 10
Match: AT5G02720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53490.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 115.5 bits (288), Expect = 5.5e-26 Identity = 58/143 (40.56%), Postives = 91/143 (63.64%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. TAIR 10
Match: AT1G09645.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G57765.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05 Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. TAIR 10
Match: AT1G57765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 2.4e-05 Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 0
BLAST of CsaV3_4G024510 vs. TAIR 10
Match: AT1G57765.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1). ) HSP 1 Score: 47.0 bits (110), Expect = 2.4e-05 Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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