CsaV3_4G023870 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G023870
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Lipoxygenase
Location	chr4: 13895558 .. 13900190 (+)
RNA-Seq Expression	CsaV3_4G023870
Synteny	CsaV3_4G023870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGTGTTGTCAATTCATTCTTCTGATGAGGAGTACATTGGGGATGATATAGAGCCAGCCTGGGCTCTCGAGCCGTGCATAAGTAAGGCCTTCGAAAGGTTTAAAGCCAAATTGACGGATCTTGAAAAGAGGATCAACGAGCTTAATGAGAACAAAGATTTGAAGAATAGGTGTGGAGCTGGGATTATACCATACGAAGCTATGAAACCACGTTCAAAGCCTGGAATCACTGGAAGTGGAGTTCCATACAGCGTTTCCATCTAAGCATAGTCTTCTCCATATTTATTTCCATTTTGTTTGTGTGTGTTCTTTCTTCTTGCAGGTTTTCTTTTTCTCTAAAAATTAAGAACATATGTCAGCCTATTTTAAGTGTGTTTTCCTTTTTAAGTACTAGTATGTGTGTGTCTCATTTACGTCCAATATGTCATTGTTATTCCATGTTTTTAATTATAAAATAAACGAGGAAGCAAATGCATTCTTGACTTTTTCTTCATATATTTCATTCATATCTTGATGTTATTATTTTAGTTGTAAAATATCAATCAAGTTATTATTTATGACATAGGCGTGTACTAGGAAAAAACACTGATTCTAACTTTTTTTTTCTTCACAAAAGAAAGAGAAAATAGAATACTACTCACAAATAATCACTCCACAAAGTGTTACGTCCCCGCATTAAAAACAATGTAATTAAAAATTATAAATAGGTGGCTAAGTTAGTATTATTACTCTCGTCCAAGCACGTTTACGTGCAAAGTTTTGATGGGATCCAATACATTAGTACCTGGTATAACGAGATCACTCTAGGGTGTCAAACTAGTAGCTAATTGTTATATAATTTTCATATTAGGGATTTTTTAAAAATAAAACATTTACCCTTTATAGAACAATTTCGAAACCGAAAAAAGGTTATAGGACCACAATGAGAGATACAAAAAAAAAAAAAAAAAAAAAAACAATAGTTAACACGCGATTAATCAGCCACACGCACGTATGAGTAATATTTTTTCTAAACGATCGTGTATTACAGTCTAAATGAATGATCTACGATCATTTAAGTCATGATACATGATCGTGTAGTTCTTTTTAAATGATGAAAAAAATGGCTTCAAATCTAAACGATTGTGTTGGCCATGCTAAACAATCGTGTTAACTATGTTAAGCAATTGTTTAGATCATATCTCCACACGACCATATAATTCTTTTTAAACGATGGAAAAAGGGACTTCAAATCTAAAAGATTGTGTTCACCATGCGAAACGATTGTGTTGACTATGGTAAGTGATCCTTTAGATTACATCAACATTATCATGTAGTTCTTTTTAAACGTGGAAAAATTAGAGGCTTCAAATTTAAACGATCATGTTTATTATGGTAAACGATCATATCGAGAATGGTTAAACGATCATTCAGATCATATCAAAGTGATATTTAAATGATTCTGATACTTTCAAATATGAGAAAGATGAAGTACCTTCAAATTAGAATTTTGTTGAAAAGGGTGAAGATAAAATATCATATTTAAATAGAAAAATAAATCGTTTAATAATATAAGAAGAAAATGAGAAGAAATGTGCTGATAAAAGATTGATGTTACCTGATTAAGAAAAATTAATTTCAGAAATATTTATTAAATATGATTCATAAAAAAATTCAACTTTGTTTCATAACAAAGTCAACTTTTAAATTCATTAGAGAAATTGTCACTCACCCTTTCAAATAATAATAATATAATTGGAGTTATTTTGGTATAAACCAATAGTTGCTAAACTAAAATATGAACGAGAGAGATAATATATAACACAAAAGAGAGAAGAGAAAAGTAAAGTATAGAGAGCAATTTTTATTCTTCACATTTGTTCTTGAAGTGGTTTTTTTTTTTTTTTTTTTTTCGTTTTTCAATAAAACTATACGTTGGGTTACGGGTGCACACGTACATCTCCTCTAGGTGGACACATTCTTAAAGCATTACACTCCAACTCTCTAGAATAAAAACCATGGTACCACTACAAAAAAAGCGGTCTACAAAGACAGTTATTTTTTATCGCGAATAATATTCATGACAGTTATTTACAGTCATAGAAGTGGGAGTCATGGAAAGTCCTTCCATGACAGTTTTCAATAAATTTTTTCATGCTAGAAAATAAACGTCGTTAATTACTATTTTATGACAACAAATAACTGTCATCATTTGCGTATTAACGACAGTTTAAAAATGTCGCAATTCGTTTATTATGACATTTTTTAAATGTCAAGAATATGTCAATCGTGACACTTTTTTTAGAAATTAAATGTCATTGTTTTGCTATTGACGACATTTTTTTCCTGTCAAATATAAGACAATCGTGATAATTTTTCTTCTAAAAACAATGTCATTGTTTTAATATTAACGACAATTATGGAGTGTAACGAATTCATAAATTATGACATTTATTTCCTATTGCAAATTATTCAATTACTACTGTTTTTTTTTTTTTTTTTTTGTTCTCCTTGTCGCTCCGCGATTATCGAGCCATTTGAACGACAATAATGTTATATTACATAACACCCATATAGAAACAAATGGTTGACATTTTAATATATACACACTATAATATACTTTATAATATTCGTACATTTTCAATCAAGTTTGAACAATTTACAAGTCTAGAATTTCAGTCCTTAAGCAAAACTAATGTAAATACCATCATTTGGGATGTATATATAACTGTCATACTAAGTAGTTTTTCTTGTAATGTGCTGACCTAGCAGGGATGGTACACCTAATAACCCACAAATTGTATCTTTCTTTAAAAACCAACCAAATTAAAAAGTGATTACATTAGAGCGCCACCATCCTTGCACTATCTCAAGTACCTTCATGTTCTAACCATTTGCTTAAATATTGACTTAACATTAGAGGTTCATTGATAGACATCAAATTCAGTGATTTTTTTCTTTAACTTATATGTCCTACGTCCTCAAAATTACAAATCCACTATCGAAGACATATAAAAATGAGCCAAGTCTTCTTGTCCAAGTTTTGTCATCAACCATAATGATAAATTTATAATAAGGTTTGGTTGTTGTTACAAAATTGATTATGGAACACTATTGGCTCTCGACGATACAGTTTTTGAAATTGCTTATAAATATAACTAATTAACAAGTGAGGGTTTTATAATGATTTTTTAAAATATACACAAGCCAATGACAAACGCAAAACGAGCATTTTATGCTTGAAGAATCGTTAAAAATAGTAAATTTGACAAAATATTTATAATTTATAGTAAAATTTTGGATTCTATTAATAATAAACAATGATAGACACTTATAAGCTTCTATAAATGTATTGCTAGAAGTCTATTGTTTCTATAATCAATAAAATCTAAAATTTTACTCTAAGTTGTAAATATTTTAATTTATTTTATTATTTTAAAAAATGTCCTTTTTGATGATTTTAATTTTAAATTCATAAGCTCGAATATTTTTTTTATCTTTAATTCCTTTTTAATTTAGATTTTTTTAAAAAAAAAATAGTAGATTTTACAAAACATTTACAACCTATAGAAAATTATATCACCGATAGTCATTGACATGCTATAGTGATAGAATTTAAAACTTTGTTATAGCTTGTAAATATTTTAATTTATTTTGCTATTTTAAAAAATGCCTTCTTAATTTATTTGTATTTGTTTTCCATAACTTTTTAAACCTAGCCCTTGGCTTGGTAAACCCTTCCAAATTCATCCTCTAAATGGATCTTAAATTTCTTTTTTTAAAAAAAGAAGGCATGAGCCAATAGTAGCATTTGAACATCTTTACTAGGTGAACATCCTTATAGTACCATCATCATTCCCGTTTCATTAATATAAAAGAAAAGAGTATATAAAGTAAAGAATGTTCTAAAATAAGGGCTAGAGAATGGCCAAAATAAACCCATAAGTTATACAAAAGCGTGAATGTTTAAAGCAATAGTACTAATCTTTAATCCAAACATAGTTTTATAAATAAAAAATAAAAATAAATTAAAAAAAACATCAATTAAAGTAATATTTTCTTTTTTTTTTTTGCTTCCATGGACTTATCCTTTAAGTTGACTGTTGGTTTCCTTTGTGATTGTTGCAATTAATACTCCAATATTTTAAGACATTTAGAAAACATTTTTTTTAAAAAAAATATCAATATTTACGATGTTAACCAAAATAATTTAATATGTTTAAGAAAAACAAAAACAAAAAAAAAAAATTTTTGACAAGAGACCATAAGGGCATTAGAAAAAAAATAATTTAATGTATATGCTCTATATATTCAAATAGTAATTAAACTCTCAACCATCAATTGATGAAACAACAATAGCTAGGTCAAGATTTTATAATGTATTATATAATAACGACAAAATTATGGTGGTTGAGTTGTTGGACAAAATTAATAATAACAATAACAATAATAAATTGTGATGGGTGAGTGGAGATGCTCATTAATCAATTTTGATATTCAATCAGTAAAGTTGATTTTTTTTTTTTTAAATATACAAAAGATAAGGCGAGAGGAGATAGAAGTGCACCACATCAAAAGACCAGAAATGATATCATTGATCGATAAAAAGGTACCGAACGAGCTAGAGAGACGAAGCTTGGAGAGTCTATAG

mRNA sequence

ATGTTTGTGTTGTCAATTCATTCTTCTGATGAGGAGTACATTGGGGATGATATAGAGCCAGCCTGGGCTCTCGAGCCGTGCATAAGTAAGGCCTTCGAAAGGTTTAAAGCCAAATTGACGGATCTTGAAAAGAGGATCAACGAGCTTAATGAGAACAAAGATTTGAAGAATAGGTGTGGAGCTGGGATTATACCATACGAAGCTATGAAACCACGTTCAAAGCCTGGAATCACTGGAAGTGGAGTTCCATACAGCATAAGGCGAGAGGAGATAGAAGTGCACCACATCAAAAGACCAGAAATGATATCATTGATCGATAAAAAGGTACCGAACGAGCTAGAGAGACGAAGCTTGGAGAGTCTATAG

Coding sequence (CDS)

ATGTTTGTGTTGTCAATTCATTCTTCTGATGAGGAGTACATTGGGGATGATATAGAGCCAGCCTGGGCTCTCGAGCCGTGCATAAGTAAGGCCTTCGAAAGGTTTAAAGCCAAATTGACGGATCTTGAAAAGAGGATCAACGAGCTTAATGAGAACAAAGATTTGAAGAATAGGTGTGGAGCTGGGATTATACCATACGAAGCTATGAAACCACGTTCAAAGCCTGGAATCACTGGAAGTGGAGTTCCATACAGCATAAGGCGAGAGGAGATAGAAGTGCACCACATCAAAAGACCAGAAATGATATCATTGATCGATAAAAAGGTACCGAACGAGCTAGAGAGACGAAGCTTGGAGAGTCTATAG

Protein sequence

MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAGIIPYEAMKPRSKPGITGSGVPYSIRREEIEVHHIKRPEMISLIDKKVPNELERRSLESL*

Homology

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BLAST of CsaV3_4G023870 vs. NCBI nr
Match: KAE8649497.1 (hypothetical protein Csa_017972 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 1.2e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG
Sbjct: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSIRREEIEVHHIKRPEMISLIDKKVPNELERRSLES 120
           AGIIPYEAMKPRSKPGITGSGVPYSIRREEIEVHHIKRPEMISLIDKKVPNELERRSLES
Sbjct: 61  AGIIPYEAMKPRSKPGITGSGVPYSIRREEIEVHHIKRPEMISLIDKKVPNELERRSLES 120

Query: 121 L 122
           L
Sbjct: 121 L 121

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BLAST of CsaV3_4G023870 vs. NCBI nr
Match: XP_031740428.1 (LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.0e-41
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG
Sbjct: 704 MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 763

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYEAMKPRSKPGITGSGVPYS+
Sbjct: 764 AGIIPYEAMKPRSKPGITGSGVPYSV 789

[Close]

BLAST of CsaV3_4G023870 vs. NCBI nr
Match: XP_004142238.3 (lipoxygenase 2, chloroplastic [Cucumis sativus] >KAE8649494.1 hypothetical protein Csa_017907 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+P IS AFE+FKA LTDLEK+I+ELN+NKDLKNR G
Sbjct: 736 MFLLSIHSPDEEYIGDAIEPAWALDPSISNAFEKFKANLTDLEKKIDELNQNKDLKNRYG 795

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           A IIPYEAMKPRSKPGITGSGVPYS+
Sbjct: 796 AAIIPYEAMKPRSKPGITGSGVPYSV 821

[Close]

BLAST of CsaV3_4G023870 vs. NCBI nr
Match: KGN54487.2 (hypothetical protein Csa_017864 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+  ISKAFE+FKAKLTDLEK+I+ELNENKDLKNR G
Sbjct: 697 MFLLSIHSPDEEYIGDAIEPAWALDQSISKAFEKFKAKLTDLEKKIDELNENKDLKNRYG 756

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYE MKPRSKPG+TG GVPYS+
Sbjct: 757 AGIIPYEVMKPRSKPGVTGIGVPYSV 782

[Close]

BLAST of CsaV3_4G023870 vs. NCBI nr
Match: TYK21644.1 (lipoxygenase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 6.7e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+P IS+AFE+FKA LT LEK+I+ELN+NKDLKNR G
Sbjct: 165 MFLLSIHSPDEEYIGDAIEPAWALDPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYG 224

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYE MKPRSKPGITGSGVPYS+
Sbjct: 225 AGIIPYEVMKPRSKPGITGSGVPYSV 250

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy Swiss-Prot
Match: O24370 (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-22
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           VLS HS DEEYIG+ IEP WA +P I+ AFE F  KL +LE  I+  N +  L NR GAG
Sbjct: 814 VLSNHSPDEEYIGEKIEPYWAEDPVINAAFEVFSGKLKELEGIIDARNNDSKLSNRNGAG 873

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++PYE +KP S+PG+TG GVPYSI
Sbjct: 874 VMPYELLKPYSEPGVTGKGVPYSI 897

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy Swiss-Prot
Match: Q8GSM2 (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-22
Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           +LS HS DEEY+G+  EPAW  EP +  AFE+F  +L + E  I+  N N + KNRCGAG
Sbjct: 811 ILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAG 870

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
           I+PYE +KP S+PG+TG G+P SI
Sbjct: 871 IVPYELLKPFSEPGVTGRGIPNSI 894

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy Swiss-Prot
Match: P38418 (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.5e-22
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           +LS HS DEEYIG+  E +WA EP I+ AFERFK KL  LE  I+E N N  LKNR GAG
Sbjct: 811 LLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAG 870

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++ YE +KP S+ G+TG GVPYSI
Sbjct: 871 VVKYELLKPTSEHGVTGMGVPYSI 894

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy Swiss-Prot
Match: R9WS04 (Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-17
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           VLS HS DEEYIG  +E +W  EP I  AFE F  +L  L+  I+  N +  L+NR GAG
Sbjct: 814 VLSSHSPDEEYIGTSMEASWEAEPAIKSAFEEFCGRLKKLDDIIDSRNRDPILRNRTGAG 873

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++ Y+ +KP S  G+TG GVPYSI
Sbjct: 874 LVQYQLLKPFSGHGVTGKGVPYSI 897

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy Swiss-Prot
Match: O24371 (Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX3.1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.4e-17
Identity = 42/84 (50.00%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 4   LSIHSSDEEYIGDDIEPA-WALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 63
           LS HS DEEY+G+  +P+ W  +  I +AF +F A++  +EK I+E N N  LKNRCGAG
Sbjct: 829 LSTHSPDEEYLGERHQPSTWTGDAEIVEAFYKFSAEIGRIEKEIDERNANTKLKNRCGAG 888

Query: 64  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++PYE + P S PG+T  GVP S+
Sbjct: 889 VLPYELLAPSSGPGVTCRGVPNSV 912

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy TrEMBL
Match: A0A5D3DDH6 (Lipoxygenase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00060 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.3e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+P IS+AFE+FKA LT LEK+I+ELN+NKDLKNR G
Sbjct: 165 MFLLSIHSPDEEYIGDAIEPAWALDPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYG 224

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYE MKPRSKPGITGSGVPYS+
Sbjct: 225 AGIIPYEVMKPRSKPGITGSGVPYSV 250

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy TrEMBL
Match: A0A5A7TDY8 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00180 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.3e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+P IS+AFE+FKA LT LEK+I+ELN+NKDLKNR G
Sbjct: 724 MFLLSIHSPDEEYIGDAIEPAWALDPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYG 783

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYE MKPRSKPGITGSGVPYS+
Sbjct: 784 AGIIPYEVMKPRSKPGITGSGVPYSV 809

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy TrEMBL
Match: A0A1S3BNU6 (lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491676 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.3e-33
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LSIHS DEEYIGD IEPAWAL+P IS+AFE+FKA LT LEK+I+ELN+NKDLKNR G
Sbjct: 512 MFLLSIHSPDEEYIGDAIEPAWALDPSISEAFEKFKANLTVLEKKIDELNQNKDLKNRYG 571

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYE MKPRSKPGITGSGVPYS+
Sbjct: 572 AGIIPYEVMKPRSKPGITGSGVPYSV 597

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy TrEMBL
Match: A0A5A7TI85 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00160 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.2e-29
Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LS+HS DEEYIGDDIEPAW L+  IS AFE FK KL  LE +I+ELN+N+DLKNR G
Sbjct: 726 MFLLSMHSPDEEYIGDDIEPAWDLDQSISNAFEEFKTKLMMLENKIDELNQNEDLKNRNG 785

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYEAMKPRS PGITG GVPYSI
Sbjct: 786 AGIIPYEAMKPRSNPGITGIGVPYSI 811

[Close]

BLAST of CsaV3_4G023870 vs. ExPASy TrEMBL
Match: A0A5D3DDA5 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00090 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.2e-29
Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 1   MFVLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCG 60
           MF+LS+HS DEEYIGDDIEPAW L+  IS AFE FK KL  LE +I+ELN+N+DLKNR G
Sbjct: 599 MFLLSMHSPDEEYIGDDIEPAWDLDQSISNAFEEFKTKLMMLENKIDELNQNEDLKNRNG 658

Query: 61  AGIIPYEAMKPRSKPGITGSGVPYSI 87
           AGIIPYEAMKPRS PGITG GVPYSI
Sbjct: 659 AGIIPYEAMKPRSNPGITGIGVPYSI 684

[Close]

BLAST of CsaV3_4G023870 vs. TAIR 10
Match: AT3G45140.1 (lipoxygenase 2 )

HSP 1 Score: 104.4 bits (259), Expect = 6.7e-23
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           +LS HS DEEYIG+  E +WA EP I+ AFERFK KL  LE  I+E N N  LKNR GAG
Sbjct: 811 LLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAG 870

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++ YE +KP S+ G+TG GVPYSI
Sbjct: 871 VVKYELLKPTSEHGVTGMGVPYSI 894

[Close]

BLAST of CsaV3_4G023870 vs. TAIR 10
Match: AT1G17420.1 (lipoxygenase 3 )

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16
Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 4   LSIHSSDEEYIGDDIEPA-WALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 63
           LS HS DEEYIG+  +P+ W  +  I +AF  F A++  +EK I + N + D +NRCGAG
Sbjct: 834 LSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAG 893

Query: 64  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++PYE + P S+PG+T  GVP S+
Sbjct: 894 VLPYELLVPSSEPGVTCRGVPNSV 917

[Close]

BLAST of CsaV3_4G023870 vs. TAIR 10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 4   LSIHSSDEEYIGDDIEPA-WALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 63
           LS HS DEEYIG+  +P+ W  +  I  AF  F A++  +EK I++ N +   +NRCGAG
Sbjct: 841 LSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAG 900

Query: 64  IIPYEAMKPRSKPGITGSGVPYSI 87
           ++PYE M P S+PG+T  GVP S+
Sbjct: 901 VLPYELMAPSSEPGVTCRGVPNSV 924

[Close]

BLAST of CsaV3_4G023870 vs. TAIR 10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein )

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15
Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 4   LSIHSSDEEYIGD--DIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGA 63
           LS HS DEEY+ +  +++  W  +  + K F +F  +L  +EK INE N++K LKNR GA
Sbjct: 831 LSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGA 890

Query: 64  GIIPYEAMKPRSKPGITGSGVPYSI 87
           G+ PYE + P S  G+TG G+P SI
Sbjct: 891 GMPPYELLLPTSPHGVTGRGIPNSI 915

[Close]

BLAST of CsaV3_4G023870 vs. TAIR 10
Match: AT1G55020.1 (lipoxygenase 1 )

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-15
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 3   VLSIHSSDEEYIGDDIEPAWALEPCISKAFERFKAKLTDLEKRINELNENKDLKNRCGAG 62
           +LS HSSDE Y+G      WA E    +AFE+F  K+ ++EK I+E N+++ LKNR G  
Sbjct: 774 ILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLV 833

Query: 63  IIPYEAMKPRSKPGITGSGVPYSI 87
            +PY  + P S+ G+TG G+P S+
Sbjct: 834 KMPYTLLFPSSEGGVTGRGIPNSV 857

The following BLAST results are available for this feature:

BLAST of CsaV3_4G023870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649497.1	1.2e-61	100.00	hypothetical protein Csa_017972 [Cucumis sativus]	[more]
XP_031740428.1	1.0e-41	98.84	LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus]	[more]
XP_004142238.3	1.4e-33	83.72	lipoxygenase 2, chloroplastic [Cucumis sativus] >KAE8649494.1 hypothetical prote...	[more]
KGN54487.2	1.4e-33	83.72	hypothetical protein Csa_017864 [Cucumis sativus]	[more]
TYK21644.1	6.7e-33	82.56	lipoxygenase 2 [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_4G023870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24370	5.5e-22	59.52	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LO...	[more]
Q8GSM2	5.5e-22	54.76	Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1	[more]
P38418	9.5e-22	60.71	Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1	[more]
R9WS04	1.1e-17	51.19	Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=...	[more]
O24371	5.4e-17	50.00	Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LO...	[more]

BLAST of CsaV3_4G023870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDH6	3.3e-33	82.56	Lipoxygenase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00060...	[more]
A0A5A7TDY8	3.3e-33	82.56	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00180 P...	[more]
A0A1S3BNU6	3.3e-33	82.56	lipoxygenase 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491676 PE=3 ...	[more]
A0A5A7TI85	2.2e-29	76.74	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00160 P...	[more]
A0A5D3DDA5	2.2e-29	76.74	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00090 P...	[more]

BLAST of CsaV3_4G023870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45140.1	6.7e-23	60.71	lipoxygenase 2	[more]
AT1G17420.1	1.2e-16	47.62	lipoxygenase 3	[more]
AT1G72520.1	1.6e-16	47.62	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G67560.1	1.8e-15	45.88	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G55020.1	3.0e-15	44.05	lipoxygenase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..59
None	No IPR available	GENE3D	1.20.245.10		coord: 1..87 e-value: 4.8E-20 score: 73.9
None	No IPR available	PANTHER	PTHR11771:SF89	LINOLEATE 13S-LIPOXYGENASE 2-1, CHLOROPLASTIC	coord: 2..87
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 3..71 e-value: 8.9E-20 score: 70.7
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 1..88 score: 29.694443
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 2..87
IPR036226	Lipoxigenase, C-terminal domain superfamily	SUPERFAMILY	48484	Lipoxigenase	coord: 2..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G023870.1	CsaV3_4G023870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen