CsaV3_4G023520 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCTTCAGAGCTTTCGTCTCCATCGAATACTGTGGAATGCAAGGAAAGACCCCAAAAGCCCCCCTTCAGGCCTGCTAAAGATGACACCAAGCTTCTTCTCCAAGATCCGGTTCTCTCTCTCTCTCTTTCTCCCAAATTAACTCTTACTACTAATTCTTTCCTTTTCATTCTTGAATTTGGTTGTACCAATGTGCACCAACTGAAGATTGTTCTCTATTTCTTTCTTTTGTTTGTAGATACGGAGGTCAGATCCAATTGAGACTGAGGAAGCCGTGCTCCGACCACCTCCTTTCCATTTCTCTCTCCCCAAATCTAAGAACCCTTCTCAAATGGGGTGA ATGAAAGCTTCAGAGCTTTCGTCTCCATCGAATACTGTGGAATGCAAGGAAAGACCCCAAAAGCCCCCCTTCAGGCCTGCTAAAGATGACACCAAGCTTCTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACTGAGGAAGCCGTGCTCCGACCACCTCCTTTCCATTTCTCTCTCCCCAAATCTAAGAACCCTTCTCAAATGGGGTGA ATGAAAGCTTCAGAGCTTTCGTCTCCATCGAATACTGTGGAATGCAAGGAAAGACCCCAAAAGCCCCCCTTCAGGCCTGCTAAAGATGACACCAAGCTTCTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACTGAGGAAGCCGTGCTCCGACCACCTCCTTTCCATTTCTCTCTCCCCAAATCTAAGAACCCTTCTCAAATGGGGTGA MKASELSSPSNTVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPFHFSLPKSKNPSQMG* Homology
BLAST of CsaV3_4G023520 vs. NCBI nr
Match: KGN54090.1 (hypothetical protein Csa_017904 [Cucumis sativus]) HSP 1 Score: 145.6 bits (366), Expect = 1.7e-31 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. NCBI nr
Match: KAG7035826.1 (hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 119.4 bits (298), Expect = 1.3e-23 Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. NCBI nr
Match: KAG6605875.1 (hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 119.0 bits (297), Expect = 1.7e-23 Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. NCBI nr
Match: XP_022995760.1 (uncharacterized protein LOC111491196 [Cucurbita maxima]) HSP 1 Score: 114.8 bits (286), Expect = 3.1e-22 Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. NCBI nr
Match: XP_028783480.1 (uncharacterized protein LOC114739565 isoform X1 [Prosopis alba]) HSP 1 Score: 78.6 bits (192), Expect = 2.5e-11 Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. ExPASy TrEMBL
Match: A0A0A0KWV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.1e-32 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. ExPASy TrEMBL
Match: A0A6J1K4U9 (uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22 Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. ExPASy TrEMBL
Match: W9QLE6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11 Identity = 46/69 (66.67%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. ExPASy TrEMBL
Match: A0A1D1XLA5 (Mitochondrial distribution and morphology protein 34 (Fragment) OS=Anthurium amnicola OX=1678845 GN=mdm34_2 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 6.0e-11 Identity = 40/61 (65.57%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. ExPASy TrEMBL
Match: A0A1U7ZV42 (uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.8e-11 Identity = 41/62 (66.13%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of CsaV3_4G023520 vs. TAIR 10
Match: AT2G20480.1 (unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 1.0e-10 Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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