CsaV3_4G022000 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G022000
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 13078430 .. 13078791 (-)
RNA-Seq ExpressionCsaV3_4G022000
SyntenyCsaV3_4G022000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGATGGTGTCGGAAGTTTTCCTCTAAAAACCCATTTTTTAACCGATCTGAAAGGCAGTCGAAAAACAAGAGAGAGTGAGATTTTGGACTTTCGAAAGAGGAAGAAGATTCTTGTCACCGTCCACCGTTCGGTCTTCCCATTCGCTTGCTCGTCGCCCCTCGCCGACGGTAAAGCCAATCTCGTTCTTTTTTTTTCTTTCTTTATTTTGGTTTAAGGATGAGAAATATTATTAAATTTGTGATTGTTCTTATGTTTTATTATTGTACGTTGTCACCAATCCCTTTTTTTTTTTCAGTTGATGGCGTCGCCAACCCACCAGTATATAATTATTTTGTATCAATAATGTGTAAACTATGA

mRNA sequence

ATGCGTGATGGTGTCGGAAGTTTTCCTCTAAAAACCCATTTTTTAACCGATCTGAAAGGCAGTCGAAAAACAAGAGAGAGTGAGATTTTGGACTTTCGAAAGAGGAAGAAGATTCTTGTCACCGTCCACCGTTCGGTCTTCCCATTCGCTTGCTCGTCGCCCCTCGCCGACGTTGATGGCGTCGCCAACCCACCAGTATATAATTATTTTGTATCAATAATGTGTAAACTATGA

Coding sequence (CDS)

ATGCGTGATGGTGTCGGAAGTTTTCCTCTAAAAACCCATTTTTTAACCGATCTGAAAGGCAGTCGAAAAACAAGAGAGAGTGAGATTTTGGACTTTCGAAAGAGGAAGAAGATTCTTGTCACCGTCCACCGTTCGGTCTTCCCATTCGCTTGCTCGTCGCCCCTCGCCGACGTTGATGGCGTCGCCAACCCACCAGTATATAATTATTTTGTATCAATAATGTGTAAACTATGA

Protein sequence

MRDGVGSFPLKTHFLTDLKGSRKTRESEILDFRKRKKILVTVHRSVFPFACSSPLADVDGVANPPVYNYFVSIMCKL*
Homology
[Close]
BLAST of CsaV3_4G022000 vs. NCBI nr
Match: KGN53970.1 (hypothetical protein Csa_018887 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 2.4e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MRDGVGSFPLKTHFLTDLKGSRKTRESEILDFRKRKKILVTVHRSVFPFACSSPLADVDG 60
          MRDGVGSFPLKTHFLTDLKGSRKTRESEILDFRKRKKILVTVHRSVFPFACSSPLADVDG
Sbjct: 1  MRDGVGSFPLKTHFLTDLKGSRKTRESEILDFRKRKKILVTVHRSVFPFACSSPLADVDG 60

Query: 61 VANPPVYNYFVSIMCKL 78
          VANPPVYNYFVSIMCKL
Sbjct: 61 VANPPVYNYFVSIMCKL 77

[Close]
BLAST of CsaV3_4G022000 vs. ExPASy TrEMBL
Match: A0A0A0KWI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G203330 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MRDGVGSFPLKTHFLTDLKGSRKTRESEILDFRKRKKILVTVHRSVFPFACSSPLADVDG 60
          MRDGVGSFPLKTHFLTDLKGSRKTRESEILDFRKRKKILVTVHRSVFPFACSSPLADVDG
Sbjct: 1  MRDGVGSFPLKTHFLTDLKGSRKTRESEILDFRKRKKILVTVHRSVFPFACSSPLADVDG 60

Query: 61 VANPPVYNYFVSIMCKL 78
          VANPPVYNYFVSIMCKL
Sbjct: 61 VANPPVYNYFVSIMCKL 77

The following BLAST results are available for this feature:
BLAST of CsaV3_4G022000 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53970.12.4e-36100.00hypothetical protein Csa_018887 [Cucumis sativus][more]
BLAST of CsaV3_4G022000 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G022000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWI51.2e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G203330 PE=4 SV=1[more]
BLAST of CsaV3_4G022000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G022000.1CsaV3_4G022000.1mRNA