CsaV3_4G017490 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G017490
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionethylene-responsive transcription factor RAP2-11
Locationchr4: 10936089 .. 10937581 (+)
RNA-Seq ExpressionCsaV3_4G017490
SyntenyCsaV3_4G017490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGTTCAGTTGAAAAACAAGAGCATAGAGATGTTGCATTTAAATTAGTTGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTAGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACACCGGAGGAAGCTGCCAGAGCTTACGACGAAGCTGCCTGCCTCCTACGTGGCTCGAATGCTAGAACCAACTTCACTCTCGCTTCCAACTCCTCCTCTGCCCTCTCTTTCAAAATCAGAAACCTTCTCATTCATAAGATCACTTTGAAACGAAGTTCAATCACTGAAACTCATGCTCATGTTGCTCATTCTGAAACAAACCAAGAAATGCACATGTTTGACAATAATGCAGTCTGGAGCAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCGATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACTGAATGGAATCACTCAACATTTAGGAAATGCATATGATGATGCCTTTGACACACCTGCTGCTCACATTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGACCCCTCTACTTCTATTTTTCTATTGGAGTAAGGGAAGAATAATGACTCAATTGCATACTGTTTCTTCTCATTTTTCCATGGGCCAAAGGAAGGGATATTAATTCCATCAGCAATCTAATTTGACAGAGACTACAAATCTAGATATAAAGGATGGTTGACAACAAGCTATGAAAGTACGAAAAAAATCATTTCCTTTTGTGTGGATAGGAGAGTTAACTTGAAAAAAATGCTTTAATCTTTTTTATTTTTTAATTCTTGACTAGAGTCGATCATCAACCAGACTAATTTCAAAGTGAACAATAATTAAGTGTAACTTATGTTACACTCATACTTCCTTTCTCTTTACACAAAATAATCATTTGAAAAGAATTGTCACATGATATTTCTTTATAAGACACTTACATAGACTGTACGAAGATAGATGCCAACCCAACACCGTCTATGTTCTTTTCTTGCAAAAGATCGAAGGTGTGAAATTTCAGGCATGACAAGAAAGGGGTAAATGATTGGACCTGTGAGTGAATAAGTGAGAGTTTTGCTGGAGTCCTTCAAATTCAAGTGATGATGGCCCATCTAAAGCCAAGCACGTTGTGTTGTCGTCAAGCAAGCCAAACGATCTCTCCCTCAAAGATAAACAAACATGTACAACCTTTTCATATTAGAAAAAAAAAATGTACAAATTATCTATTATAATATTGATCCATCCACAATTCAAGACAATACAGAATTTCAGTCTAAACACTGGCGTAAATATTCCTGATTTCATACAAAGAGCCACAAAGATACAGAATCGAAATTTACTACAAGACAGCAGAATTGCTTATAGAAAGGAAAACGACAGGCTCTTCTTTCACTAG

mRNA sequence

ATGGAGAGTTCAGTTGAAAAACAAGAGCATAGAGATGTTGCATTTAAATTAGTTGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTAGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACACCGGAGGAAGCTGCCAGAGCTTACGACGAAGCTGCCTGCCTCCTACGTGGCTCGAATGCTAGAACCAACTTCACTCTCGCTTCCAACTCCTCCTCTGCCCTCTCTTTCAAAATCAGAAACCTTCTCATTCATAAGATCACTTTGAAACGAAGTTCAATCACTGAAACTCATGCTCATGTTGCTCATTCTGAAACAAACCAAGAAATGCACATGTTTGACAATAATGCAGTCTGGAGCAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCGATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACTGAATGGAATCACTCAACATTTAGGAAATGCATATGATGATGCCTTTGACACACCTGCTGCTCACATTGATTATACCGATTTCTCTTCATTTTTCTTTACAATACAGAATTTCAGTCTAAACACTGGCGTAAATATTCCTGATTTCATACAAAGAGCCACAAAGATACAGAATCGAAATTTACTACAAGACAGCAGAATTGCTTATAGAAAGGAAAACGACAGGCTCTTCTTTCACTAG

Coding sequence (CDS)

ATGGAGAGTTCAGTTGAAAAACAAGAGCATAGAGATGTTGCATTTAAATTAGTTGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTAGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACACCGGAGGAAGCTGCCAGAGCTTACGACGAAGCTGCCTGCCTCCTACGTGGCTCGAATGCTAGAACCAACTTCACTCTCGCTTCCAACTCCTCCTCTGCCCTCTCTTTCAAAATCAGAAACCTTCTCATTCATAAGATCACTTTGAAACGAAGTTCAATCACTGAAACTCATGCTCATGTTGCTCATTCTGAAACAAACCAAGAAATGCACATGTTTGACAATAATGCAGTCTGGAGCAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCGATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACTGAATGGAATCACTCAACATTTAGGAAATGCATATGATGATGCCTTTGACACACCTGCTGCTCACATTGATTATACCGATTTCTCTTCATTTTTCTTTACAATACAGAATTTCAGTCTAAACACTGGCGTAAATATTCCTGATTTCATACAAAGAGCCACAAAGATACAGAATCGAAATTTACTACAAGACAGCAGAATTGCTTATAGAAAGGAAAACGACAGGCTCTTCTTTCACTAG

Protein sequence

MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHAHVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGITQHLGNAYDDAFDTPAAHIDYTDFSSFFFTIQNFSLNTGVNIPDFIQRATKIQNRNLLQDSRIAYRKENDRLFFH*
Homology
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BLAST of CsaV3_4G017490 vs. NCBI nr
Match: KAE8649421.1 (hypothetical protein Csa_021681 [Cucumis sativus])

HSP 1 Score: 516.2 bits (1328), Expect = 1.7e-142
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120
           NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA
Sbjct: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180
           HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT
Sbjct: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180

Query: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFFTIQNFSLNTGVNIPDFIQRATKIQNRNLLQDS 240
           QHLGNAYDDAFDTPAAHIDYTDFSSFFFTIQNFSLNTGVNIPDFIQRATKIQNRNLLQDS
Sbjct: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFFTIQNFSLNTGVNIPDFIQRATKIQNRNLLQDS 240

Query: 241 RIAYRKENDRLFFH 255
           RIAYRKENDRLFFH
Sbjct: 241 RIAYRKENDRLFFH 254

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BLAST of CsaV3_4G017490 vs. NCBI nr
Match: XP_004149659.1 (ethylene-responsive transcription factor ERN2 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 5.0e-115
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120
           NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA
Sbjct: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180
           HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT
Sbjct: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180

Query: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFF 209
           QHLGNAYDDAFDTPAAHIDYTDFSSFFF
Sbjct: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFF 208

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BLAST of CsaV3_4G017490 vs. NCBI nr
Match: XP_008449953.1 (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Cucumis melo] >KAA0040108.1 ethylene-responsive transcription factor RAP2-11 [Cucumis melo var. makuwa] >TYK21733.1 ethylene-responsive transcription factor RAP2-11 [Cucumis melo var. makuwa])

HSP 1 Score: 392.5 bits (1007), Expect = 2.8e-105
Identity = 192/208 (92.31%), Postives = 197/208 (94.71%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           ME SVEKQE RDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120
           NT EEAARAYDEAACLLRGSNARTNFTLASNSSS LSFKIRNLLIHKITLKRSSITETHA
Sbjct: 61  NTAEEAARAYDEAACLLRGSNARTNFTLASNSSSTLSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180
           HVAHSETNQE HMFDN+ VW+SCNGEIEVGFCHFTHSCC LPLGFNFDMDESLSA NGIT
Sbjct: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180

Query: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFF 209
           +HLGN YDDAFDT +A +DYTDFSSFFF
Sbjct: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFF 208

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BLAST of CsaV3_4G017490 vs. NCBI nr
Match: XP_038902282.1 (ethylene-responsive transcription factor RAP2-11-like [Benincasa hispida])

HSP 1 Score: 284.3 bits (726), Expect = 1.1e-72
Identity = 149/200 (74.50%), Postives = 162/200 (81.00%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAFKLVG-KCIKKRSGK--RSFVGVRQRPSGKWVAEIKDATHDIRMWL 60
           ME SVEKQ+H+    KL G KC K RSGK  RSFVGVRQRPSGKWVAEIKD THDIRMWL
Sbjct: 1   MEGSVEKQDHK----KLPGAKCSKDRSGKRQRSFVGVRQRPSGKWVAEIKDTTHDIRMWL 60

Query: 61  GTFNTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITE 120
           GTFNT E AARAYDEAACL+RG NARTNFTL S SSSALS KIRNLLIHKITLKR++I  
Sbjct: 61  GTFNTAEAAARAYDEAACLIRGPNARTNFTLTSTSSSALSIKIRNLLIHKITLKRNAIKT 120

Query: 121 THAHVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCD-LPLGFNFDMDESLSAL 180
                AHS T Q+MH+FDNNA+WS+C G+ E+GFCH THSCC  LPLGFN DMDE LSAL
Sbjct: 121 P----AHSATVQDMHIFDNNALWSTCTGDFEMGFCHVTHSCCSHLPLGFNLDMDEPLSAL 180

Query: 181 NGITQHLGNAYDDAFDTPAA 197
           NGITQHLGN YDD+F +  A
Sbjct: 181 NGITQHLGNTYDDSFGSDTA 192

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BLAST of CsaV3_4G017490 vs. NCBI nr
Match: KAG6570315.1 (Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.0 bits (502), Expect = 1.0e-46
Identity = 125/239 (52.30%), Postives = 150/239 (62.76%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAF--KLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLG 60
           ME SVEKQ+H++V+     VGKC K RS +RSFVGVRQRPSGKWVAEIKD THDIRMWLG
Sbjct: 71  MEGSVEKQQHKEVSVSGSKVGKC-KDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLG 130

Query: 61  TFNTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSS---- 120
           TF T EEAA AYDEAA LLRG+N RTNF     S+SALSFKIRNLL  K++LKRSS    
Sbjct: 131 TFKTAEEAATAYDEAARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKVSLKRSSSKTS 190

Query: 121 ---------ITETHAHVAHS-ETNQEMHMFDNNAVWSS-CNGEIEV-GFCHFTHSCCDLP 180
                    I   H+ ++ S  TNQE+H   +NA WSS C+GE+EV G   F+HS   LP
Sbjct: 191 PTKLGPISEIEGAHSGLSFSTATNQEIHKTFDNADWSSACSGEVEVLGLRQFSHSWWHLP 250

Query: 181 LGFNFDMDE----------------------------SLSALNGITQHLGNAYDDAFDT 194
           LG N +MDE                             + A+NG++++LG  Y DAFD+
Sbjct: 251 LGLNLEMDEPPDPLLTHQDRQVAEMSCDSEQLDLTSIPMCAVNGMSEYLGTTY-DAFDS 307

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BLAST of CsaV3_4G017490 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.4e-27
Identity = 63/90 (70.00%), Postives = 69/90 (76.67%), Query Frame = 0 

Query: 23  KKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNA 82
           K +  K  FVGVRQRPSGKWVAEIKD T  IRMWLGTF T EEAARAYDEAACLLRGSN 
Sbjct: 14  KSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNT 73

Query: 83  RTNFTLASNSSSALSFKIRNLLIHKITLKR 113
           RTNF     ++S LS KIRNLL  K ++K+
Sbjct: 74  RTNFANHFPNNSQLSLKIRNLLHQKQSMKQ 103

[Close]
BLAST of CsaV3_4G017490 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-24
Identity = 58/84 (69.05%), Postives = 64/84 (76.19%), Query Frame = 0 

Query: 24  KRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNAR 83
           + S    FVGVRQRPSG+WVAEIKD T  IRMWLGTF T EEAARAYDEAACLLRGSN R
Sbjct: 28  RNSNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTR 87

Query: 84  TNFTLASNSSSALSFKIRNLLIHK 108
           TNF    +  S L+ +IRNLL +K
Sbjct: 88  TNFITHVSLDSPLASRIRNLLNNK 111

[Close]
BLAST of CsaV3_4G017490 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.3e-24
Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 23  KKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNA 82
           +  +    FVGVRQRPSG+WVAEIKD T  IRMWLGTF T EEAARAYDEAACLLRGSN 
Sbjct: 31  RNSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNT 90

Query: 83  RTNFTLASNSSSALSFKIRNLL 105
           RTNF    +  S L+ +IRNLL
Sbjct: 91  RTNFITHVSLDSPLASRIRNLL 112

[Close]
BLAST of CsaV3_4G017490 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-22
Identity = 80/232 (34.48%), Postives = 112/232 (48.28%), Query Frame = 0 

Query: 23  KKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNA 82
           KK   +  FVGVRQRPSG++VAEIKD T +IRMWLGTF T EEAARAYDEAA LLRGS  
Sbjct: 25  KKSETRDKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTFETAEEAARAYDEAATLLRGSKT 84

Query: 83  RTNFTLASNSSSALSFKIRNLLIH-KITLKRSSITETHAHVAHSETNQEMHMFDNNAVWS 142
           RTNF    +  S L+ +IR+LL + K   K+  +    +  +H++T  +     + +  +
Sbjct: 85  RTNFVTHVSYDSPLASRIRHLLNNRKKGTKQQDMNGISSTTSHADTTNDTTSDGSTSSTT 144

Query: 143 SCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGITQHLGNAYDDAFDTPAAHIDYT 202
           +C G                          + ++ +G+T    N    A    +   D +
Sbjct: 145 NCIGTASGAI--------------------NSTSASGVTSTSTNISTSASGVASTSTDIS 204

Query: 203 DFSSFFFTIQNFSLNTGVN--IPDFIQRATKIQNRNLLQDSRIAYRKENDRL 252
             SS          NT VN      +  +T +Q  NL +D   AYR +   L
Sbjct: 205 TNSS----------NTNVNDKSESLLSSSTTMQKPNLFED---AYRPDMSNL 223

[Close]
BLAST of CsaV3_4G017490 vs. ExPASy Swiss-Prot
Match: A9Y0K9 (Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=ERN3 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.9e-20
Identity = 61/127 (48.03%), Postives = 81/127 (63.78%), Query Frame = 0 

Query: 28  KRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNARTNFT 87
           +  FVGVRQR SGKW AEIKD + +IRMWLGT+ T EEAARAYDEAA LLRG+N RTNF+
Sbjct: 22  RSKFVGVRQRASGKWAAEIKDTSKNIRMWLGTYKTAEEAARAYDEAAFLLRGTNTRTNFS 81

Query: 88  LASN--SSSALSFKIRNLLIHKITLKRSSITETHAHVAHSE------TNQEMHMFDNNAV 147
              +  ++S +S K++NLL H+ ++   S ++    +  S        N  M M + N  
Sbjct: 82  TTHSIPTNSPISLKLKNLL-HRKSISNLSQSKNQCTLMSSSLQGAPIDNSIMVMENENK- 141

[Close]
BLAST of CsaV3_4G017490 vs. ExPASy TrEMBL
Match: A0A0A0L1N6 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G268100 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.4e-115
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120
           NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA
Sbjct: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180
           HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT
Sbjct: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180

Query: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFF 209
           QHLGNAYDDAFDTPAAHIDYTDFSSFFF
Sbjct: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFF 208

[Close]
BLAST of CsaV3_4G017490 vs. ExPASy TrEMBL
Match: A0A5D3DDY8 (Ethylene-responsive transcription factor RAP2-11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001050 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105
Identity = 192/208 (92.31%), Postives = 197/208 (94.71%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           ME SVEKQE RDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120
           NT EEAARAYDEAACLLRGSNARTNFTLASNSSS LSFKIRNLLIHKITLKRSSITETHA
Sbjct: 61  NTAEEAARAYDEAACLLRGSNARTNFTLASNSSSTLSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180
           HVAHSETNQE HMFDN+ VW+SCNGEIEVGFCHFTHSCC LPLGFNFDMDESLSA NGIT
Sbjct: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180

Query: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFF 209
           +HLGN YDDAFDT +A +DYTDFSSFFF
Sbjct: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFF 208

[Close]
BLAST of CsaV3_4G017490 vs. ExPASy TrEMBL
Match: A0A1S3BN65 (ethylene-responsive transcription factor RAP2-11 OS=Cucumis melo OX=3656 GN=LOC103491681 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105
Identity = 192/208 (92.31%), Postives = 197/208 (94.71%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60
           ME SVEKQE RDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF
Sbjct: 1   MEGSVEKQERRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTF 60

Query: 61  NTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHA 120
           NT EEAARAYDEAACLLRGSNARTNFTLASNSSS LSFKIRNLLIHKITLKRSSITETHA
Sbjct: 61  NTAEEAARAYDEAACLLRGSNARTNFTLASNSSSTLSFKIRNLLIHKITLKRSSITETHA 120

Query: 121 HVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGIT 180
           HVAHSETNQE HMFDN+ VW+SCNGEIEVGFCHFTHSCC LPLGFNFDMDESLSA NGIT
Sbjct: 121 HVAHSETNQETHMFDNDTVWNSCNGEIEVGFCHFTHSCCHLPLGFNFDMDESLSAPNGIT 180

Query: 181 QHLGNAYDDAFDTPAAHIDYTDFSSFFF 209
           +HLGN YDDAFDT +A +DYTDFSSFFF
Sbjct: 181 EHLGNTYDDAFDTSSAQLDYTDFSSFFF 208

[Close]
BLAST of CsaV3_4G017490 vs. ExPASy TrEMBL
Match: A0A6J1JC79 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=3661 GN=LOC111483721 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 6.3e-47
Identity = 126/239 (52.72%), Postives = 152/239 (63.60%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAF--KLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLG 60
           ME SVEKQ+H++V+     +GKC K RS +RSFVGVRQRPSGKWVAEIKD THDIRMWLG
Sbjct: 28  MEGSVEKQQHKEVSVSGSKIGKC-KDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLG 87

Query: 61  TFNTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSS---- 120
           TF T EEAA AYDEAA LLRG+N RTNF     S+SALSFKIRNLL  KI+LKRSS    
Sbjct: 88  TFKTAEEAATAYDEAARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKISLKRSSSKTS 147

Query: 121 ------ITE---THAHVAHS-ETNQEMHMFDNNAVWSS-CNGEIE-VGFCHFTHSCCDLP 180
                 ITE    H+ ++ S  TNQE+H   +NA WSS C+GE+E +G   F+HS   LP
Sbjct: 148 PTKLGPITEIEGAHSGLSFSTATNQEIHKTFDNADWSSACSGEVEALGLRQFSHSWWHLP 207

Query: 181 LGFNFDMDE----------------------------SLSALNGITQHLGNAYDDAFDT 194
           LG N +MDE                             + A+NG++++LG  Y DAFD+
Sbjct: 208 LGLNLEMDEPPDPLLSHQDRQVAEMSCDSEQLDLTSIPMCAVNGMSEYLGTTY-DAFDS 264

[Close]
BLAST of CsaV3_4G017490 vs. ExPASy TrEMBL
Match: A0A6J1FVD0 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3662 GN=LOC111448784 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 7.0e-46
Identity = 126/239 (52.72%), Postives = 150/239 (62.76%), Query Frame = 0 

Query: 1   MESSVEKQEHRDVAF--KLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLG 60
           ME SVEKQ+H++V+     VGKC K RS + SFVGVRQRPSGKWVAEIKD THDIRMWLG
Sbjct: 3   MEGSVEKQQHKEVSVSGSKVGKC-KDRSRRCSFVGVRQRPSGKWVAEIKDTTHDIRMWLG 62

Query: 61  TFNTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSS---- 120
           TF T EEAA AYDEAA LLRG+N RTNF     S+ ALSFKIRNLL  KI+LKRSS    
Sbjct: 63  TFKTAEEAATAYDEAARLLRGANTRTNFATHLKSTPALSFKIRNLLNQKISLKRSSSKTS 122

Query: 121 ------ITE---THAHVAHS-ETNQEMHMFDNNAVWSS-CNGEIEV-GFCHFTHSCCDLP 180
                 ITE    H+ ++ S  TNQE+H   +NA WSS C+GE+EV G   F+HS   LP
Sbjct: 123 PTKLGPITEIEGAHSGLSFSTATNQEIHKTFDNADWSSACSGEVEVLGLRQFSHSWWHLP 182

Query: 181 LGFNFDMDE----------------------------SLSALNGITQHLGNAYDDAFDT 194
           LG N +MDE                             + A+NG++++LG  Y DAFD+
Sbjct: 183 LGLNLEMDEPPDPLLTHQDRQVAEMSCDSEQLDLTSIPMCAVNGMSEYLGTTY-DAFDS 239

[Close]
BLAST of CsaV3_4G017490 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 122.9 bits (307), Expect = 3.8e-28
Identity = 63/90 (70.00%), Postives = 69/90 (76.67%), Query Frame = 0 

Query: 23  KKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNA 82
           K +  K  FVGVRQRPSGKWVAEIKD T  IRMWLGTF T EEAARAYDEAACLLRGSN 
Sbjct: 14  KSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNT 73

Query: 83  RTNFTLASNSSSALSFKIRNLLIHKITLKR 113
           RTNF     ++S LS KIRNLL  K ++K+
Sbjct: 74  RTNFANHFPNNSQLSLKIRNLLHQKQSMKQ 103

[Close]
BLAST of CsaV3_4G017490 vs. TAIR 10
Match: AT4G23750.1 (cytokinin response factor 2 )

HSP 1 Score: 82.0 bits (201), Expect = 7.5e-16
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 26  SGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNARTN 85
           +G++ F GVRQRP GKW AEI+D    +R+WLGT+NT EEAA  YD AA  LRG +A TN
Sbjct: 117 TGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTN 176

Query: 86  FTLASNSSS 95
           F++   +++
Sbjct: 177 FSVTPTTAT 185

[Close]
BLAST of CsaV3_4G017490 vs. TAIR 10
Match: AT4G23750.2 (cytokinin response factor 2 )

HSP 1 Score: 82.0 bits (201), Expect = 7.5e-16
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 26  SGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNARTN 85
           +G++ F GVRQRP GKW AEI+D    +R+WLGT+NT EEAA  YD AA  LRG +A TN
Sbjct: 117 TGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTN 176

Query: 86  FTLASNSSS 95
           F++   +++
Sbjct: 177 FSVTPTTAT 185

[Close]
BLAST of CsaV3_4G017490 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-15
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 0 

Query: 29 RSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNARTNFTL 88
          + F GVRQR  G WVAEI+      R+WLGTF T EEAARAYDEAA L+ G NA+TNF L
Sbjct: 5  KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 89 ASNSSSALS 98
           +N++   S
Sbjct: 65 NNNNTGETS 73

[Close]
BLAST of CsaV3_4G017490 vs. TAIR 10
Match: AT3G14230.1 (related to AP2 2 )

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-15
Identity = 39/70 (55.71%), Postives = 46/70 (65.71%), Query Frame = 0 

Query: 24  KRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNAR 83
           KR  K  + G+RQRP GKW AEI+D     R WLGTF+T EEAARAYD AA  +RG+ A+
Sbjct: 121 KRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAK 180

Query: 84  TNFTLASNSS 94
            NF    N S
Sbjct: 181 VNFPEEKNPS 190

The following BLAST results are available for this feature:
BLAST of CsaV3_4G017490 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649421.11.7e-142100.00hypothetical protein Csa_021681 [Cucumis sativus][more]
XP_004149659.15.0e-115100.00ethylene-responsive transcription factor ERN2 [Cucumis sativus][more]
XP_008449953.12.8e-10592.31PREDICTED: ethylene-responsive transcription factor RAP2-11 [Cucumis melo] >KAA0... [more]
XP_038902282.11.1e-7274.50ethylene-responsive transcription factor RAP2-11-like [Benincasa hispida][more]
KAG6570315.11.0e-4652.30Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma s... [more]
BLAST of CsaV3_4G017490 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6J9S15.4e-2770.00Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702... [more]
A0A1X9PY881.1e-2469.05Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN... [more]
A2Q5W17.3e-2468.29Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=... [more]
A9Y0K86.8e-2234.48Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=... [more]
A9Y0K94.9e-2048.03Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=... [more]
BLAST of CsaV3_4G017490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1N62.4e-115100.00AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G268100 PE=... [more]
A0A5D3DDY81.3e-10592.31Ethylene-responsive transcription factor RAP2-11 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3BN651.3e-10592.31ethylene-responsive transcription factor RAP2-11 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1JC796.3e-4752.72ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=366... [more]
A0A6J1FVD07.0e-4652.72ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3... [more]
BLAST of CsaV3_4G017490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G19790.13.8e-2870.00related to AP2 11 [more]
AT4G23750.17.5e-1653.62cytokinin response factor 2 [more]
AT4G23750.27.5e-1653.62cytokinin response factor 2 [more]
AT1G15360.13.7e-1557.97Integrase-type DNA-binding superfamily protein [more]
AT3G14230.13.7e-1555.71related to AP2 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 31..42
score: 56.97
coord: 53..69
score: 65.99
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 30..93
e-value: 2.4E-35
score: 133.4
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 31..79
e-value: 9.9E-13
score: 48.1
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 30..87
score: 19.466835
IPR001471AP2/ERF domainCDDcd00018AP2coord: 31..86
e-value: 4.89721E-31
score: 107.743
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 30..89
e-value: 3.0E-22
score: 80.5
NoneNo IPR availablePANTHERPTHR31194:SF90ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-11coord: 14..190
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 14..190
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 31..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G017490.1CsaV3_4G017490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity