CsaV3_4G016080 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G016080
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pectinesterase
Location	chr4: 10682988 .. 10683270 (-)
RNA-Seq Expression	CsaV3_4G016080
Synteny	CsaV3_4G016080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAATTCCACAGTGTCTTTAGATGGTACAGAAAATTTTATTAAAATTAACGATGCTATAGCAGCAGCACCCAATTTTAGTACGACAAGATTTTACATTCATGTCAAACCTGGAACTTACCAGGAGATTATTGAAGTTCCATACGAGAAAACTTGTATTGCTTTAATTGGAGATGATTCTTCTACTACCATCATCGTTAACAATCGAAGTAATGGCACTGGGTCCTCCACGGCATCTTCTGCGACTCTCAGTAAGCTTCAACTATCTCAACCCTCATTTTAA

mRNA sequence

TTCAATTCCACAGTGTCTTTAGATGGTACAGAAAATTTTATTAAAATTAACGATGCTATAGCAGCAGCACCCAATTTTAGTACGACAAGATTTTACATTCATGTCAAACCTGGAACTTACCAGGAGATTATTGAAGTTCCATACGAGAAAACTTGTATTGCTTTAATTGGAGATGATTCTTCTACTACCATCATCGTTAACAATCGAAGTAATGGCACTGGGTCCTCCACGGCATCTTCTGCGACTCTCAGTAAGCTTCAACTATCTCAACCCTCATTTTA

Coding sequence (CDS)

TTCAATTCCACAGTGTCTTTAGATGGTACAGAAAATTTTATTAAAATTAACGATGCTATAGCAGCAGCACCCAATTTTAGTACGACAAGATTTTACATTCATGTCAAACCTGGAACTTACCAGGAGATTATTGAAGTTCCATACGAGAAAACTTGTATTGCTTTAATTGGAGATGATTCTTCTACTACCATCATCGTTAACAATCGAAGTAATGGCACTGGGTCCTCCACGGCATCTTCTGCGACTCTCAGTAAGCTTCAACTATCTCAACCCTCATTTTA

Protein sequence

FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSSTTIIVNNRSNGTGSSTASSATLSKLQLSQPSFX

Homology

[Close]

BLAST of CsaV3_4G016080 vs. NCBI nr
Match: KAE8649408.1 (hypothetical protein Csa_023566, partial [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 8.0e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
          FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS
Sbjct: 1  FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60

Query: 61 STTIIVNNRSNGTGSSTASSATLSKLQLSQPSF 94
          STTIIVNNRSNGTGSSTASSATLSKLQLSQPSF
Sbjct: 61 STTIIVNNRSNGTGSSTASSATLSKLQLSQPSF 93

[Close]

BLAST of CsaV3_4G016080 vs. NCBI nr
Match: XP_031745525.1 (probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 1.7e-36
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
           FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS
Sbjct: 28  FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 87

Query: 61  STTIIVNNRSNGTGSSTASSATLS 85
           STTIIVNNRSNGTGSSTASSATL+
Sbjct: 88  STTIIVNNRSNGTGSSTASSATLT 111

[Close]

BLAST of CsaV3_4G016080 vs. NCBI nr
Match: XP_011654361.2 (probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 1.7e-36
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
           FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS
Sbjct: 28  FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 87

Query: 61  STTIIVNNRSNGTGSSTASSATLS 85
           STTIIVNNRSNGTGSSTASSATL+
Sbjct: 88  STTIIVNNRSNGTGSSTASSATLT 111

[Close]

BLAST of CsaV3_4G016080 vs. NCBI nr
Match: XP_031741746.1 (probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus] >KAE8648510.1 hypothetical protein Csa_009140 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 4.4e-32
Identity = 74/80 (92.50%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 5  VSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSSTTI 64
          +SLDGT NF+KINDAIAAAPNFSTTRFYIHVKPGTY+EIIEVPYEKTCIALIGDD+STTI
Sbjct: 5  LSLDGTGNFVKINDAIAAAPNFSTTRFYIHVKPGTYKEIIEVPYEKTCIALIGDDASTTI 64

Query: 65 IVNNRSNGTGSSTASSATLS 85
          IVNNRSNGTGSSTASSATL+
Sbjct: 65 IVNNRSNGTGSSTASSATLT 84

[Close]

BLAST of CsaV3_4G016080 vs. NCBI nr
Match: KAA0040551.1 (putative pectinesterase/pectinesterase inhibitor 39 [Cucumis melo var. makuwa] >TYK05594.1 putative pectinesterase/pectinesterase inhibitor 39 [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 4.1e-30
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 5  VSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSSTTI 64
          VSLDGT NF+K+NDAIAAAPNFS TRFYIHVKPGTYQEIIEVP EKT IALIGDDSSTTI
Sbjct: 12 VSLDGTGNFVKVNDAIAAAPNFSMTRFYIHVKPGTYQEIIEVPSEKTFIALIGDDSSTTI 71

Query: 65 IVNNRSNGTGSSTASSATLS 85
          IVNNRSNGTGSSTASSATL+
Sbjct: 72 IVNNRSNGTGSSTASSATLT 91

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy Swiss-Prot
Match: O48711 (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana OX=3702 GN=PME12 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-13
Identity = 43/80 (53.75%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 5   VSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSSTTI 64
           V+ DGT NF  IN+AI+ APN S  R  I+VK G Y E I++P  KT I LIGD S  T 
Sbjct: 240 VAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTF 299

Query: 65  IVNNRSNGTGSSTASSATLS 85
           I  NRS G G +T  SATL+
Sbjct: 300 ITGNRSVGDGWTTFRSATLA 319

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy Swiss-Prot
Match: O81415 (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana OX=3702 GN=PME39 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-13
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 1   FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
           +N +V++DGT NF  INDA+ AAPN S TRF I++K G Y E +E+P +KT I  IGD  
Sbjct: 220 YNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGI 279

Query: 61  STTIIVNNRSNGTGSSTASSATL 84
             T+I  NRS   G ST  + T+
Sbjct: 280 GKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy Swiss-Prot
Match: O81301 (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana OX=3702 GN=PME40 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-11
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 2   NSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSS 61
           N  V+ +GT N+  I +AI+AAPN S TRF I++K G Y E IE+P EKT I  IGD   
Sbjct: 207 NLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIG 266

Query: 62  TTIIVNNRSNGTGSSTASSATL 84
            T+I  NRS   G +   SAT+
Sbjct: 267 RTVIKANRSYADGWTAFHSATV 288

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy Swiss-Prot
Match: Q9SMY7 (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana OX=3702 GN=PME44 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-11
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 1   FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
           ++ +V+LDGT NF KI DAI  AP++S+TRF I++K G Y E +E+  +K  I ++GD  
Sbjct: 211 YDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGI 270

Query: 61  STTIIVNNRSNGTGSSTASSATLS 85
             T+I  NRS   G +T  SAT +
Sbjct: 271 DVTVISGNRSFIDGWTTFRSATFA 294

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy Swiss-Prot
Match: Q9LXK7 (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana OX=3702 GN=PME32 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.6e-11
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 2   NSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSS 61
           ++ V+ DGT NF  I+DA+ AAP++ST R+ IHVK G Y E +E+  +K  I ++GD   
Sbjct: 214 DAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGID 273

Query: 62  TTIIVNNRSNGTGSSTASSATLS 85
            T+I  NRS   G +T  SAT +
Sbjct: 274 ATVITGNRSFIDGWTTFRSATFA 296

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy TrEMBL
Match: A0A0A0KNI2 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G488760 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.7e-37
Identity = 84/89 (94.38%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1   FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
           FN TVSLDGT NF+KINDAIAAAPNFSTTRFYIHVKPGTY+EIIEVPYEKTCIALIGDD+
Sbjct: 28  FNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYIHVKPGTYKEIIEVPYEKTCIALIGDDA 87

Query: 61  STTIIVNNRSNGTGSSTASSATLSKLQLS 90
           STTIIVNNRSNGTGSSTASSATLSKLQLS
Sbjct: 88  STTIIVNNRSNGTGSSTASSATLSKLQLS 116

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy TrEMBL
Match: A0A0A0L1M3 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_4G260430 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.3e-37
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
           FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS
Sbjct: 21  FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 80

Query: 61  STTIIVNNRSNGTGSSTASSATLS 85
           STTIIVNNRSNGTGSSTASSATL+
Sbjct: 81  STTIIVNNRSNGTGSSTASSATLT 104

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy TrEMBL
Match: A0A5D3C2R6 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00440 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-30
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 5  VSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSSTTI 64
          VSLDGT NF+K+NDAIAAAPNFS TRFYIHVKPGTYQEIIEVP EKT IALIGDDSSTTI
Sbjct: 12 VSLDGTGNFVKVNDAIAAAPNFSMTRFYIHVKPGTYQEIIEVPSEKTFIALIGDDSSTTI 71

Query: 65 IVNNRSNGTGSSTASSATLS 85
          IVNNRSNGTGSSTASSATL+
Sbjct: 72 IVNNRSNGTGSSTASSATLT 91

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy TrEMBL
Match: A0A1S3CQ52 (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103503419 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.4e-30
Identity = 72/80 (90.00%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 5  VSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSSTTI 64
          +SLDGT NF+K+NDAIAAAPNFS TRFYIHVKPGTYQEIIEVP EKT IALIGDDSSTTI
Sbjct: 19 LSLDGTGNFVKVNDAIAAAPNFSMTRFYIHVKPGTYQEIIEVPSEKTFIALIGDDSSTTI 78

Query: 65 IVNNRSNGTGSSTASSATLS 85
          IVNNRSNGTGSSTASSATL+
Sbjct: 79 IVNNRSNGTGSSTASSATLT 98

[Close]

BLAST of CsaV3_4G016080 vs. ExPASy TrEMBL
Match: A0A6J1D863 (Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111018522 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.6e-27
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
           FN TVSLDG  NF ++NDAIAAAPNFST+RFYIHVKPGTY E +EVP +KT IALIGDD+
Sbjct: 29  FNITVSLDGMGNFFRVNDAIAAAPNFSTSRFYIHVKPGTYNEHVEVPAQKTFIALIGDDA 88

Query: 61  STTIIVNNRSNGTGSSTASSATLS 85
           STTIIV+NRSNGTG STA+SATL+
Sbjct: 89  STTIIVDNRSNGTGFSTATSATLT 112

[Close]

BLAST of CsaV3_4G016080 vs. TAIR 10
Match: AT2G26440.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14
Identity = 43/80 (53.75%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 5   VSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSSTTI 64
           V+ DGT NF  IN+AI+ APN S  R  I+VK G Y E I++P  KT I LIGD S  T 
Sbjct: 240 VAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTF 299

Query: 65  IVNNRSNGTGSSTASSATLS 85
           I  NRS G G +T  SATL+
Sbjct: 300 ITGNRSVGDGWTTFRSATLA 319

[Close]

BLAST of CsaV3_4G016080 vs. TAIR 10
Match: AT4G02300.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 1   FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
           +N +V++DGT NF  INDA+ AAPN S TRF I++K G Y E +E+P +KT I  IGD  
Sbjct: 220 YNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGI 279

Query: 61  STTIIVNNRSNGTGSSTASSATL 84
             T+I  NRS   G ST  + T+
Sbjct: 280 GKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of CsaV3_4G016080 vs. TAIR 10
Match: AT4G33220.1 (pectin methylesterase 44 )

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 1   FNSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDS 60
           ++ +V+LDGT NF KI DAI  AP++S+TRF I++K G Y E +E+  +K  I ++GD  
Sbjct: 211 YDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGI 270

Query: 61  STTIIVNNRSNGTGSSTASSATLS 85
             T+I  NRS   G +T  SAT +
Sbjct: 271 DVTVISGNRSFIDGWTTFRSATFA 294

[Close]

BLAST of CsaV3_4G016080 vs. TAIR 10
Match: AT4G02320.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 2   NSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSS 61
           N  V+ +GT N+  I +AI+AAPN S TRF I++K G Y E IE+P EKT I  IGD   
Sbjct: 207 NLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIG 266

Query: 62  TTIIVNNRSNGTGSSTASSATL 84
            T+I  NRS   G +   SAT+
Sbjct: 267 RTVIKANRSYADGWTAFHSATV 288

[Close]

BLAST of CsaV3_4G016080 vs. TAIR 10
Match: AT3G43270.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 2   NSTVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSS 61
           ++ V+ DGT NF  I+DA+ AAP++ST R+ IHVK G Y E +E+  +K  I ++GD   
Sbjct: 214 DAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGID 273

Query: 62  TTIIVNNRSNGTGSSTASSATLS 85
            T+I  NRS   G +T  SAT +
Sbjct: 274 ATVITGNRSFIDGWTTFRSATFA 296

The following BLAST results are available for this feature:

BLAST of CsaV3_4G016080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649408.1	8.0e-42	100.00	hypothetical protein Csa_023566, partial [Cucumis sativus]	[more]
XP_031745525.1	1.7e-36	98.81	probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]	[more]
XP_011654361.2	1.7e-36	98.81	probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus]	[more]
XP_031741746.1	4.4e-32	92.50	probable pectinesterase/pectinesterase inhibitor 39 [Cucumis sativus] >KAE864851...	[more]
KAA0040551.1	4.1e-30	91.25	putative pectinesterase/pectinesterase inhibitor 39 [Cucumis melo var. makuwa] >...	[more]

BLAST of CsaV3_4G016080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48711	2.1e-13	53.75	Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana OX=3...	[more]
O81415	2.1e-13	49.40	Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana OX=3...	[more]
O81301	2.0e-11	48.78	Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana OX=3...	[more]
Q9SMY7	2.0e-11	45.24	Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana OX=3...	[more]
Q9LXK7	2.6e-11	44.58	Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CsaV3_4G016080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNI2	3.7e-37	94.38	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G488760 PE=4 SV=1	[more]
A0A0A0L1M3	8.3e-37	98.81	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_4G260430 PE=4 SV=1	[more]
A0A5D3C2R6	2.0e-30	91.25	Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00440 ...	[more]
A0A1S3CQ52	4.4e-30	90.00	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103503419 PE=4 SV=1	[more]
A0A6J1D863	4.6e-27	78.57	Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111018522 PE=4 SV=1	[more]

BLAST of CsaV3_4G016080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26440.1	1.5e-14	53.75	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT4G02300.1	1.5e-14	49.40	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT4G33220.1	1.4e-12	45.24	pectin methylesterase 44	[more]
AT4G02320.1	1.4e-12	48.78	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G43270.1	1.8e-12	44.58	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 2..88 e-value: 1.6E-22 score: 82.3
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 3..84 e-value: 5.8E-18 score: 64.6
None	No IPR available	PANTHER	PTHR31707	PECTINESTERASE	coord: 2..85
None	No IPR available	PANTHER	PTHR31707:SF180	PECTINESTERASE	coord: 2..85
IPR018040	Pectinesterase, Tyr active site	PROSITE	PS00800	PECTINESTERASE_1	coord: 27..46
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 3..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G016080.1	CsaV3_4G016080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
molecular_function	GO:0030599	pectinesterase activity