CsaV3_4G016060 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G016060
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 10666778 .. 10669580 (+)
RNA-Seq ExpressionCsaV3_4G016060
SyntenyCsaV3_4G016060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAATTAGCTAGGTCAACAAATTAGCTACAGAAAAGCAATAAAGATTTTATCATCTACAAAATCTTCATAAAACATACATCTTCAATAAAAGATCTATAGATACTATCAAAACCAACACAAAATACAACAACAGTAAACAAAGTCTTCATATCTAAAATTTTACCAAGTCTTTCAACAATCAACACTTCCATTAAGCAAGCGAATCTTATAAAGAATTACAAATGGAGATCTAAACCTAATAATTATGAGAAACCACAAAGTATGATAAAATTGGCTCACCAAAGCGTTAGAACTACAAATTTGTTGTAGTGAGTTGAAAGATTTTGAAGACTTAGTACTATTCCACCTGCCATAGCAAACATCACATAAGGCCAATTATCCTGCATATAAGCCACACTTCACAACATTATAAACCTATTATTATTTACAATAATGTCTACATAAACCTATTTGTTAAGTGCAAATAATTGGAATAACCGCCACCAAAGTATGATGGTATAGTTGCAATTACACTTCCAAACTTTCCATCATAAAAATTGAACGCCCACAAATTTATACAATAAAACACCTACAAACGTGTATAATTTCTACAACTATGTAAGTCAAATTTTAACATTTTTGAGTTTGAAGGTTTTTAATTTTACCATATGACTATGGGTGTGGTTTTTGTAATTAATTTGTCCATTTTTAAAGATTGAGATGGTTTAAATCCCATTTTAGTTCTTAAACTCTTAGAAGAAAACTAATGTAGCACGTACTCTATTATTTTTCCATCTAATAACACTTGTCCAAATGTTTGTCATTAACTTATATATGACTACAAATTATGTTCGAATCGGCATGCTAGAACACATACTTGAAACTATGTCATTAGTAAGATCAAAATATCATATACTTTAAGAGCTTAAGTACTAAACTCACTAAAGGTTGGATAAGCAATCTCACTAAAGGTTGGAGAAGCAATCTCACCAAAGGTTGGAAAAAAGCGATCATTAAAGAAGAATAAAGTTCAAACAAAAGTTCTAGGTTAATGTCTAAACATCAGTCATCAGGTTTGATACCTTTAAAGAAACAATGTTACTATTAGATAACAACACAAATAAAAGACTAAATTAGCTATGGTTCCCAGTATTATTGATTATAAAGAGCTATCACATGTGACATACAAGAGTTTCACATTTCTCCATCATAAAAGTAAAATTTCGATAAATACAAACTTCACTTTATATCTTCAATAAAAAAATCAGAGGTTCAAATCCCCTGGCCAAAAGAAAAGAGTAAACTTACAACCAAAAGAGAAGGTATTATGTGAGATTTAACAAAATCTATCCAAATAAATGAAAAAAGGGAAGGTATTTGTCCAGCTGTTTGTATTCTACCTGTGATCAGAATTCAATAGTTTATATAACAATTAAGAGAAGTACTAAATTGGAGAGAAGCCAACTCCAAATGTGGAATCTCAACTTCTATAAACCACAGCCATTGTGTTCTAGTTTCTATAATGCACTCAATCCTTACAAACCGTGTGATGCCTAAATTCATTCCCAAGATGAAGTTTTAAACTCACAAGAATTTCCAAACACAAAACAAACACAACCTATAATATGAGTAAAAGATTTAGTAGAATTAAAATAACGCCAGTTTGTTACCATCAATCTCAGCTTTCACAGACTGCACACCTAAAGAATAAACAAAAACAAAAGCTAGAACCACATTAATGGTATCAGATTAATGTAATATAGAGCCTTGACGAAGAGATGAAAGAAGAGGAGATGGAAGATGGAGCCTGGAGGATAAGAGAAGTGCAAGATGATGGTGAGATGAGGATTTGATTGTCAAGGAAACTCATAGATATTAAGAAGAGGTAGAGTTTTTAAAACAATAATATGAGCAAATGAAAGTTTGGCCAAATGGTTCAAGATGAAACTATGCAATAAGGCCAAAAACAATCAGATAAGAAACCTGTGGGATATCTCAACACATAATATTCAACAAACACATATGAATATGATTTATATACAAACTACGAAAAATTGATCCAAACTTTAACCGATGCCAAGAAATTTCAATCTACAGAATCGAAGGTCAAAATATGAAAATTAGGCACTTCATTAGGGGTTTCTTTTTCAAAACCACAAACATGGACTCAATTAATTTGTTGTATAGAAATGGTAAGAAAGCGAAGAACAAAAGGAGGAAAAACTTGGACAAACCTTGAGGTTGAGGAGAAAGAAAATTTAGCGCGGGTCATTAATAGTCGTGGGTCGCCATCAATGCTGACATCAACCATTCCATCTCTTTCCACTCCTCCTCCACCATAATAAGCTATAAAACAAAGAAGAAGAAAAACCACAAACACCAAAACACTTCACTCACTGACCTCGAAAATGGAACGATAAGAACCTCATGAAAAATAGAAGTGCGTGGATCGTCGTCAAATTGTGAACTGAGTAGGTGGTTGACCGAAATGACGTGGGTGGTCGCCGTTATATTGAGAAACTGATTAGTATGGCCGACTGAAATGTTGTGAGTCGTCGTTGATGAGAAATGGAGTAGTGACGTGGCCAGGACGTGCTTTGTTTCGAGCTTCGTGGTTCACCGTCGATGAGATGTATGGCCGGTCGTTGGACGTGAAGATGGAGAGGATTGAAATCGGGGGTGGGATTTTGGGACTTTGTGGAGATGGGGATGAGGTTTTGGAACTCTGGCGGAAAAGTAATTATGGCATCTTAGAAATTGGAGAAAAAAATATTTGAGGAAAAAATGTGGAAAAAGTGTGTTTTCACAACACTGAAGTAAAT

mRNA sequence

ATGAGAAATGGAGTAGTGACGTGGCCAGGACGTGCTTTGTTTCGAGCTTCGTGGTTCACCGTCGATGAGATGTATGGCCGGTCGTTGGACGTGAAGATGGAGAGGATTGAAATCGGGGGTGGGATTTTGGGACTTTGTGGAGATGGGGATGAGGTTTTGGAACTCTGGCGGAAAAGTAATTATGGCATCTTAGAAATTGGAGAAAAAAATATTTGA

Coding sequence (CDS)

ATGAGAAATGGAGTAGTGACGTGGCCAGGACGTGCTTTGTTTCGAGCTTCGTGGTTCACCGTCGATGAGATGTATGGCCGGTCGTTGGACGTGAAGATGGAGAGGATTGAAATCGGGGGTGGGATTTTGGGACTTTGTGGAGATGGGGATGAGGTTTTGGAACTCTGGCGGAAAAGTAATTATGGCATCTTAGAAATTGGAGAAAAAAATATTTGA

Protein sequence

MRNGVVTWPGRALFRASWFTVDEMYGRSLDVKMERIEIGGGILGLCGDGDEVLELWRKSNYGILEIGEKNI*
Homology
[Close]
BLAST of CsaV3_4G016060 vs. NCBI nr
Match: KGN54005.1 (hypothetical protein Csa_004601 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 1.6e-34
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MRNGVVTWPGRALFRASWFTVDEMYGRSLDVKMERIEIGGGILGLCGDGDEVLELWRKSN 60
          MRNGVVTWPGRALFRASWFTVDEMYGRSLDVKMERIEIGGGILGLCGDGDEVLELWRKSN
Sbjct: 1  MRNGVVTWPGRALFRASWFTVDEMYGRSLDVKMERIEIGGGILGLCGDGDEVLELWRKSN 60

Query: 61 YGILEIGEKNI 72
          YGILEIGEKNI
Sbjct: 61 YGILEIGEKNI 71

[Close]
BLAST of CsaV3_4G016060 vs. ExPASy TrEMBL
Match: A0A0A0KWQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G259430 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.8e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MRNGVVTWPGRALFRASWFTVDEMYGRSLDVKMERIEIGGGILGLCGDGDEVLELWRKSN 60
          MRNGVVTWPGRALFRASWFTVDEMYGRSLDVKMERIEIGGGILGLCGDGDEVLELWRKSN
Sbjct: 1  MRNGVVTWPGRALFRASWFTVDEMYGRSLDVKMERIEIGGGILGLCGDGDEVLELWRKSN 60

Query: 61 YGILEIGEKNI 72
          YGILEIGEKNI
Sbjct: 61 YGILEIGEKNI 71

The following BLAST results are available for this feature:
BLAST of CsaV3_4G016060 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54005.11.6e-34100.00hypothetical protein Csa_004601 [Cucumis sativus][more]
BLAST of CsaV3_4G016060 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G016060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWQ67.8e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G259430 PE=4 SV=1[more]
BLAST of CsaV3_4G016060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G016060.1CsaV3_4G016060.1mRNA