CsaV3_4G014710 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G014710
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 10174851 .. 10175014 (+)
RNA-Seq ExpressionCsaV3_4G014710
SyntenyCsaV3_4G014710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCGTGGAGTAGAGGTTTCCTCGTACGCACCAAATCCAGAAGGAGTGGAAATAACAAAAAGAGGTTCGGAAGTTGTTTTGTCGAATAGATCGCCGACACGTCGCTCACGGTGCCCTAGAAAAGAGAATTTATCCGCTGTTGCCATTTCTAGGATGTCCAC

mRNA sequence

ATGAGGCGTGGAGTAGAGGTTTCCTCGTACGCACCAAATCCAGAAGGAGTGGAAATAACAAAAAGAGGTTCGGAAGTTGTTTTGTCGAATAGATCGCCGACACGTCGCTCACGGTGCCCTAGAAAAGAGAATTTATCCGCTGTTGCCATTTCTAGGATGTCCAC

Coding sequence (CDS)

ATGAGGCGTGGAGTAGAGGTTTCCTCGTACGCACCAAATCCAGAAGGAGTGGAAATAACAAAAAGAGGTTCGGAAGTTGTTTTGTCGAATAGATCGCCGACACGTCGCTCACGGTGCCCTAGAAAAGAGAATTTATCCGCTGTTGCCATTTCTAGGATGTCCAC

Protein sequence

MRRGVEVSSYAPNPEGVEITKRGSEVVLSNRSPTRRSRCPRKENLSAVAISRMSX
Homology
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BLAST of CsaV3_4G014710 vs. NCBI nr
Match: KAE8649385.1 (hypothetical protein Csa_011841, partial [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-19
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MRRGVEVSSYAPNPEGVEITKRGSEVVLSNRSPTRRSRCPRKENLSAVAISRMS 55
          MRRGVEVSSYAPNPEGVEITKRGSEVVLSNRSPTRRSRCPRKENLSAVAISRMS
Sbjct: 1  MRRGVEVSSYAPNPEGVEITKRGSEVVLSNRSPTRRSRCPRKENLSAVAISRMS 54

The following BLAST results are available for this feature:
BLAST of CsaV3_4G014710 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649385.11.1e-19100.00hypothetical protein Csa_011841, partial [Cucumis sativus][more]
BLAST of CsaV3_4G014710 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G014710 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G014710 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G014710.1CsaV3_4G014710.1mRNA