CsaV3_4G013410 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTAGTCAACTTTTTCGACTTCATATATTGACCGTTGAAGAAGAAAATTGTATCGGATGACAAAAACATTTAAAAAATATTTAATTACATATTTTAAAAAATATAATAAATAATTAATGATATTAGAGAAAGTATATTTGAACTTAACAAAAAAAACTATTGCATTTTAACATTACTAAATGTTGTTACCATTTTCTTTTACAAAGGCTGGAATTCTAGAAGATTCGGAGAAAATGATACGCGGTTCCTCCTCATTGGTTATTCTGTCATTTATATTCACCGGCAGTCGGTGACGTGCCTCTCCTCACCTGAAGAACTCCCAACAGATCGGAAAATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAAGTATGATCGATTCGTTCCTCGATCGCTTTCAGTTTTCGCCTTAATTTGTAATTAGAGTATTTGATTTTTTTAATTTCTTCCTTACAATTCGATAATTTAATGGTGTTGGTGAATCGTGAACGTTTCAGCACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTAAGATTTTCCCCTGATTTTATTGCCACTTTTTGTTGGAGTTCATCTGGAATTGGAGTTTCATTCATATGATAGAATGAATGATTTTGATGAATTGAAAATGCCTTTTAGAATTTGACCAACAACCCATTTAATCCTTATTAGTTTGTGATGTTGGAGAATTAAAAATGTAATATACTATTTTCAATTTTTTTTAAAAAAAATTCTCATACGAATAAAACATTAGTTTAAAATTTATATGACAAATCAATCATACTATCAATTTATAAAAAGAAAAGTTAAGAAAAAAAAAATGATAAGTGTTTCAGACACGCTTTTCTAAAGATGCATAGTGATTCTAAAACCGGATCGGATTCTACAACTCATCACGTTTATTTATTAATTAATTTAGGGTTCAATTTGTTTTTCTTTTTTTATTCTAAGAAAACAATTAGTATTCTATTAACGTTCTTGATTAAAATGACTTTAGTTGGTGGAAATGGAAGATATAAATGTGTAGGTGGGTCATGTATGAGTTTGTCCGTTGTAACTATTTCTTCTCTTTAAAAAGTTCTGATTAAAATGAAACATTTTTCATTTTGTTATTATTTCTTGTTGCTATTTGTGGGGTTCGGTGGGATTTTTAGGACTTCTTTTACTGTACGTAATCATTTGAAAAGAAAATGATATTATTTTTTATAAATTGTGTTTAACACACATGCTTTATGAACTTCCTTGGTCTCTCATTTTCATTTAAAAATTTGTAACTCTAATCCTTACCTTGTAAAATCTCATCATATTAATGCCAATTTTTATAATTCGACAGGTTACTATATTTTGTACAATTGAGAGTAAACCGAGTCATGATAAAGTTTTATAGACTAAATTGTTGCTAAGTTGAAAGTATAGAGATTGAATTGTTTGGTTCAACAACTGAAAGTTACTTATATTTAGTCTTTTTTTATTTGAGTTTGAATGCTAGTTTTATAATCTATTATTTGATTTTGTTTTGGTTGGGTTATGATGTTCAAGTTGCCTGGATCTGGGCATTCTCTCTCACCAAGTTCTAGGGTTGCATCTTGTTATACGGTTCCTTAAATTCTGGTTCAAGAAAGGTCACAATGGGGAGTAATAGAACCTGAAGACGCAATCATGCCGAGTTTTGTCTTGGTTGATTATGATTGGTGTCCTTTTCGGTATTCATACTGTTTTTATTCTTTCATTTTTGGTTAAACATGTCCGATTGAAACAGAACTGTGGAACTTTGTTTGATGTTGGTTTTGTCCTGGAGAAGGACATTAAATATTCACGTTGTGAAAATGATATATCAATTTCAAACTGACTGAGTTTAAAATTAAAACCGGCTGAGGTCAAAAATAAAAATGCAGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGTAAGTGCTTTCAATTTAATACTATGGTTAGACATCATTCTCTTCTGTTCATCTTGCTGTTACTGACTCTTGATTTCTGGATCTCATGCCAAATCAATGGGTTCTATTGCTCAGTTTTATATTTTTGAATTCTAAATTTTTGAATTCCCCCACCCTGATCCTTTAATACCCTGTTAAACAAAGATTTCATGTTGAAAAATGATAGATCAAAGGATTGGGGCAAGAGGTGAGGTTTTTTAGTTTAGAGAGTTGCTGACATAAATGAGCTATTTAGACGCAAGTCCAACGAGTAAGGTGTTAAGGAGTTGATAAGTTATGGAAGTGATGTTTTTTAGTCGTGGGATTCATGAACTCTTTGGACAGAGTAAGGTTTTGTTTTTGACCTATTTGTCTTTTCAAATAATTTTTAAAGCTACAACATCGAAAAATAAGATGAAAGAATATACATACATACAAAAAAAAAAACCTCCATAAAAAGGGGAGCTCCCTTTCCAAGAAGGAGCTTCAACCATGCAACAAATATGTATTGGTAATTATTAAAGTCCATCGAAATTAAAGTCCAAAGAGAAACATGAAAACAAACGAGGGACTGAACATACAAAAGGTCCCTATCCACGCCCCTAAAGATTCTCTTATTTCATGCCTTCCCAATACACCATAGAAAACAACATTTCCTCCCAAAATGTAGAATTAAGCAGAAATTCCTTGATAATAATAACATGGACATATTTGTGTCGAGCATCATCAAACCAGGAAGAAATGATCCCAAACTCCAAACTCACAACCCTAAAAATATGGTCAGGTTTTATAATATTTAGACCTTTATCCGGATATTAATATGGTTCAATTTAACATACGCTCTTAGTCAACTAGGAAGTCGGCAGTTCAAATCTTTTAGATTAGATGTTAAAATTTTAGAACCCAGGTTAAAAATTAACAACTTCTTCTTCTTATTTTTAATTGGGTACAAACAGGAGGATGTGATGAAATGAAGGGGATGCTATTGTATGCAATGGAGTGTTGTAATAATGTGATGTTGAGAATAAATTAAAGGTATTCTCTTGGATTTGAGAAGAAACCATGTTTGTTGTTCATGACAAATTGGAAGTGTGGAGGCATCAATCAAAAATATACTTTTTGCTTTTGCTTTTGCTTTAGATTTAGCTTTAGCAATTAGCATTATTGGATTTGGATGGCTTTTACTTTTCACTCACAATATCCTCAACTATGTTTATTCCACATTCTCTTCATTTCAACCAAACTTACTGTGAAATTATGTATCTTCTTCTGTTCCATTTGATGATAATGATAGTAATTATATTATGTCCATATCCTATTTGTGTACTTTGATCTTTTTTAGATTTTAATTTTATTGGCAACTGCTTACATCGGTTGATAATTTGTGTTTTCTTAAGAGTATAAAATTAAACTGTAGAGTGAAAATCTGAAATTTGACTTTTCAATTGAAGATTTAACGTTTTTAATTAATTGCCATGGTCTTTCTTTCTTAGAAGTTACACCTTGGTCATTTCAAAAGTTTGAGCCATTAGATGTTTGAAAATGAACTAAGTTTTGCTTTAGATTCTGTGATTATTACTTTATCTTACATTAGTTAATTCATTTAACTTTGTCAAAATATTAAACTACATTTGAGGCATTAGATAGATATTAATTTAATTTTGATGGTTAATTTATGAGAATGTACTCTAAATTTTAGATATGATATAGAGATGGAAGTGTTAAAAAAGAACCTCAAGTCCTATATATAACATAATTTACTCAGTCACCCCTTAGTTTTGCTTATTATTATGATAATTACCAACTTCTTTTTATCATAGGTTTTTACACTTTTGAGTAATATGGTATTTAATTTTGGTTCGTGTCTTGATATTCTTACAATTATTTGAGTTTTGACAGTGAAATCATTATTTTCCTTCTACTTTTGAAATATTGGCAAAACATAATAAAATAATCAATTAAAATTTCCTTATATATCTCTTGAAAAGTTTATGCAGGCATAACAAGTTAATGGTTGTATAATACAACAAAACTTTAAAATGCCTTTTTGTATTATATTCATGTGTATATATGTATGTACGTATGTAGGTATGTATATATTTTTTTTGAATGTTTTGTCTTCAAATATGTAAAATGAGTTAACATATTTATATATGTTAATGTAACAAAACATCTTCAATAGATATTGGTAGCTTGTTTCTCGTGCAGGGGCGTATTTAGGATTTTACGTAGGGACCTCGATTCATATAATATAACTTTAGATGTGTTGATAAGATGTTTAAGTAAGCTAATATTGTCATAATTAGCTAGTATATGGGTAATGGTTGATCTAGAATTTCATTTTAGGGGCACAACGTTTTTATAAGTGTAAAATTTTAGTGTTTGTGTAATATGTAGTTTTCCAATATTAGATTTGTTCATCTAATAGTTTATAGTATAGGTGTTCTTAGAAAAAGAGATATTAGTAAAGTAAATAACAAACCAAAATATTTATATTTGAAAATGAAATTTGTATGTTTTAATTTTTTAAAAATAAAAATTGATATTAAGTTCCTAATAACTTGGGCATTTTTAAAG ATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGA ATGGCCTTCCCCTTTCACCACCACCACCGCCGTGACGACGATGAAGACGGCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCACACTCCGATCCACCGCCTCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCCAGACTCCTCCGCCGCCTCCACCGTCTTACGTTGACTACCAGTCCAATTTCTCTCCGGAACCGCCCGTTCCCAACTACGGATACTCCTCTGGACCCCCGCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCAGTCCGATTCTCCCTTCTCCAACAGACCAACAGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCAATCCGCGACGGCAAAGTCGTACTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTTAATAAGGCCACCGGTCAGGCGATGAAACATTCCATCGGAGCTTCTCATCCGGTTCAGTTGACACGTTACGAACCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAGATATTCTGGTGGAATTCATGACGGCACCCATATTGTTCTGTGGAAATGGAAGGAAGGAGAAAACCAACTATGGAAGATCGTACCCTACTGA MAFPFHHHHRRDDDEDGEPPYPPPGHRPPHSDPPPPLVPHIHHHTHYGQTPPPPPPSYVDYQSNFSPEPPVPNYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHQSDSPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSIGASHPVQLTRYEPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDRYSGGIHDGTHIVLWKWKEGENQLWKIVPY* Homology
BLAST of CsaV3_4G013410 vs. NCBI nr
Match: XP_004147526.1 (ricin B-like lectin R40G3 [Cucumis sativus] >KGN53954.1 hypothetical protein Csa_021593 [Cucumis sativus]) HSP 1 Score: 560.5 bits (1443), Expect = 8.0e-156 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. NCBI nr
Match: XP_008441967.1 (PREDICTED: extensin [Cucumis melo]) HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147 Identity = 250/266 (93.98%), Postives = 257/266 (96.62%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. NCBI nr
Match: XP_038881782.1 (ricin B-like lectin R40G3 [Benincasa hispida]) HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136 Identity = 237/264 (89.77%), Postives = 250/264 (94.70%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. NCBI nr
Match: KAG6603498.1 (Ricin B-like lectin EULS3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 439.5 bits (1129), Expect = 2.0e-119 Identity = 210/279 (75.27%), Postives = 236/279 (84.59%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. NCBI nr
Match: KAG7033678.1 (Ricin B-like lectin EULS3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 439.1 bits (1128), Expect = 2.7e-119 Identity = 209/279 (74.91%), Postives = 236/279 (84.59%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. ExPASy Swiss-Prot
Match: Q945P1 (Ricin B-like lectin EULS3 OS=Arabidopsis thaliana OX=3702 GN=EULS3 PE=1 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 4.7e-66 Identity = 147/314 (46.82%), Postives = 185/314 (58.92%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. ExPASy Swiss-Prot
Match: Q6Z4N4 (Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G3 PE=2 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.6e-58 Identity = 105/189 (55.56%), Postives = 134/189 (70.90%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. ExPASy Swiss-Prot
Match: Q6Z4N6 (Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G2 PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.9e-53 Identity = 90/165 (54.55%), Postives = 119/165 (72.12%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. ExPASy Swiss-Prot
Match: Q10M12 (Ricin B-like lectin R40C1 OS=Oryza sativa subsp. japonica OX=39947 GN=R40C1 PE=1 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.7e-52 Identity = 93/178 (52.25%), Postives = 127/178 (71.35%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. ExPASy TrEMBL
Match: A0A0A0KYQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193240 PE=4 SV=1) HSP 1 Score: 560.5 bits (1443), Expect = 3.9e-156 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. ExPASy TrEMBL
Match: A0A1S3B4K8 (extensin OS=Cucumis melo OX=3656 GN=LOC103485969 PE=4 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 6.6e-148 Identity = 250/266 (93.98%), Postives = 257/266 (96.62%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. ExPASy TrEMBL
Match: A0A6J1ITL7 (ricin B-like lectin R40G3 OS=Cucurbita maxima OX=3661 GN=LOC111478294 PE=4 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 2.9e-119 Identity = 211/279 (75.63%), Postives = 235/279 (84.23%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. ExPASy TrEMBL
Match: A0A6J1GEM1 (ricin B-like lectin R40G3 OS=Cucurbita moschata OX=3662 GN=LOC111453449 PE=4 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 3.8e-119 Identity = 210/279 (75.27%), Postives = 236/279 (84.59%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. ExPASy TrEMBL
Match: A0A6J1DST7 (ricin B-like lectin R40G3 OS=Momordica charantia OX=3673 GN=LOC111023166 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.4e-118 Identity = 206/263 (78.33%), Postives = 229/263 (87.07%), Query Frame = 0
BLAST of CsaV3_4G013410 vs. TAIR 10
Match: AT2G39050.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 252.7 bits (644), Expect = 3.3e-67 Identity = 147/314 (46.82%), Postives = 185/314 (58.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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