CsaV3_4G013360 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAACGATCGAAAGCATTATTCAAATCATCCACACAGTGAAATATTTCCTTATAAAATCGGGAGTTAGGTGGATGGCTCATCATCCATGAATATGATGAATTCTCAACAATACCTGTGATTCTCATCGTTCCCCATTTTTTTCTCACAATTTTCTCTTCTTATTCAACTTCCATTGATTTCGATTCCGATTCCTTTCTTCTTAATCGAACTAACCCAGATTCTGTACTTCACTGTTGACCTATTCCCCGCTCATTTCCCTTCTGCCGGCCAATTGCTTCTCCTAACCATGATTGATTCTATCAAGGCTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCATCTCTTGGGGTTCTCACTTCCGTTCTCTACTCAGCCGCCGGTGTTTATGGAATCCCACTTCACCCACTTCTTATCACTACTACTCTTGTTTTCATTCTTGTTTTTGTTTTTAATATAATTGGTGCTCTTTTGGGTGGAGCTAGCTTTAATCCTACTGCCACTGCTGCTTTTTATGCTGCTGGTGTTGGTCCAACCTCTCTCTTCGCCATGGCTATCCGTTTCCCTGCTCAGGTTAGCCTTTTTTTTTGTTTTTGGGCTTTGGTTTTAGTTTTGGTTTTTTTTCCATCTCTCTGCTTAACTGACTGTGAAATTTTGTGGGTTGTTTCGATTGGTTTGAATTTTGACCTGTATTATCTATAATCTGTGGGTAGGATACTTGATGTAATGTGGGTTTTGTTTGTGTGTTGGGTGTCTTCAGTTTTCTTTTCATGTTGCCTCTTGAGAGGTGGATTGGTTTTCCATGTTCGGGTTTGGATTGAGAAAGCTGAGTTGAGTGTTGTCTTTTGAGTAATGATTGAGGTAGAAAGATTGTTGTATGACTAAAACGGAGTTGATGGTGTATGATGATTAAGAAAGAAGGAAAAAGGAGAATTTTTTTTATGGATATTGAACTAGGGCTAAGGTAAATAATTTTGTATGCTTAATAAAATGCGTTGCTTTTTTGCTCTGGGGGAGGAAGCCTTCCAAACTTTCAATATATATGAATTTTCAATTAAAGAAATTCAGGCCAAATGAGAGGAACTACTTGTTGACCGATCCATTATGCCTACATGGAATTTAATATTCTAAAAATTTCTTTAACACTCAAATGTTGTGGGGTTGTACCGTGGGGTCTTAAGGTGGTCTAAACACTCACTGTCGCAGATATTAAAAAAATTACTGACTGTTATTATCCTTTTTTTTTCTAAGTTCTATCAAGGATTTAGGAAATCAATGTAATGAAATATTGTTGGTTGAGGACTTTTGCATATCCATTTTCCTTCAGCTCGAATTAAATGTTTTCTTTTTTAAGAATGGTATTATATGCTGAATTCATTGTTGGTAGGCGGCTGGTGCGGTTGCTGGTGCCCTGGCAATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGACCTTCTTTGAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGGGGTCCCTCCAGCCCTGTTATCAAAACATGGTTGCTGGCAATGGCTACCGTAGCGTTAATCGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGTGAGTTCACCTCTTCTAGTAATCTTTTATACTCTACTTGTTCTGATTGATTATTATTATTGATAACTTGTTCTGGTTTAAATCCTTCGTGGATGTATTTTGTGTGCTATTGATGCGACAGCCTATTTGTAGCTGCTTGCTTTGCTTAGACTACTAACTACTATTAACATTTGAAGATCTTCATGTTTTTCTGTTTTATATAAACACTTGCTCTATTGTTGCTTTGCATTTTTCTTTTGGCACTGAAATTGCATAACTCTGGTGTGTTTGTGTTCCAAAAGACCAAAATACATTTTTGAACAAACATCATTTAGGGCAAAAAGTTAAAATGTAATATAGCAAGTTATTATAGTTTAGCAAGTGGTTTGCTAAAGCATTAATTGTGATTAGTATGCTTCACATCTACTCCTATGTTTGCTTGCCGTTTTTATTTCGAAACATGATAATGGATCAATTAACAATATTTTGTGGGTGCGTTGAGCTTATATTGCTCCTTACTTCCATGATCTATCTCTATTTTATCTCATGCATAATTGCAGGAACACTTTTTACTAATTTGAATCATGTTAGTTATTTTTGTGACTTATTTTACGTGGTTAAAAGTGTTCTAATTTGAATTAATTATTAATTTTTGCTAAATTAAGAACTTTTCCTTTTCCTTAGGTTTATCTTGAAAAACCATAATTTTCCATATCAATTCCAAGCATCTTCACCAATGCTTAACTGTATTTTCCCACAACATTTCAACTTTCCTCTGTTTATTTCACATGTCTTCTGCCGAGCTGGCAAATTCTAGGATAATGTAAAACTCTGAAGGATAGCATTATAACATATTGAACTAATGGGGCAAAAGGAAAAAAAGTAGGAGAGTCTTGATCTTCCCATCTTTTTATCTAAGCCAACGCCAGTTTGGATTTGAAAGTATGTTTGGCTACCTAGTTTGCAATATATCTGCCAGGTTTACAACTCACTTAGACTTCACACAAAACTCAGTATACCTTTTTGGTTATCTTTTCACCCAAGATTAGTAACTGAACTTTATTTGTTACGAGAATCTCATAGCTGACGAAGATTTAAATTAGGAAAGAACTGAATAATTCCAGATGAACAAATGTTCCTTCTGTTCTTTCCATTGAATTTTGATGGAGTGACATGCCTCACCGCCACACGCCCATCATGGCTGTAACTTTGAAACCTAAACATCATGAAGTGTTTTTTGCCTAATTGGTTTTTAGCTACAATACTTAGCTCTAATCTGTAGACACAGAATTCTCTCAATCATATTTGTGGATAAATACTTCCACTAGTTTTTCTCTAGACACGTACTTTCTCTAACCTTATCTCCATCCACACATGCTTTTCTCCTCCATCTCTTTGAAACATGTACTACTTTTGTTAGTCCTATACGCCTACTCTACTGATCACTTTGTAGTCTTTACATACACGATCTCCTTAGTGTATGTCTTTTTTCTAACCATTCTGTCTTCGCAAGAGCTAACTTTTCCAAACAAAGATACTCCCAACAATTTCTCTGCATTCACTTGCTTTATAATTAACAAAATTCCCTTTTTAATAAATTATGAATTCTAAACGGCTTTTTGAAGTAGAAAAAAACATTAAAATCTTTTTGGAATAAAAAACCCTATTACATAAAATTTATTAAAAAGGATGAAAGCATGGTGAAGATGATATCAACTCATCCCGAGGACCAAATCACCTTGATCAAATATTTAATATCTACGCAAATATTGTAGAGAGAGACTCTTGTCTTACAAGATTAGTAGAGGTTGATGGTTTGAACTATACAATATGAATTAGCTTTGTCTCATTTGCAACAACTTCTGTTGCATGCATGCGTATTCGACTGACCCGTTTGTCTCCTTTGGTTCATCCCTTGGATATATAATGTTTGGTTGGTTCATGAACTGGGAAAAGCTGTGTTATGATTTTATGAACCCAAACCATATAAATGAAGGAGAAAACGATAGTTGTTATTTTCAATTTGACAAGAAAGCTGATCTCTTTTTTTTTTTGTTTTGAAATGCAGGCATTTGGATGGGCATATATAAACAACAGGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCTCCCCCTTTGTAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATGATCTTCCCACCACCACCCCCAGCCCCGGCCAAGCAGAAGAAAGCTTAAAACCGATAGTTAAAATGGTGGTGCCACCGTGTTTCTTTAGATAAGCTTTGATCAATAAAATGTAGCAAAGTAAGAGCTTCTAGTTGTGTTATTAAGGTAATTGTAAGTGTTTTGAAGTTTATATTTTGAAGCTGCCTCTGGATCAATAATCCTTCAATTAGATTCACCTTTAAATTAAAATTTCTTTAGGCAGTTATTGGTTGATTCTTATAATTATTTTCTTCAGGCTTGTTTGGATTATAACTTTTTCAAGTGCTTAAAAACCTTTGGACATTAGGTTTCTGCTAATAGCAACTATTTTTCTTTTGGTCAAATGCTTATTAAGGAATCCTCCATTATTCAAGCTAATTGGATTAGAAAACGATGGTAATTTACTGAAATTGTAAACCGTTTATTTATTTATTTTATATAACAACATTAATAACAATGATAATAATAATAATTTTT ATGATTGATTCTATCAAGGCTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCATCTCTTGGGGTTCTCACTTCCGTTCTCTACTCAGCCGCCGGTGTTTATGGAATCCCACTTCACCCACTTCTTATCACTACTACTCTTGTTTTCATTCTTGTTTTTGTTTTTAATATAATTGGTGCTCTTTTGGGTGGAGCTAGCTTTAATCCTACTGCCACTGCTGCTTTTTATGCTGCTGGTGTTGGTCCAACCTCTCTCTTCGCCATGGCTATCCGTTTCCCTGCTCAGGCGGCTGGTGCGGTTGCTGGTGCCCTGGCAATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGACCTTCTTTGAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGGGGTCCCTCCAGCCCTGTTATCAAAACATGGTTGCTGGCAATGGCTACCGTAGCGTTAATCGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGCATTTGGATGGGCATATATAAACAACAGGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCTCCCCCTTTGTAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATGATCTTCCCACCACCACCCCCAGCCCCGGCCAAGCAGAAGAAAGCTTAA ATGATTGATTCTATCAAGGCTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCATCTCTTGGGGTTCTCACTTCCGTTCTCTACTCAGCCGCCGGTGTTTATGGAATCCCACTTCACCCACTTCTTATCACTACTACTCTTGTTTTCATTCTTGTTTTTGTTTTTAATATAATTGGTGCTCTTTTGGGTGGAGCTAGCTTTAATCCTACTGCCACTGCTGCTTTTTATGCTGCTGGTGTTGGTCCAACCTCTCTCTTCGCCATGGCTATCCGTTTCCCTGCTCAGGCGGCTGGTGCGGTTGCTGGTGCCCTGGCAATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGACCTTCTTTGAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGGGGTCCCTCCAGCCCTGTTATCAAAACATGGTTGCTGGCAATGGCTACCGTAGCGTTAATCGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGCATTTGGATGGGCATATATAAACAACAGGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCTCCCCCTTTGTAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATGATCTTCCCACCACCACCCCCAGCCCCGGCCAAGCAGAAGAAAGCTTAA MIDSIKAAIGDAVLTSMWIFCASSLGVLTSVLYSAAGVYGIPLHPLLITTTLVFILVFVFNIIGALLGGASFNPTATAAFYAAGVGPTSLFAMAIRFPAQAAGAVAGALAIKEVMPIQYKHMLGGPSLKVDIHSGATAEGVLTFIISFAVLLIVLRGPSSPVIKTWLLAMATVALIVAGSSYTGPSMNPANAFGWAYINNRHDTWEQLYVYWISPFVGAILAAWLFRMIFPPPPPAPAKQKKA* Homology
BLAST of CsaV3_4G013360 vs. NCBI nr
Match: XP_004147529.1 (aquaporin SIP1-2 [Cucumis sativus] >KGN53949.1 hypothetical protein Csa_021584 [Cucumis sativus]) HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. NCBI nr
Match: XP_008441970.1 (PREDICTED: aquaporin SIP1-1-like [Cucumis melo] >KAA0060119.1 aquaporin SIP1-1-like [Cucumis melo var. makuwa] >TYK08433.1 aquaporin SIP1-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 459.9 bits (1182), Expect = 1.4e-125 Identity = 239/243 (98.35%), Postives = 243/243 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. NCBI nr
Match: XP_038881739.1 (aquaporin SIP1-1-like [Benincasa hispida]) HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-122 Identity = 230/243 (94.65%), Postives = 238/243 (97.94%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. NCBI nr
Match: XP_023518211.1 (aquaporin SIP1-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 439.1 bits (1128), Expect = 2.5e-119 Identity = 226/242 (93.39%), Postives = 237/242 (97.93%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. NCBI nr
Match: KAG6595512.1 (Aquaporin SIP1-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 439.1 bits (1128), Expect = 2.5e-119 Identity = 226/242 (93.39%), Postives = 236/242 (97.52%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy Swiss-Prot
Match: Q9ATM2 (Aquaporin SIP1-2 OS=Zea mays OX=4577 GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 6.8e-80 Identity = 150/243 (61.73%), Postives = 196/243 (80.66%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy Swiss-Prot
Match: Q5VR89 (Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIP1-1 PE=2 SV=2) HSP 1 Score: 296.6 bits (758), Expect = 2.6e-79 Identity = 146/245 (59.59%), Postives = 196/245 (80.00%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy Swiss-Prot
Match: Q9ATM3 (Aquaporin SIP1-1 OS=Zea mays OX=4577 GN=SIP1-1 PE=2 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 5.1e-75 Identity = 144/241 (59.75%), Postives = 190/241 (78.84%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy Swiss-Prot
Match: Q9M8W5 (Aquaporin SIP1-1 OS=Arabidopsis thaliana OX=3702 GN=SIP1-1 PE=2 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 1.1e-69 Identity = 137/243 (56.38%), Postives = 182/243 (74.90%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy Swiss-Prot
Match: Q9FK43 (Probable aquaporin SIP1-2 OS=Arabidopsis thaliana OX=3702 GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.6e-65 Identity = 129/243 (53.09%), Postives = 177/243 (72.84%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy TrEMBL
Match: A0A0A0KYP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192210 PE=3 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy TrEMBL
Match: A0A5D3C958 (Aquaporin SIP1-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00490 PE=3 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 6.5e-126 Identity = 239/243 (98.35%), Postives = 243/243 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy TrEMBL
Match: A0A1S3B5C8 (aquaporin SIP1-1-like OS=Cucumis melo OX=3656 GN=LOC103485971 PE=3 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 6.5e-126 Identity = 239/243 (98.35%), Postives = 243/243 (100.00%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy TrEMBL
Match: A0A6J1EBE8 (aquaporin SIP1-1-like OS=Cucurbita moschata OX=3662 GN=LOC111432502 PE=3 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.0e-119 Identity = 225/242 (92.98%), Postives = 236/242 (97.52%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. ExPASy TrEMBL
Match: A0A6J1ITM8 (aquaporin SIP1-1-like OS=Cucurbita maxima OX=3661 GN=LOC111478308 PE=3 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 2.7e-119 Identity = 223/243 (91.77%), Postives = 236/243 (97.12%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. TAIR 10
Match: AT3G04090.1 (small and basic intrinsic protein 1A ) HSP 1 Score: 264.6 bits (675), Expect = 7.8e-71 Identity = 137/243 (56.38%), Postives = 182/243 (74.90%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. TAIR 10
Match: AT5G18290.1 (Aquaporin-like superfamily protein ) HSP 1 Score: 249.6 bits (636), Expect = 2.6e-66 Identity = 129/243 (53.09%), Postives = 177/243 (72.84%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. TAIR 10
Match: AT5G18290.2 (Aquaporin-like superfamily protein ) HSP 1 Score: 249.6 bits (636), Expect = 2.6e-66 Identity = 129/243 (53.09%), Postives = 177/243 (72.84%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. TAIR 10
Match: AT3G56950.1 (small and basic intrinsic protein 2;1 ) HSP 1 Score: 112.1 bits (279), Expect = 6.4e-25 Identity = 76/238 (31.93%), Postives = 118/238 (49.58%), Query Frame = 0
BLAST of CsaV3_4G013360 vs. TAIR 10
Match: AT3G56950.2 (small and basic intrinsic protein 2;1 ) HSP 1 Score: 112.1 bits (279), Expect = 6.4e-25 Identity = 76/238 (31.93%), Postives = 118/238 (49.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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