CsaV3_4G011910 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G011910
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 9064963 .. 9065223 (+)
RNA-Seq ExpressionCsaV3_4G011910
SyntenyCsaV3_4G011910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGTTGGCATGATCTTCTTTCACAAATACCAGCCAGATGCTGGCTTCTGTGTTCAAATTATGCGAAAGAGCTGATACTTCTCTGTTGGCGTGATATCCCACTTAGTCTCGGGGCAAGCCACTTTCTTCAACGCACTCTCCAAGTCTCTCTTGGGGTCTTGAAAATATCATGTCCAATTTCGTTTGCCTCTAAACCAAAGAACTCATTGATGGCGTTTTGTCCAAAATCTACTTTTTGCCCTTTGACCATGGCATAA

mRNA sequence

ATGGCTAGTTGGCATGATCTTCTTTCACAAATACCAGCCAGATGCTGGCTTCTGTGTTCAAATTATGCGAAAGAGCTGATACTTCTCTGTTGGCGTGATATCCCACTTAGTCTCGGGGCAAGCCACTTTCTTCAACGCACTCTCCAAGTCTCTCTTGGGGTCTTGAAAATATCATGTCCAATTTCGTTTGCCTCTAAACCAAAGAACTCATTGATGGCGTTTTGTCCAAAATCTACTTTTTGCCCTTTGACCATGGCATAA

Coding sequence (CDS)

ATGGCTAGTTGGCATGATCTTCTTTCACAAATACCAGCCAGATGCTGGCTTCTGTGTTCAAATTATGCGAAAGAGCTGATACTTCTCTGTTGGCGTGATATCCCACTTAGTCTCGGGGCAAGCCACTTTCTTCAACGCACTCTCCAAGTCTCTCTTGGGGTCTTGAAAATATCATGTCCAATTTCGTTTGCCTCTAAACCAAAGAACTCATTGATGGCGTTTTGTCCAAAATCTACTTTTTGCCCTTTGACCATGGCATAA

Protein sequence

MASWHDLLSQIPARCWLLCSNYAKELILLCWRDIPLSLGASHFLQRTLQVSLGVLKISCPISFASKPKNSLMAFCPKSTFCPLTMA*
Homology
[Close]
BLAST of CsaV3_4G011910 vs. NCBI nr
Match: KGN53868.1 (hypothetical protein Csa_019153 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MASWHDLLSQIPARCWLLCSNYAKELILLCWRDIPLSLGASHFLQRTLQVSLGVLKISCP 60
          MASWHDLLSQIPARCWLLCSNYAKELILLCWRDIPLSLGASHFLQRTLQVSLGVLKISCP
Sbjct: 1  MASWHDLLSQIPARCWLLCSNYAKELILLCWRDIPLSLGASHFLQRTLQVSLGVLKISCP 60

Query: 61 ISFASKPKNSLMAFCPKSTFCPLTMA 87
          ISFASKPKNSLMAFCPKSTFCPLTMA
Sbjct: 61 ISFASKPKNSLMAFCPKSTFCPLTMA 86

[Close]
BLAST of CsaV3_4G011910 vs. ExPASy TrEMBL
Match: A0A0A0KWE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G172560 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.2e-43
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MASWHDLLSQIPARCWLLCSNYAKELILLCWRDIPLSLGASHFLQRTLQVSLGVLKISCP 60
          MASWHDLLSQIPARCWLLCSNYAKELILLCWRDIPLSLGASHFLQRTLQVSLGVLKISCP
Sbjct: 1  MASWHDLLSQIPARCWLLCSNYAKELILLCWRDIPLSLGASHFLQRTLQVSLGVLKISCP 60

Query: 61 ISFASKPKNSLMAFCPKSTFCPLTMA 87
          ISFASKPKNSLMAFCPKSTFCPLTMA
Sbjct: 61 ISFASKPKNSLMAFCPKSTFCPLTMA 86

The following BLAST results are available for this feature:
BLAST of CsaV3_4G011910 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53868.11.5e-42100.00hypothetical protein Csa_019153 [Cucumis sativus][more]
BLAST of CsaV3_4G011910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G011910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWE67.2e-43100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G172560 PE=4 SV=1[more]
BLAST of CsaV3_4G011910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G011910.1CsaV3_4G011910.1mRNA