CsaV3_4G011620 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G011620
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 8571472 .. 8571726 (+)
RNA-Seq ExpressionCsaV3_4G011620
SyntenyCsaV3_4G011620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAAGCGGCCACCGAGTCAACGAAAGCCCAGCCAAGGGGAAGGCATCAGAGGCCACATTGTTTTTCTATATGTGGTCAGTCAACGAAACCCACACCTACAGAGACACCAGAGATCGAAAGAGAAGAGGGGAAAACAACGTGCGGTTTAACAAAAATGGTGGAAGACAAATCGGTGTAGATGAATGTACTATGAAGAAGATGATGGTAAACCATGGAGAAATACTCAGTGAGTGGAGAAGACGAAAATAA

mRNA sequence

ATGAAAGGAAGCGGCCACCGAGTCAACGAAAGCCCAGCCAAGGGGAAGGCATCAGAGGCCACATTGTTTTTCTATATGTGGTCAGTCAACGAAACCCACACCTACAGAGACACCAGAGATCGAAAGAGAAGAGGGGAAAACAACGTGCGGTTTAACAAAAATGGTGGAAGACAAATCGGTGTAGATGAATGTACTATGAAGAAGATGATGGTAAACCATGGAGAAATACTCAGTGAGTGGAGAAGACGAAAATAA

Coding sequence (CDS)

ATGAAAGGAAGCGGCCACCGAGTCAACGAAAGCCCAGCCAAGGGGAAGGCATCAGAGGCCACATTGTTTTTCTATATGTGGTCAGTCAACGAAACCCACACCTACAGAGACACCAGAGATCGAAAGAGAAGAGGGGAAAACAACGTGCGGTTTAACAAAAATGGTGGAAGACAAATCGGTGTAGATGAATGTACTATGAAGAAGATGATGGTAAACCATGGAGAAATACTCAGTGAGTGGAGAAGACGAAAATAA

Protein sequence

MKGSGHRVNESPAKGKASEATLFFYMWSVNETHTYRDTRDRKRRGENNVRFNKNGGRQIGVDECTMKKMMVNHGEILSEWRRRK*
Homology
[Close]
BLAST of CsaV3_4G011620 vs. NCBI nr
Match: KGN53834.1 (hypothetical protein Csa_019124 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 3.6e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MKGSGHRVNESPAKGKASEATLFFYMWSVNETHTYRDTRDRKRRGENNVRFNKNGGRQIG 60
          MKGSGHRVNESPAKGKASEATLFFYMWSVNETHTYRDTRDRKRRGENNVRFNKNGGRQIG
Sbjct: 1  MKGSGHRVNESPAKGKASEATLFFYMWSVNETHTYRDTRDRKRRGENNVRFNKNGGRQIG 60

Query: 61 VDECTMKKMMVNHGEILSEWRRRK 85
          VDECTMKKMMVNHGEILSEWRRRK
Sbjct: 61 VDECTMKKMMVNHGEILSEWRRRK 84

[Close]
BLAST of CsaV3_4G011620 vs. ExPASy TrEMBL
Match: A0A0A0KYB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G161820 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.7e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MKGSGHRVNESPAKGKASEATLFFYMWSVNETHTYRDTRDRKRRGENNVRFNKNGGRQIG 60
          MKGSGHRVNESPAKGKASEATLFFYMWSVNETHTYRDTRDRKRRGENNVRFNKNGGRQIG
Sbjct: 1  MKGSGHRVNESPAKGKASEATLFFYMWSVNETHTYRDTRDRKRRGENNVRFNKNGGRQIG 60

Query: 61 VDECTMKKMMVNHGEILSEWRRRK 85
          VDECTMKKMMVNHGEILSEWRRRK
Sbjct: 61 VDECTMKKMMVNHGEILSEWRRRK 84

The following BLAST results are available for this feature:
BLAST of CsaV3_4G011620 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53834.13.6e-41100.00hypothetical protein Csa_019124 [Cucumis sativus][more]
BLAST of CsaV3_4G011620 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G011620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYB01.7e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G161820 PE=4 SV=1[more]
BLAST of CsaV3_4G011620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G011620.1CsaV3_4G011620.1mRNA