CsaV3_4G010420 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAAGTTCAAGGCACAGGCCTTTGCCTTCTTGTGGTGGTGGCAATATTTCTCTCCAGTGTTCGTCTGGGTGAGGCGGTGAGTTGCAATCCGACGGAGCTGAGCCCTTGTGTGAGTGCAATCACATCATCAACTGCACCGACGGCTGCTTGCTGCCAGAAGTTGAGGCAACAAGAACCATGCTATTGTGGGTACCTAAAAGATCCAAAGTACAAAGCTTATGCAGAATCTCCTCGTGTTCGGGCCATTGCTTCCCAGTGTCGTGTCCCTATCCCTAAGTGTTAG ATGATGAAAGTTCAAGGCACAGGCCTTTGCCTTCTTGTGGTGGTGGCAATATTTCTCTCCAGTGTTCGTCTGGGTGAGGCGGTGAGTTGCAATCCGACGGAGCTGAGCCCTTGTGTGAGTGCAATCACATCATCAACTGCACCGACGGCTGCTTGCTGCCAGAAGTTGAGGCAACAAGAACCATGCTATTGTGGGTACCTAAAAGATCCAAAGTACAAAGCTTATGCAGAATCTCCTCGTGTTCGGGCCATTGCTTCCCAGTGTCGTGTCCCTATCCCTAAGTGTTAG ATGATGAAAGTTCAAGGCACAGGCCTTTGCCTTCTTGTGGTGGTGGCAATATTTCTCTCCAGTGTTCGTCTGGGTGAGGCGGTGAGTTGCAATCCGACGGAGCTGAGCCCTTGTGTGAGTGCAATCACATCATCAACTGCACCGACGGCTGCTTGCTGCCAGAAGTTGAGGCAACAAGAACCATGCTATTGTGGGTACCTAAAAGATCCAAAGTACAAAGCTTATGCAGAATCTCCTCGTGTTCGGGCCATTGCTTCCCAGTGTCGTGTCCCTATCCCTAAGTGTTAG MMKVQGTGLCLLVVVAIFLSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPCYCGYLKDPKYKAYAESPRVRAIASQCRVPIPKC* Homology
BLAST of CsaV3_4G010420 vs. NCBI nr
Match: KGN53813.1 (hypothetical protein Csa_015036 [Cucumis sativus]) HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. NCBI nr
Match: KAA0064158.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02871.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 183.3 bits (464), Expect = 9.6e-43 Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. NCBI nr
Match: KAG6581741.1 (hypothetical protein SDJN03_21743, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581744.1 hypothetical protein SDJN03_21746, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 128.3 bits (321), Expect = 3.7e-26 Identity = 60/96 (62.50%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. NCBI nr
Match: KAF7130843.1 (hypothetical protein RHSIM_Rhsim10G0072400 [Rhododendron simsii]) HSP 1 Score: 110.9 bits (276), Expect = 6.1e-21 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. NCBI nr
Match: KAG5527976.1 (hypothetical protein RHGRI_028790 [Rhododendron griersonianum]) HSP 1 Score: 110.9 bits (276), Expect = 6.1e-21 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 7.0e-20 Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 9.4e-17 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.0e-15 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.3e-13 Identity = 33/94 (35.11%), Postives = 48/94 (51.06%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-12 Identity = 30/67 (44.78%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy TrEMBL
Match: A0A0A0KW80 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141210 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 5.9e-46 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy TrEMBL
Match: A0A5D3BT00 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00780 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43 Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy TrEMBL
Match: A0A6J1E135 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111024980 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.8e-21 Identity = 55/98 (56.12%), Postives = 67/98 (68.37%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy TrEMBL
Match: M5WX74 (AAI domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_3G147800 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. ExPASy TrEMBL
Match: A0A4Y1R5X5 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Prunus dulcis OX=3755 GN=Prudu_009300 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20 Identity = 53/98 (54.08%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 92.8 bits (229), Expect = 1.6e-19 Identity = 39/96 (40.62%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 92.4 bits (228), Expect = 2.1e-19 Identity = 40/95 (42.11%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 6.3e-16 Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. TAIR 10
Match: AT5G38195.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 2.6e-14 Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 0
BLAST of CsaV3_4G010420 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 5.0e-13 Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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