CsaV3_4G010140 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G010140
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionTransposon Tf2-12 polyprotein
Locationchr4: 7934886 .. 7936646 (+)
RNA-Seq ExpressionCsaV3_4G010140
SyntenyCsaV3_4G010140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCAAGAGCCAAACTTCGAAGGCTGCACCACACAGGTAACATTCTTGACTATGTGAAAGAATTTACCACTCTCATGCTTGAAATCAGTGATCTGCCCGTAAAGGAAGCCCTATTCCAATTTAGAGACGGACTGAAGGATTGGGCTAAAGTTGAGCTAGACTGTCACAATGTCCAAACATTGGACGACGCTATAGCTGCAGTCGAGATGCTTGTTGATTTTACTGCTCAATCAAAAGAGAGAAAGCCTAGTCCAAATAAACGTGAAGGCAATCGCCATAAGCATAAAGACTATGAGCAAAAAGAAAAGAAAAAGAAGACATTCCACAAACATGGCAAGTATAACAATACTCAATGAGGTGAGTCGTTGAAACCCTCTTCTCCATGTTTTGTTTGTAATGGCCCCCATTGGACAAGAGACTGTCCAAATAGAAAAGCAATGAATGCACTCATTGCTAAATTGCTTGAGTCGAAACAAGGAGAAGATATGCCACAAATTGGATCCTTGCAACATATCGGAGCTCTAAAGCAGGCCAAGCAAACAACCAAAAGAGGCCTACTCCATGGAAATGTAAATATAAATGGGAGAGAGGCTATTGCCATGTTTGACATAGGCGCGAGCCACAACTTCATGAATGTGCATGAGGCCAAGAGACTAGGCCTCAAGTTCGCGAACGAGAAAGGGACTGTAAAAGCGGTAAACTCGGAAGCAAAGGCCATTAAAGGCGTAGCAAGAGGTGTGATGGTCAAAATTGGCGATTGGCAAGGTAAACTTGACTTCACCGTGCTACCCATGGATGATTTTGATATTGTGCTTGGCCTAGGGTTCTTTGACAGGGTAATTGCTATCGTTGATTCTTCTTGGTGTACCCTTACAATAGTGGATGGTAAAATAACAATCATCCCACTAAAGAAGGGAAAGTCGGTGATCAGACAGTCAACCATGTAGAACAAGAAAGAAGTCACTAACACTCAATGCCAGGTAGTTACCCCAAAAGGAATATCGTCGAAGGAGAAAGGTTCTAAACCTATAGTCCCAAAAGCACACAAAGTACTGGAGGAAAAGAAGGACGCTATTATGATGACTGTGTTGCCAAGAAAAGAAGACCAAGAGATCGAAGCGAAACCATGCAACGCCAATGCAGTCGATGACGTCGCAAGCCAGAAAACCGAACTGGCTGCTATAACTACAAGTATGCCCAAAAGTGACTTCCTCGACAAAATCAAGGAATGGTGCGAAGAATGTGACATATCAAGGGCATGCTTGGCAAAGGCCGCCACTAAGATGAAGAAGTGGGCGGACAGGAAAAGGAGGCTCAAAGAGTACCAAGTAGGGGAAAAAGTAATGGTAAAGCTGCTACCTAACCAGTTCAAATCCCTACGCAAGGTACATAAGGGCTTAATTCGAAGGTATGAAGGGCCCTTCTCTATCATCAAGAGAGTGGGAAAAGCAGCTTACAGATTGGAACTTCTTCCCAGATTGAAGATCCATAATGTCTTCCATGTGAGTATGTTGAAGCTCTTTTATGAAGACAAAGAGGATCCGAGCATAAGTGAATCCTCTCGTGCACCTACCTGCATGATCTCAGAATTCAACAGAAAAATCAAGGAGATCTTAGTAGAGAGGAAGATACGAAGGAGAGAAGTTCCCAGTTATAACGAATATCTCATTGCTTGGGAAGGACTACGAGAGAACGAAGCAAGTTGGGAAAAGGAAGACACCCTGTGGCAATTTCAAGATGAAATCAGAAGATTTTAA

mRNA sequence

ATGGAGTCAAGAGCCAAACTTCGAAGGCTGCACCACACAGGTAACATTCTTGACTATGTGAAAGAATTTACCACTCTCATGCTTGAAATCAGTGATCTGCCCGTAAAGGAAGCCCTATTCCAATTTAGAGACGGACTGAAGGATTGGGCTAAAGCCGCCACTAAGATGAAGAAGTGGGCGGACAGGAAAAGGAGGCTCAAAGAGTACCAAGTAGGGGAAAAAGTAATGGTAAAGCTGCTACCTAACCAGTTCAAATCCCTACGCAAGGTACATAAGGGCTTAATTCGAAGGTATGAAGGGCCCTTCTCTATCATCAAGAGAGTGGGAAAAGCAGCTTACAGATTGGAACTTCTTCCCAGATTGAAGATCCATAATGTCTTCCATGTGAGTATGTTGAAGCTCTTTTATGAAGACAAAGAGGATCCGAGCATAAGTGAATCCTCTCGTGCACCTACCTGCATGATCTCAGAATTCAACAGAAAAATCAAGGAGATCTTAGTAGAGAGGAAGATACGAAGGAGAGAAGTTCCCAGTTATAACGAATATCTCATTGCTTGGGAAGGACTACGAGAGAACGAAGCAAGTTGGGAAAAGGAAGACACCCTGTGGCAATTTCAAGATGAAATCAGAAGATTTTAA

Coding sequence (CDS)

ATGGAGTCAAGAGCCAAACTTCGAAGGCTGCACCACACAGGTAACATTCTTGACTATGTGAAAGAATTTACCACTCTCATGCTTGAAATCAGTGATCTGCCCGTAAAGGAAGCCCTATTCCAATTTAGAGACGGACTGAAGGATTGGGCTAAAGCCGCCACTAAGATGAAGAAGTGGGCGGACAGGAAAAGGAGGCTCAAAGAGTACCAAGTAGGGGAAAAAGTAATGGTAAAGCTGCTACCTAACCAGTTCAAATCCCTACGCAAGGTACATAAGGGCTTAATTCGAAGGTATGAAGGGCCCTTCTCTATCATCAAGAGAGTGGGAAAAGCAGCTTACAGATTGGAACTTCTTCCCAGATTGAAGATCCATAATGTCTTCCATGTGAGTATGTTGAAGCTCTTTTATGAAGACAAAGAGGATCCGAGCATAAGTGAATCCTCTCGTGCACCTACCTGCATGATCTCAGAATTCAACAGAAAAATCAAGGAGATCTTAGTAGAGAGGAAGATACGAAGGAGAGAAGTTCCCAGTTATAACGAATATCTCATTGCTTGGGAAGGACTACGAGAGAACGAAGCAAGTTGGGAAAAGGAAGACACCCTGTGGCAATTTCAAGATGAAATCAGAAGATTTTAA

Protein sequence

MESRAKLRRLHHTGNILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDWAKAATKMKKWADRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGKAAYRLELLPRLKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERKIRRREVPSYNEYLIAWEGLRENEASWEKEDTLWQFQDEIRRF*
Homology
BLAST of CsaV3_4G010140 vs. NCBI nr
Match: KAE8649329.1 (hypothetical protein Csa_015359 [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 9.4e-115
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0

Query: 1   MESRAKLRRLHHTGNILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDWAKAATKMKKWA 60
           MESRAKLRRLHHTGNILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDWAKAATKMKKWA
Sbjct: 1   MESRAKLRRLHHTGNILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDWAKAATKMKKWA 60

Query: 61  DRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGKAAYRLELLPR 120
           DRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGKAAYRLELLPR
Sbjct: 61  DRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGKAAYRLELLPR 120

Query: 121 LKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERKIRRREVPSYN 180
           LKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERKIRRREVPSYN
Sbjct: 121 LKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERKIRRREVPSYN 180

Query: 181 EYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 213
           EYLIAWEGLRENEASWEKEDTLWQFQDEIRRF
Sbjct: 181 EYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 212

BLAST of CsaV3_4G010140 vs. NCBI nr
Match: KAE8653146.1 (hypothetical protein Csa_019871, partial [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 7.7e-101
Identity = 194/219 (88.58%), Postives = 200/219 (91.32%), Query Frame = 0

Query: 1   MESRAKLRRLHHTGNILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDWAK-------AA 60
           MESRAKLR L HTGNILDYVKEFTT+MLEISDLP KEALFQFRDGLKDWAK       AA
Sbjct: 234 MESRAKLRSLRHTGNILDYVKEFTTIMLEISDLPEKEALFQFRDGLKDWAKVELDRRNAA 293

Query: 61  TKMKKWADRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGKAAY 120
           TKMKKWADRKRR +EYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSII++VGKAAY
Sbjct: 294 TKMKKWADRKRRAREYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIEKVGKAAY 353

Query: 121 RLELLPRLKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERKIRR 180
           RLEL PRLKIHNVFHVSMLK FYEDKEDPS  ESSRAPT MISEF+RKIKEIL ERKIRR
Sbjct: 354 RLELPPRLKIHNVFHVSMLKPFYEDKEDPSRGESSRAPTGMISEFDRKIKEILAERKIRR 413

Query: 181 REVPSYNEYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 213
           R VPSYNEYLIAWEGL E+EASWEKEDTLWQFQDEIRRF
Sbjct: 414 RGVPSYNEYLIAWEGLPESEASWEKEDTLWQFQDEIRRF 452

BLAST of CsaV3_4G010140 vs. NCBI nr
Match: KGN50791.2 (hypothetical protein Csa_018527 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 8.8e-97
Identity = 195/260 (75.00%), Postives = 201/260 (77.31%), Query Frame = 0

Query: 1   MESRAKLRRLHHTGNILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDW----------- 60
           MESRAKLRRL HTGNILDYVKEFTT+MLEISDLP KEALFQFRDGLKDW           
Sbjct: 288 MESRAKLRRLRHTGNILDYVKEFTTIMLEISDLPEKEALFQFRDGLKDWVKSPFEIVMNQ 347

Query: 61  -------------------------------------AKAATKMKKWADRKRRLKEYQVG 120
                                                AKAATKMKKWADRKRR +EYQVG
Sbjct: 348 QPNTPSALIIPYEGPNPTAYKFAKEWHEECDISRACLAKAATKMKKWADRKRRAREYQVG 407

Query: 121 EKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGKAAYRLELLPRLKIHNVFHVSML 180
           EKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSII++VGKAAYRLEL PRLKIHNVFHVSML
Sbjct: 408 EKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIEKVGKAAYRLELPPRLKIHNVFHVSML 467

Query: 181 KLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERKIRRREVPSYNEYLIAWEGLREN 213
           K FYEDKEDPS  ESSRAPT MISEF+RKIKEIL ERKIRRR VPSYNEYLIAWEGL E+
Sbjct: 468 KPFYEDKEDPSRGESSRAPTGMISEFDRKIKEILAERKIRRRGVPSYNEYLIAWEGLPES 527

BLAST of CsaV3_4G010140 vs. NCBI nr
Match: KAE8647079.1 (hypothetical protein Csa_023021 [Cucumis sativus])

HSP 1 Score: 324.7 bits (831), Expect = 5.9e-85
Identity = 169/193 (87.56%), Postives = 175/193 (90.67%), Query Frame = 0

Query: 1   MESRAKLRRLHHTGNILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDWAK-------AA 60
           MESRAKLRRL HTGNILDYVKEFTT+MLEISDLP KEALFQFRDGLKDWAK       AA
Sbjct: 711 MESRAKLRRLRHTGNILDYVKEFTTIMLEISDLPEKEALFQFRDGLKDWAKVELDRRNAA 770

Query: 61  TKMKKWADRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGKAAY 120
           TKMKKWADRKRR +EYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSII++VGKAAY
Sbjct: 771 TKMKKWADRKRRAREYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIEKVGKAAY 830

Query: 121 RLELLPRLKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERKIRR 180
           RLEL PRLKIHNVFHVSMLK FYEDKEDPS  ESSRAPT MISEF+RKIKEIL ERKIRR
Sbjct: 831 RLELPPRLKIHNVFHVSMLKPFYEDKEDPSRGESSRAPTGMISEFDRKIKEILAERKIRR 890

Query: 181 REVPSYNEYLIAW 187
           R VPSYNEYLI +
Sbjct: 891 RGVPSYNEYLICF 903

BLAST of CsaV3_4G010140 vs. NCBI nr
Match: KAE8653039.1 (hypothetical protein Csa_019702 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 2.2e-79
Identity = 165/215 (76.74%), Postives = 174/215 (80.93%), Query Frame = 0

Query: 1   MESRAKLRRLHHTG---NILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDWAKAATKMK 60
           MESRAKLRRL HTG       + KE+        +  +  A           AKAATKMK
Sbjct: 250 MESRAKLRRLRHTGPNPTAYKFAKEWH------EECDISRACL---------AKAATKMK 309

Query: 61  KWADRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGKAAYRLEL 120
           KWADRKRR +EYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSII++VGKAAYRLEL
Sbjct: 310 KWADRKRRAREYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIEKVGKAAYRLEL 369

Query: 121 LPRLKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERKIRRREVP 180
            PRLKIHNVFHVSMLK FYEDKEDPS  ESSRAPT MISEF+RKIKEIL ERKIRRR VP
Sbjct: 370 PPRLKIHNVFHVSMLKPFYEDKEDPSRGESSRAPTGMISEFDRKIKEILAERKIRRRGVP 429

Query: 181 SYNEYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 213
           SYNEYLIAWEGL E+EASWEKEDTLWQFQDEIRRF
Sbjct: 430 SYNEYLIAWEGLPESEASWEKEDTLWQFQDEIRRF 449

BLAST of CsaV3_4G010140 vs. ExPASy TrEMBL
Match: A0A5A7UCY6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2143G00490 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 8.7e-66
Identity = 126/162 (77.78%), Postives = 149/162 (91.98%), Query Frame = 0

Query: 51  KAATKMKKWADRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGK 110
           KAA +MKKWAD+KRR KEY++G+KV+VKLLPNQFKSLRKVHKGL+RRYEGPFSII+RVGK
Sbjct: 231 KAARRMKKWADKKRRPKEYEIGDKVLVKLLPNQFKSLRKVHKGLVRRYEGPFSIIERVGK 290

Query: 111 AAYRLELLPRLKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERK 170
           AAY++EL PRLKIHNVFHVSMLK F+ED+EDP+ S++SRAPT +I+EF+RKIKEIL ERK
Sbjct: 291 AAYKVELPPRLKIHNVFHVSMLKPFHEDREDPNRSKTSRAPTGVITEFDRKIKEILAERK 350

Query: 171 IRRREVPSYNEYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 213
           IRRR VPS++EYLI WEGL E+EASWE+ED LWQFQ EI +F
Sbjct: 351 IRRRGVPSHSEYLILWEGLPESEASWEREDMLWQFQAEIEKF 392

BLAST of CsaV3_4G010140 vs. ExPASy TrEMBL
Match: A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 125/162 (77.16%), Postives = 149/162 (91.98%), Query Frame = 0

Query: 51   KAATKMKKWADRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGK 110
            KAA +MKKWAD+KRR KEY++G+KV+VKLLPNQFKSLRKVHKGL+RRYEGPFSII+RVGK
Sbjct: 1382 KAARRMKKWADKKRRPKEYEIGDKVLVKLLPNQFKSLRKVHKGLVRRYEGPFSIIERVGK 1441

Query: 111  AAYRLELLPRLKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERK 170
            AAY++EL PRLKIHNVFH+SMLK F+ED+EDP+ S++SRAPT +I+EF+RKIKEIL ERK
Sbjct: 1442 AAYKVELPPRLKIHNVFHISMLKPFHEDREDPNRSKTSRAPTGVITEFDRKIKEILAERK 1501

Query: 171  IRRREVPSYNEYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 213
            IRRR VPS++EYLI WEGL E+EASWE+ED LWQFQ EI +F
Sbjct: 1502 IRRRGVPSHSEYLILWEGLPESEASWEREDMLWQFQAEIEKF 1543

BLAST of CsaV3_4G010140 vs. ExPASy TrEMBL
Match: A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.1e-15
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 0

Query: 1   MESRAKLRRLHHTGNILDYVKEFTTLMLEISDLPVKEALFQFRDGLKDWAK 52
           +ESR KLRRL HTG+IL+YVKEFTTLMLEI DLP KEALFQF+DGLKDWAK
Sbjct: 249 IESRGKLRRLRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAK 299


HSP 2 Score: 258.5 bits (659), Expect = 2.5e-65
Identity = 126/162 (77.78%), Postives = 148/162 (91.36%), Query Frame = 0

Query: 51   KAATKMKKWADRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGK 110
            KAA +MKKWAD+KRR KEY++G+KV+VKLLPNQFKSLRKVHKGL+RRYEGPFSII+RVGK
Sbjct: 1373 KAARRMKKWADKKRRPKEYEIGDKVLVKLLPNQFKSLRKVHKGLVRRYEGPFSIIERVGK 1432

Query: 111  AAYRLELLPRLKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERK 170
            AAY++EL PRLKIHNVFHVSMLK F+ED+EDP+ S++SRAPT +I EF+RKIKEIL ERK
Sbjct: 1433 AAYKVELPPRLKIHNVFHVSMLKPFHEDQEDPNRSKTSRAPTGVIIEFDRKIKEILAERK 1492

Query: 171  IRRREVPSYNEYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 213
            IRRR VPS++EYLI WEGL E+EASWE+ED LWQFQ EI +F
Sbjct: 1493 IRRRGVPSHSEYLILWEGLPESEASWEREDMLWQFQAEIEKF 1534

BLAST of CsaV3_4G010140 vs. ExPASy TrEMBL
Match: A0A5A7SS05 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1276G00540 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.3e-65
Identity = 124/162 (76.54%), Postives = 149/162 (91.98%), Query Frame = 0

Query: 51  KAATKMKKWADRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGK 110
           KAA +MKKWAD+KRR KEY++G+KV+VKLLPNQFKSLRKVHKGL+RRYEGPFSII+RVGK
Sbjct: 753 KAARRMKKWADKKRRPKEYEIGDKVLVKLLPNQFKSLRKVHKGLVRRYEGPFSIIERVGK 812

Query: 111 AAYRLELLPRLKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERK 170
           AAY++EL P+LKIHNVFHVSMLK F+ED+EDP+ S++SRAPT +I+EF+RKIKEIL ERK
Sbjct: 813 AAYKVELPPKLKIHNVFHVSMLKPFHEDREDPNRSKTSRAPTGVITEFDRKIKEILAERK 872

Query: 171 IRRREVPSYNEYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 213
           IRRR VPS++EYLI WEGL E+EASWE++D LWQFQ EI +F
Sbjct: 873 IRRRGVPSHSEYLILWEGLPESEASWERDDMLWQFQAEIEKF 914

BLAST of CsaV3_4G010140 vs. ExPASy TrEMBL
Match: A0A5A7SMQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002780 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.3e-65
Identity = 124/162 (76.54%), Postives = 148/162 (91.36%), Query Frame = 0

Query: 51  KAATKMKKWADRKRRLKEYQVGEKVMVKLLPNQFKSLRKVHKGLIRRYEGPFSIIKRVGK 110
           KAA +MKKWAD+KRR KEY++G+KV+VKLLPNQFKSLRKVHKGL+RRYEGPFSII+RVGK
Sbjct: 172 KAARRMKKWADKKRRQKEYEIGDKVLVKLLPNQFKSLRKVHKGLVRRYEGPFSIIERVGK 231

Query: 111 AAYRLELLPRLKIHNVFHVSMLKLFYEDKEDPSISESSRAPTCMISEFNRKIKEILVERK 170
           AAY++EL  +LKIHNVFHVSMLK F+EDKEDP+ SE+SRAPT ++++F+RKIKEIL ERK
Sbjct: 232 AAYKVELPQKLKIHNVFHVSMLKPFHEDKEDPNRSETSRAPTGVVTKFDRKIKEILAERK 291

Query: 171 IRRREVPSYNEYLIAWEGLRENEASWEKEDTLWQFQDEIRRF 213
           IRRR VPS++EYLI WEGL E+EASWE+ED LWQFQ EI +F
Sbjct: 292 IRRRGVPSHSEYLILWEGLPESEASWEREDVLWQFQTEIEKF 333

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8649329.19.4e-115100.00hypothetical protein Csa_015359 [Cucumis sativus][more]
KAE8653146.17.7e-10188.58hypothetical protein Csa_019871, partial [Cucumis sativus][more]
KGN50791.28.8e-9775.00hypothetical protein Csa_018527 [Cucumis sativus][more]
KAE8647079.15.9e-8587.56hypothetical protein Csa_023021 [Cucumis sativus][more]
KAE8653039.12.2e-7976.74hypothetical protein Csa_019702 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UCY68.7e-6677.78Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21... [more]
A0A5A7VEX81.1e-6577.16Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=... [more]
A0A5A7VEX84.1e-1584.31Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=... [more]
A0A5A7SS054.3e-6576.54Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1276G00540 P... [more]
A0A5A7SMQ44.3e-6576.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.40coord: 153..212
e-value: 1.0E-7
score: 33.5
IPR023780Chromo domainPFAMPF00385Chromocoord: 167..212
e-value: 2.0E-6
score: 27.6
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 160..212
score: 11.743001
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 122..212

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G010140.1CsaV3_4G010140.1mRNA