CsaV3_4G010060 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G010060
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 7803942 .. 7804398 (-)
RNA-Seq ExpressionCsaV3_4G010060
SyntenyCsaV3_4G010060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCACTATTTTTAACCATTTTATGGTTGGCGTGCAGCTAGGACTCCCTCCTTTCGTTACAGAATCTGAATGTCATGTTTCTTCCAATATTGTGTTACAAGAGACATGTGCAGTCAATGTATGGCTTGAGTTTTTGCTGCTGGTGTTGTTTTGCCTGGTGCTTATGTTGTATGTAAGGTAGTGATTCTTTTTCATAACGATTCTGATTGTAATTCTACTCATTGTGTGATTAATGGTCGTATTTTAGAGCTGGTTGGCGGGAGAAAGTAGAAATCTCTATCTTCTGATTCCATTTTTTAACATGTTTAACACTGACTTCAAATACGCTCTTCCAAAAAACATCTACTTCAACAAAGATTTCTGATTACCTGTGAAGTTCTGTTGTGTTTTTGGATGTGGTTTCATGATGCAGGTTAGCAGCTTTACATTTTGGTCTCTACCATTATGAAGTGTGA

mRNA sequence

ATGGTCACTATTTTTAACCATTTTATGGTTGGCGTGCAGCTAGGACTCCCTCCTTTCGTTACAGAATCTGAATGTCATGTTTCTTCCAATATTGTGTTACAAGAGACATGTGCAGTCAATGTATGGCTTGAGTTTTTGCTGCTGGTGTTGTTTTGCCTGGTGCTTATGTTGTATGTAAGGTTAGCAGCTTTACATTTTGGTCTCTACCATTATGAAGTGTGA

Coding sequence (CDS)

ATGGTCACTATTTTTAACCATTTTATGGTTGGCGTGCAGCTAGGACTCCCTCCTTTCGTTACAGAATCTGAATGTCATGTTTCTTCCAATATTGTGTTACAAGAGACATGTGCAGTCAATGTATGGCTTGAGTTTTTGCTGCTGGTGTTGTTTTGCCTGGTGCTTATGTTGTATGTAAGGTTAGCAGCTTTACATTTTGGTCTCTACCATTATGAAGTGTGA

Protein sequence

MVTIFNHFMVGVQLGLPPFVTESECHVSSNIVLQETCAVNVWLEFLLLVLFCLVLMLYVRLAALHFGLYHYEV*
Homology
[Close]
BLAST of CsaV3_4G010060 vs. NCBI nr
Match: KGN53774.1 (hypothetical protein Csa_015148 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 3.8e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MVTIFNHFMVGVQLGLPPFVTESECHVSSNIVLQETCAVNVWLEFLLLVLFCLVLMLYVR 60
          MVTIFNHFMVGVQLGLPPFVTESECHVSSNIVLQETCAVNVWLEFLLLVLFCLVLMLYVR
Sbjct: 1  MVTIFNHFMVGVQLGLPPFVTESECHVSSNIVLQETCAVNVWLEFLLLVLFCLVLMLYVR 60

Query: 61 LAALHFGLYHYEV 74
          LAALHFGLYHYEV
Sbjct: 61 LAALHFGLYHYEV 73

[Close]
BLAST of CsaV3_4G010060 vs. ExPASy TrEMBL
Match: A0A0A0KY42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G126440 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MVTIFNHFMVGVQLGLPPFVTESECHVSSNIVLQETCAVNVWLEFLLLVLFCLVLMLYVR 60
          MVTIFNHFMVGVQLGLPPFVTESECHVSSNIVLQETCAVNVWLEFLLLVLFCLVLMLYVR
Sbjct: 1  MVTIFNHFMVGVQLGLPPFVTESECHVSSNIVLQETCAVNVWLEFLLLVLFCLVLMLYVR 60

Query: 61 LAALHFGLYHYEV 74
          LAALHFGLYHYEV
Sbjct: 61 LAALHFGLYHYEV 73

The following BLAST results are available for this feature:
BLAST of CsaV3_4G010060 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53774.13.8e-31100.00hypothetical protein Csa_015148 [Cucumis sativus][more]
BLAST of CsaV3_4G010060 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G010060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY421.8e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G126440 PE=4 SV=1[more]
BLAST of CsaV3_4G010060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G010060.1CsaV3_4G010060.1mRNA