CsaV3_4G010050 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAATTAAACTCCCAAATAAATATTTGATAAAAGAAAACAGCCATTTAATTGGCGAAAAATAACTGAAATAAAAAAAAAAAAAAAACAATATTTAAAAAGAGTTATTGAGGATGAGAAGAGAAAGAAGAAAGTTGTGTGGCTCTTGTAATTGTCTCGTGAAGGAAACTGAGTCCCTATCCCTATCCCTATCCCCAATCCCAATTATGTGATTCTGTCTTTAACATGAAACTCATAAATTAATCAATCTCTCTTTTGCCGTTATTTTTTAAAAAAATTATATTGTTATAGTTAAATTTATTTTTGATTTTGCACAGTTTTCATAACAAACTGCGTTATGGGAAAATTTAATTTAGATAAGGATACACAAACACATATATGATGCTCTTATCCTGGAAAGTATAAATAAGTGTAAAAGGAGTATAACCCTCAAACTTAATTCTTTCTACTTCTTACTATCATTACATTATGAAGAAGGGTTGGATTTTACTTCTGTTTTTTATGTTTCTTAACCTTACTTTTTATAATGGTTTCTCTAAGCCTCTTCTTCTTCACAACAACAAACTTCAACCTGCTGTTGTTGTTGGTACGGTCTTCTGTGACACTTGCTTCCAACAACATCTTTCCAATTCTCACCATTTCATCTCAGGTTCTTCTTTTTCTTCTTCTTATATCATATAATATTGAATCAAGAAGTATTGTATTCAATTTCGGTTACGAGTGTCTTATGTTTTGTGTTTTAACCTTTGCAAAGTTATTTGTATTTCAAGATAGAAGATGTGAAGAGTGAGTGTCAGCGAGAAATAAATGATTTAAAAGAATCAACCATCATTTCATCCCATGTTGCATTTTTTTTTTTCTCTGTTGAGAATGATTTGTGAGGTTATACTATTTGTTCGCAGGTGCTAGAGTTGAAGTAGAATGCAGAGATGAAAAAACCCCCGAAGCCAGTTTCAAACAGCAAGTTAAAACCAACAAAAATGGAAAATTCAAAGTTGTTTTGCCGTTCTCAATTGCTAAACATGTTAAGAAAATTGAAAGCTGTTCTGTTAAATTGATCAAATCCAGTGAACCCTTCTGCTCTGTGGCCTCCTCTGCATCTTCCTCTTCTCTCCAATTAAAAAACTCAAAGAACAAAAATGGAGTCCGCATTTTCTCTGCCGGATTTTTCACTTTCAAGCCTTTGCAACAACCCACTTTGTGCAATCAAAAGTCTAACCCACAGCTTCCCTTTCCGCCGCTTGTTCCGCCCGTAATTCAGCCACCCTCGTTTTTTCCGCCCAACCCCCTGCAGCCGACGCCACTCGTTCCCAACCCCTTTCAGCCGCCGGCGCCATTGATCCCGAACCCATTTCAGCCGCCGGCGCCAGTGATCCCAAACCCATTTCAGCCACCTACTCCGGTGATTCCTAACCCATTTCAGCCGGCGCCAGCAACGGGTCTTCCTCTGCCGCCTCTGCCGTTTATCACTCCGTCGCCGCCTCCACCAACGTTGCTACCGCCATCGTTTTTGCCACCGTTTCTGCCGCCCATCCCTGGGATTCCGCCTGGTCCGCCTAGAGAGGAAACTTCTTCACCCATCAAACAGATCAGCCCATGAAGGATGATTTTTCATTATAGTTAATCATGGTTAAAGATTGTTTTTTCCTTTTTGATGATTATGATCTGCATATATGATTATGTGTTATGGATTCGTATAATCTGAAATAAGTTTAGCGTAATATTCTGGTTTTTTATTTCAATAATATTGTTTGAGTTTGAATTAGAAATAAAACTGGAGTGCTTTATCACATCCGTATTACTCCTTCACCTTTCTCGTTTTTGTTTATTGTCTTCTAAGAACTAAACGTGTTTGATCATTCTTTTCTTCTTTCTTTTTTTTATATTTTGAGTATTATGTATCTAAAAGTTGGACAAATTTTGAAAAATCATGCAATGTAATTTTTCCTAATTCTCTTTCTATTTGTTTTTATCTCACTATTTATATGCTATCAAAATTTCCACTGGCCTCAATGGTACCCATAAATGTTTAAAACTATTTTTGGTCTATAATGATTCAATTTCAAACTTTG ATGAAGAAGGGTTGGATTTTACTTCTGTTTTTTATGTTTCTTAACCTTACTTTTTATAATGGTTTCTCTAAGCCTCTTCTTCTTCACAACAACAAACTTCAACCTGCTGTTGTTGTTGGTACGGTCTTCTGTGACACTTGCTTCCAACAACATCTTTCCAATTCTCACCATTTCATCTCAGGTGCTAGAGTTGAAGTAGAATGCAGAGATGAAAAAACCCCCGAAGCCAGTTTCAAACAGCAAGTTAAAACCAACAAAAATGGAAAATTCAAAGTTGTTTTGCCGTTCTCAATTGCTAAACATGTTAAGAAAATTGAAAGCTGTTCTGTTAAATTGATCAAATCCAGTGAACCCTTCTGCTCTGTGGCCTCCTCTGCATCTTCCTCTTCTCTCCAATTAAAAAACTCAAAGAACAAAAATGGAGTCCGCATTTTCTCTGCCGGATTTTTCACTTTCAAGCCTTTGCAACAACCCACTTTGTGCAATCAAAAGTCTAACCCACAGCTTCCCTTTCCGCCGCTTGTTCCGCCCGTAATTCAGCCACCCTCGTTTTTTCCGCCCAACCCCCTGCAGCCGACGCCACTCGTTCCCAACCCCTTTCAGCCGCCGGCGCCATTGATCCCGAACCCATTTCAGCCGCCGGCGCCAGTGATCCCAAACCCATTTCAGCCACCTACTCCGGTGATTCCTAACCCATTTCAGCCGGCGCCAGCAACGGGTCTTCCTCTGCCGCCTCTGCCGTTTATCACTCCGTCGCCGCCTCCACCAACGTTGCTACCGCCATCGTTTTTGCCACCGTTTCTGCCGCCCATCCCTGGGATTCCGCCTGGTCCGCCTAGAGAGGAAACTTCTTCACCCATCAAACAGATCAGCCCATGA ATGAAGAAGGGTTGGATTTTACTTCTGTTTTTTATGTTTCTTAACCTTACTTTTTATAATGGTTTCTCTAAGCCTCTTCTTCTTCACAACAACAAACTTCAACCTGCTGTTGTTGTTGGTACGGTCTTCTGTGACACTTGCTTCCAACAACATCTTTCCAATTCTCACCATTTCATCTCAGGTGCTAGAGTTGAAGTAGAATGCAGAGATGAAAAAACCCCCGAAGCCAGTTTCAAACAGCAAGTTAAAACCAACAAAAATGGAAAATTCAAAGTTGTTTTGCCGTTCTCAATTGCTAAACATGTTAAGAAAATTGAAAGCTGTTCTGTTAAATTGATCAAATCCAGTGAACCCTTCTGCTCTGTGGCCTCCTCTGCATCTTCCTCTTCTCTCCAATTAAAAAACTCAAAGAACAAAAATGGAGTCCGCATTTTCTCTGCCGGATTTTTCACTTTCAAGCCTTTGCAACAACCCACTTTGTGCAATCAAAAGTCTAACCCACAGCTTCCCTTTCCGCCGCTTGTTCCGCCCGTAATTCAGCCACCCTCGTTTTTTCCGCCCAACCCCCTGCAGCCGACGCCACTCGTTCCCAACCCCTTTCAGCCGCCGGCGCCATTGATCCCGAACCCATTTCAGCCGCCGGCGCCAGTGATCCCAAACCCATTTCAGCCACCTACTCCGGTGATTCCTAACCCATTTCAGCCGGCGCCAGCAACGGGTCTTCCTCTGCCGCCTCTGCCGTTTATCACTCCGTCGCCGCCTCCACCAACGTTGCTACCGCCATCGTTTTTGCCACCGTTTCTGCCGCCCATCCCTGGGATTCCGCCTGGTCCGCCTAGAGAGGAAACTTCTTCACCCATCAAACAGATCAGCCCATGA MKKGWILLLFFMFLNLTFYNGFSKPLLLHNNKLQPAVVVGTVFCDTCFQQHLSNSHHFISGARVEVECRDEKTPEASFKQQVKTNKNGKFKVVLPFSIAKHVKKIESCSVKLIKSSEPFCSVASSASSSSLQLKNSKNKNGVRIFSAGFFTFKPLQQPTLCNQKSNPQLPFPPLVPPVIQPPSFFPPNPLQPTPLVPNPFQPPAPLIPNPFQPPAPVIPNPFQPPTPVIPNPFQPAPATGLPLPPLPFITPSPPPPTLLPPSFLPPFLPPIPGIPPGPPREETSSPIKQISP* Homology
BLAST of CsaV3_4G010050 vs. NCBI nr
Match: XP_004137142.1 (amyloid beta A4 precursor protein-binding family B member 1-interacting protein [Cucumis sativus] >KGN53773.1 hypothetical protein Csa_014827 [Cucumis sativus]) HSP 1 Score: 561.2 bits (1445), Expect = 5.2e-156 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. NCBI nr
Match: XP_008455556.1 (PREDICTED: ras-associated and pleckstrin homology domains-containing protein 1 [Cucumis melo]) HSP 1 Score: 510.4 bits (1313), Expect = 1.0e-140 Identity = 264/289 (91.35%), Postives = 273/289 (94.46%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. NCBI nr
Match: TYK04682.1 (ras-associated and pleckstrin-like proteiny domains-containing protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 506.1 bits (1302), Expect = 2.0e-139 Identity = 262/286 (91.61%), Postives = 271/286 (94.76%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. NCBI nr
Match: XP_038888687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Benincasa hispida]) HSP 1 Score: 442.6 bits (1137), Expect = 2.7e-120 Identity = 242/298 (81.21%), Postives = 259/298 (86.91%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. NCBI nr
Match: KAA0032429.1 (ras-associated and pleckstrin-like proteiny domains-containing protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 406.0 bits (1042), Expect = 2.8e-109 Identity = 214/232 (92.24%), Postives = 221/232 (95.26%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.4e-07 Identity = 65/156 (41.67%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. ExPASy Swiss-Prot
Match: Q9LK03 (Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana OX=3702 GN=PERK2 PE=2 SV=3) HSP 1 Score: 54.3 bits (129), Expect = 2.7e-06 Identity = 55/126 (43.65%), Postives = 66/126 (52.38%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. ExPASy TrEMBL
Match: A0A0A0KW32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G126430 PE=4 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 2.5e-156 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. ExPASy TrEMBL
Match: A0A1S3C0S0 (ras-associated and pleckstrin homology domains-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103495706 PE=4 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 5.1e-141 Identity = 264/289 (91.35%), Postives = 273/289 (94.46%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. ExPASy TrEMBL
Match: A0A5D3C0I5 (Ras-associated and pleckstrin-like proteiny domains-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5117G00070 PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 9.6e-140 Identity = 262/286 (91.61%), Postives = 271/286 (94.76%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. ExPASy TrEMBL
Match: A0A5A7ST55 (Ras-associated and pleckstrin-like proteiny domains-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1876G00020 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109 Identity = 214/232 (92.24%), Postives = 221/232 (95.26%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. ExPASy TrEMBL
Match: A0A6J1GY01 (gibberellin-regulated protein 14 OS=Cucurbita moschata OX=3662 GN=LOC111457870 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 1.0e-85 Identity = 187/293 (63.82%), Postives = 219/293 (74.74%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 172.9 bits (437), Expect = 3.7e-43 Identity = 150/366 (40.98%), Postives = 191/366 (52.19%), Query Frame = 0
BLAST of CsaV3_4G010050 vs. TAIR 10
Match: AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 45.4 bits (106), Expect = 8.9e-05 Identity = 82/268 (30.60%), Postives = 116/268 (43.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|