CsaV3_4G009410 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G009410
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Ribosomal protein
Location	chr4: 7040366 .. 7043347 (+)
RNA-Seq Expression	CsaV3_4G009410
Synteny	CsaV3_4G009410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGGTAGCGTTGATGAAGGATATTAACTCTTGGTCCTTGGCTTGCCAGTTTCAAGCAGAGGATTACTAATTTCAAAAGTTGAAGATGAAGTATTTTGAGTAGTTGTTGAGGAACTTGGATTTATGAAAGCTAGAATCAACTTGTGTACTTTCAGCATAGGTTCAAATTGGAACTTCCAGTGGGTGTAGTTAGTTGAATCAAGACAAATGGATATCAAATTGCATATACTTGTTAAAAGGAAGAGGTGTGATGATAGTTGTTTGGAGGTTGAAGAAGAAGAGTTTGCTTTGGTTCCCATGGTAGGAGAAAGGATTGAAAAAAGGAGAAGAAGACGTGGGTTTGAAAAGCTCTAATACCATGAAAACTAATGGCCATTGAAAATTAACTAAGGTGTTTTCTCGTTGATTTATTTGTTGGTAATTAAGAGTATTTACAATACTATTTTACAATACAGTTTGAAAAACAGAAGAAGTGAAAAATATAACAAATGATAACTAAATTTAAAATGGTTTTGTACAACTAATTGTACATGATAATAAGCACTACCACTTGGGCATGAATATAAAAGGGCTCACAGGTTGGGCGGTGTGATCCATAGTAAGCAAGCAGAGAGGCTATTATTATTGTAAATGAAAGTGTAATTATATATGGATAGGGTGTTAAAGCAAGGAGCAAATTTATTAAGTGATGAGGGACACGTGCTCATCACATTATCAAGTTGTACTATTACTAAAATCTGCATTTAGTATAGTGGTCGTGTCTTTCTTCAAAATTCAAAAGAATTATGTTTCAAAATTGGAATGTTGGTGTAGAGGTGAATTTCCCTTTTTATAATCTAACATAAATTAATTTAATTAAAATTACACAAAGTTGGATCGATGGTTAGATTAATTTTTATATATCAATTACACATTTGAAAGAAGTGGGAGAGTCCTCGTAATCGTATGTGATGTCTCATCCACCAAGACCGGAAAATACTTTAGGGTTTTCTTTTCGCCACTTCTTATTCCCATAACCACCGCCAGCGCCCGTCCGACCACGATGCCGAAACTCTCCCTCTCTCACCTCTCCTCTCTCTTCCGCTCATCCTCTCTCTCTCCTGCACCTTCTTTTTCTCCTTCTCGCCTCTCCATTTCACCGTTCATTGGCTCAGATGCGCCTTCACGCATGTCCTCCCTCCACCGATCAGATCTCACTGGATCCCTTCAACCACACAACCAGTTCTCAGGTGAATACTGCTCTTTGTCTTCTATCTAATTCGGGAAATGACAGTTAGAATTTATTGGTTGATTTCTTTAGTGAGTGATGAGTGTTCTGCGTATTGCAGGCTGTCTTCGTGATTCTGCTAATGTGGGCCGAGAGATTGTAGGACGTGGTTGGAAATCCATGGGAGTTCAGGGTCCTAGTTCGGGTTTGGCGCGTCCAAGTGAAGGTGTCTCCATTCCTTATTCTATTAGCTCTAGATGTTATGGAGAGTATGACAACCGGCCTAATCCTCCAGATACAGGAAGGAATCTTAAGCCTATGAACTTCGTGAGGGGAATTTTAGAGGAAGAGGAAAGGGGTTTTTTTGGTACTCCTCAGTTCCTTAGGCCATCCAATATGGAACACAATGCTGATATCGTTCATATAAAGCTGATGCGTAACAATTCATTTGTCACTGTTACGGATAACAAGGGAAATACAAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGGAGGGGCTAAACTGTCTCGTTATTCTGCTGATTCAATTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTTAAAGGCTTTACTTTTTTTAAGAAGAAAAAGCAAGCCATCTTGAGTTGGAGAGATGGATTTACTGATTCTAGAACTGACCAAAATCCGATTGTTTACGTTGAAGATACGACGAGACGTGCACACAATGGTTGCCGACTCCCAAAGAAACGCCGTGTCTAGATTTACCGTGTTGTCTTCATTTTCTTATATCTTTGCTGGCTCAGTTTCGAATTTTTGTAGCTAGCTTGCCTTCAAGTTCTTACTTGCTTGTTACAATAATGATGACAATAGAATGGTTTTCTATATACATCAGTGTAAAACATTTGCTTTTTAGTTATTACCATATGGACTTCATTTCAATAGAACGATATCAAGAGTTTAAGTGGCCCCCAGCTTCCAATCTTTTTACTTTTAAGTTCATTTTCTTCTGTTATTATTTTGTGGATTACTCATTTCTTGGACATTGCATCTGTGCTTCTCAGTTCTCACTGTGACCCCCCGCGCTTGGAATTCTTGTTTTACTGTTTGCGCAAAAAATTTTGGTTTCTAGTTATGGCTCAGATGATGACAGTCGAAGGTGGCTTTGTCTGGTTTAACTACAGAACAGAGAGAGTTATCACAATAAATTGACCAATGTTTTTGTTTGGGAGGTATTTATGTAGATTTGCAGGCTTTTTGATCGTTGATGCTGGATTTGTACTCTGAATCTGGACCCTCAGCAGAGATGGCCACAACATGCGCACAGCATGGAGATTCATAATTGTTTACTAACAATGACATGGAATTATACAAAACGTTCTAGAATCAGAAAGCCTTGACGCATAATTGGTAAAGGGTGTTCCTCCATACAGTTCTGAATAGAAGAATGGAGCAATAGAGCTACTGAGGGTGATATATTGATGTGCACGTGATGGCTGATTTGAAGTTGCTGCGCTCATGTTTTCTTGCTAAATCTTTTCTGAGGATGTAATTTGTCGCTGTCTCAGCTTCGGCAGTACATCCTTTTTAGTGCTGGAGGTACTTGCATTGCATTGCATCAACTGATATGAAAATGAATATTGGTGATAGGGATGAACCCAATGCACACGAATTTTTCACTTTCTAATGTTTGATTATCGTGTCCATAGTCACTTTCTAATGTTTGATTATCGTATACGTAGTCACTTTCTAATGTTTGATTATCGTAT

mRNA sequence

ATGCCGAAACTCTCCCTCTCTCACCTCTCCTCTCTCTTCCGCTCATCCTCTCTCTCTCCTGCACCTTCTTTTTCTCCTTCTCGCCTCTCCATTTCACCGTTCATTGGCTCAGATGCGCCTTCACGCATGTCCTCCCTCCACCGATCAGATCTCACTGGATCCCTTCAACCACACAACCAGTTCTCAGGCTGTCTTCGTGATTCTGCTAATGTGGGCCGAGAGATTGTAGGACGTGGTTGGAAATCCATGGGAGTTCAGGGTCCTAGTTCGGGTTTGGCGCGTCCAAGTGAAGGAAGGAATCTTAAGCCTATGAACTTCGTGAGGGGAATTTTAGAGGAAGAGGAAAGGGGTTTTTTTGGTACTCCTCAGTTCCTTAGGCCATCCAATATGGAACACAATGCTGATATCGTTCATATAAAGCTGATGCGTAACAATTCATTTGTCACTGTTACGGATAACAAGGGAAATACAAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGGAGGGGCTAAACTGTCTCGTTATTCTGCTGATTCAATTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTTAAAGGCTTTACTTTTTTTAAGAAGAAAAAGCAAGCCATCTTGAGTTGGAGAGATGGATTTACTGATTCTAGAACTGACCAAAATCCGATTGTTTACGTTGAAGATACGACGAGACGTGCACACAATGGTTGCCGACTCCCAAAGAAACGCCGTGTCTAG

Coding sequence (CDS)

ATGCCGAAACTCTCCCTCTCTCACCTCTCCTCTCTCTTCCGCTCATCCTCTCTCTCTCCTGCACCTTCTTTTTCTCCTTCTCGCCTCTCCATTTCACCGTTCATTGGCTCAGATGCGCCTTCACGCATGTCCTCCCTCCACCGATCAGATCTCACTGGATCCCTTCAACCACACAACCAGTTCTCAGGCTGTCTTCGTGATTCTGCTAATGTGGGCCGAGAGATTGTAGGACGTGGTTGGAAATCCATGGGAGTTCAGGGTCCTAGTTCGGGTTTGGCGCGTCCAAGTGAAGGAAGGAATCTTAAGCCTATGAACTTCGTGAGGGGAATTTTAGAGGAAGAGGAAAGGGGTTTTTTTGGTACTCCTCAGTTCCTTAGGCCATCCAATATGGAACACAATGCTGATATCGTTCATATAAAGCTGATGCGTAACAATTCATTTGTCACTGTTACGGATAACAAGGGAAATACAAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGGAGGGGCTAAACTGTCTCGTTATTCTGCTGATTCAATTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTTAAAGGCTTTACTTTTTTTAAGAAGAAAAAGCAAGCCATCTTGAGTTGGAGAGATGGATTTACTGATTCTAGAACTGACCAAAATCCGATTGTTTACGTTGAAGATACGACGAGACGTGCACACAATGGTTGCCGACTCCCAAAGAAACGCCGTGTCTAG

Protein sequence

MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQFSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSEGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGRLEGGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV*

Homology

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BLAST of CsaV3_4G009410 vs. NCBI nr
Match: KAE8649303.1 (hypothetical protein Csa_014520 [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 3.0e-136
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60
           MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ
Sbjct: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60

Query: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSEGRNLKPMNFVRGILEEEERGFFG 120
           FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSEGRNLKPMNFVRGILEEEERGFFG
Sbjct: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSEGRNLKPMNFVRGILEEEERGFFG 120

Query: 121 TPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGRLEGGAKLSRYSADSI 180
           TPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGRLEGGAKLSRYSADSI
Sbjct: 121 TPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGRLEGGAKLSRYSADSI 180

Query: 181 AEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRA 240
           AEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRA
Sbjct: 181 AEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRA 240

Query: 241 HNGCRLPKKRRV 253
           HNGCRLPKKRRV
Sbjct: 241 HNGCRLPKKRRV 252

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BLAST of CsaV3_4G009410 vs. NCBI nr
Match: XP_004137167.1 (probable ribosomal protein S11, mitochondrial [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 4.5e-132
Identity = 252/277 (90.97%), Postives = 252/277 (90.97%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60
           MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ
Sbjct: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60

Query: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSE----------------------- 120
           FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSE                       
Sbjct: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSEGVSIPYSISSRCYGEYDNRPNPP 120

Query: 121 --GRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180
             GRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG
Sbjct: 121 DTGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180

Query: 181 NTKLKASAGRLEGGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILS 240
           NTKLKASAGRLEGGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILS
Sbjct: 181 NTKLKASAGRLEGGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILS 240

Query: 241 WRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           WRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV
Sbjct: 241 WRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 277

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BLAST of CsaV3_4G009410 vs. NCBI nr
Match: XP_008455641.1 (PREDICTED: probable ribosomal protein S11, mitochondrial [Cucumis melo] >KAA0045282.1 putative ribosomal protein S11 [Cucumis melo var. makuwa])

HSP 1 Score: 399.4 bits (1025), Expect = 2.2e-107
Identity = 218/281 (77.58%), Postives = 229/281 (81.49%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60
           MPKLSLSHLS LFRSSSLS +PSFSPSRLSISPFIGSDAPSR SS   S LTGSLQPHN 
Sbjct: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60

Query: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLAR-------------------------P 120
           FSG      +VGREIVGRGWK+MGVQGPS GLAR                         P
Sbjct: 61  FSG------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPP 120

Query: 121 SEGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180
             GRNLK +NFVRGILEE+E+ F   PQ+LRP+NMEHNADIVHIKLMRNN+FVTVTDNKG
Sbjct: 121 DTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKG 180

Query: 181 NTKLKASAGRLE----GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240
           NTKLKASAGRLE    GGAKLSRYS DSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ
Sbjct: 181 NTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240

Query: 241 AILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           AILSWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPKKRRV
Sbjct: 241 AILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275

[Close]

BLAST of CsaV3_4G009410 vs. NCBI nr
Match: XP_038903066.1 (probable ribosomal protein S11, mitochondrial [Benincasa hispida])

HSP 1 Score: 363.2 bits (931), Expect = 1.8e-96
Identity = 198/283 (69.96%), Postives = 219/283 (77.39%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60
           MPKLSLSHL SLFRSSSL   PSFSPSRLSISPFIGSD+ S MSS+HRSDLTGS++  NQ
Sbjct: 1   MPKLSLSHLYSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSIHRSDLTGSIRLDNQ 60

Query: 61  FSGCL----RDSANVGREIVGRGWKSMGVQGPSSGLARPSE------------------- 120
            SGCL     DSANVGREIVGRGWKS G QG    L R SE                   
Sbjct: 61  LSGCLDLSQGDSANVGREIVGRGWKSTGAQGSCWSLGRSSECVSVSHSTSYRCYGQYDNR 120

Query: 121 -----GRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTD 180
                GRNL  M+FVR  LEE  R F G+ +F R  NMEHNADIVH+KL+RNN+F+TVTD
Sbjct: 121 PNADTGRNLNSMSFVRDTLEEGGRYFTGSSRFFRQPNMEHNADIVHVKLLRNNTFITVTD 180

Query: 181 NKGNTKLKASAGRLE---GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKK 240
           NKGNTKLKASAGRLE   GG KLSRY+A+++AEYVGRESRKLGLKSVVMRVKGFT FK+K
Sbjct: 181 NKGNTKLKASAGRLEELKGGPKLSRYAAEAVAEYVGRESRKLGLKSVVMRVKGFTIFKRK 240

Query: 241 KQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           +QAI+SWR GFTDSR+DQNPIVY+EDTTRRAHNGCRLPK+RRV
Sbjct: 241 RQAIISWRAGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 283

[Close]

BLAST of CsaV3_4G009410 vs. NCBI nr
Match: XP_022999735.1 (probable ribosomal protein S11, mitochondrial [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 3.7e-94
Identity = 197/286 (68.88%), Postives = 217/286 (75.87%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHR---SDLTGSLQP 60
           M +L L HLSSLFRSSSLS   SFS SR+SISPF G+D  S M SLH    SDL+GS+Q 
Sbjct: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60

Query: 61  HNQFSGCL----RDSANVGREIVGRGWKSMGVQGPSSGLARPSE---------------- 120
             Q SGC+     DS NVGREIVGR WK++G QGP  GLAR SE                
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 --------GRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVT 180
                   GRN K MNFVRGILEE+   F G+ QF RP NMEHNADIVH+KLMRNN+F+T
Sbjct: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDNKGNTKLKASAGRLE---GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTDNKGNTKLKASAGRLE   GG KLSRY+A++ AEYVGRESRKLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240

Query: 241 KKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           KKKKQAILSWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPK+RRV
Sbjct: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CsaV3_4G009410 vs. ExPASy Swiss-Prot
Match: Q8VZT8 (Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD3 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-46
Identity = 115/266 (43.23%), Postives = 162/266 (60.90%), Query Frame = 0


Query: 10  SSLFRSSSLSPAPSFSPSRL-------------SISPFIGSDAPSRMSSLHRSDLTGSLQ 69
           S L  +  +  +P  +PS L              ++ F   +AP    S  RS L  SL 
Sbjct: 55  SGLSNTGRIGSSPEPNPSTLRTFGDMKAGLLNRGVNGFSAPNAPPTFKSSLRSRLPNSLP 114

Query: 70  PHNQFSGCLRDSANVGREIVGRGWKSMGVQG-----PSSGLARPS--EGRNLKPMNFVRG 129
             +QF        N G    G G+ +  +        SS L + +   G     ++FVR 
Sbjct: 115 --DQFGQTNPGLPNTG----GSGFSAPSLSSYENFTQSSSLLKENSRSGGKSSDLDFVRE 174

Query: 130 ILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGR---L 189
           ++E+E R   G     +  N+E NADI+HIK++RNN+FVTVTD+KGN K KA++G    L
Sbjct: 175 VIEDEGRRTAGIFSHFQRPNLETNADIIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDL 234

Query: 190 EGGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTD 249
           +GG K++ Y+AD+ AE +GR ++ +GLKSVV++V GFT F KKK+AI+++RDGFT+SR+D
Sbjct: 235 KGGRKMTNYTADATAENIGRRAKAMGLKSVVVKVNGFTHFGKKKKAIIAFRDGFTNSRSD 294

Query: 250 QNPIVYVEDTTRRAHNGCRLPKKRRV 253
           QNPIVY+EDTTR+AHNGCRLP+KRRV
Sbjct: 295 QNPIVYIEDTTRKAHNGCRLPRKRRV 314

[Close]

BLAST of CsaV3_4G009410 vs. ExPASy Swiss-Prot
Match: P46746 (Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.5e-10
Identity = 40/125 (32.00%), Postives = 68/125 (54.40%), Query Frame = 0


Query: 130 MEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGRL--EGGAKLSRYSADSIAEYVGRE 189
           +E  + IVHI+   NN+ +T+TD +GNT+   SAG L  +   K + Y++ + AE +  +
Sbjct: 13  IEKKSGIVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSRKSTVYASGAAAEALASK 72

Query: 190 SRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLP 249
           +   G +++++++KG  + KK               +     I  +++ T  AHNGCR P
Sbjct: 73  AFNEGYRTIIVKIKGLGYGKK---------SAIRGLQKSNLVIKQIQEVTPIAHNGCRPP 128

Query: 250 KKRRV 253
           KKRRV
Sbjct: 133 KKRRV 128

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BLAST of CsaV3_4G009410 vs. ExPASy Swiss-Prot
Match: P26870 (Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS11 PE=3 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 7.7e-10
Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 128 SNMEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGRL--EGGAKLSRYSADSIAEYVG 187
           +NM+    I +I+    N+ +T+TD  GNTK  +S+G +  +G  + + Y+A + AE   
Sbjct: 8   TNMQKKHCITYIQSTFGNTIITLTDYNGNTKTWSSSGSVGFKGSRRSTNYAAQATAENAA 67

Query: 188 RESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCR 247
           R + +LG K V +R+KG  + K+     L         +     I  + D T   HNGCR
Sbjct: 68  RVAIQLGFKFVEVRIKGLGYGKESSLRGL---------KLGGLIITKIRDVTPTPHNGCR 125

Query: 248 LPKKRRV 253
            PKKRRV
Sbjct: 128 PPKKRRV 125

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BLAST of CsaV3_4G009410 vs. ExPASy Swiss-Prot
Match: A7FZ46 (30S ribosomal protein S11 OS=Clostridium botulinum (strain ATCC 19397 / Type A) OX=441770 GN=rpsK PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 48/126 (38.10%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 129 NMEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGRL--EGGAKLSRYSADSIAEYVGR 188
           N+EH     HIK   NNS VT+TD+ GNT   ASAG L   G  K + ++A   AE   +
Sbjct: 18  NVEHGC--AHIKSTFNNSIVTITDSVGNTLSWASAGGLGFRGSRKSTPFAAQMAAETAAK 77

Query: 189 ESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRL 248
            + + GLKS+ + VKG      ++ AI S +    +       +  ++D T   HNGCR 
Sbjct: 78  AAMEHGLKSIEVYVKGPG--SGREAAIRSLQAAGLE-------VTLIKDVTPIPHNGCRP 132

Query: 249 PKKRRV 253
           PK+RRV
Sbjct: 138 PKRRRV 132

[Close]

BLAST of CsaV3_4G009410 vs. ExPASy Swiss-Prot
Match: C3KVM4 (30S ribosomal protein S11 OS=Clostridium botulinum (strain 657 / Type Ba4) OX=515621 GN=rpsK PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 48/126 (38.10%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 129 NMEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGRL--EGGAKLSRYSADSIAEYVGR 188
           N+EH     HIK   NNS VT+TD+ GNT   ASAG L   G  K + ++A   AE   +
Sbjct: 18  NVEHGC--AHIKSTFNNSIVTITDSVGNTLSWASAGGLGFRGSRKSTPFAAQMAAETAAK 77

Query: 189 ESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRL 248
            + + GLKS+ + VKG      ++ AI S +    +       +  ++D T   HNGCR 
Sbjct: 78  AAMEHGLKSIEVYVKGPG--SGREAAIRSLQAAGLE-------VTLIKDVTPIPHNGCRP 132

Query: 249 PKKRRV 253
           PK+RRV
Sbjct: 138 PKRRRV 132

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BLAST of CsaV3_4G009410 vs. ExPASy TrEMBL
Match: A0A0A0KVQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 252/277 (90.97%), Postives = 252/277 (90.97%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60
           MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ
Sbjct: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60

Query: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSE----------------------- 120
           FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSE                       
Sbjct: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSEGVSIPYSISSRCYGEYDNRPNPP 120

Query: 121 --GRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180
             GRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG
Sbjct: 121 DTGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180

Query: 181 NTKLKASAGRLEGGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILS 240
           NTKLKASAGRLEGGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILS
Sbjct: 181 NTKLKASAGRLEGGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILS 240

Query: 241 WRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           WRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV
Sbjct: 241 WRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 277

[Close]

BLAST of CsaV3_4G009410 vs. ExPASy TrEMBL
Match: A0A5A7TPI6 (Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00350 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107
Identity = 218/281 (77.58%), Postives = 229/281 (81.49%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60
           MPKLSLSHLS LFRSSSLS +PSFSPSRLSISPFIGSDAPSR SS   S LTGSLQPHN 
Sbjct: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60

Query: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLAR-------------------------P 120
           FSG      +VGREIVGRGWK+MGVQGPS GLAR                         P
Sbjct: 61  FSG------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPP 120

Query: 121 SEGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180
             GRNLK +NFVRGILEE+E+ F   PQ+LRP+NMEHNADIVHIKLMRNN+FVTVTDNKG
Sbjct: 121 DTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKG 180

Query: 181 NTKLKASAGRLE----GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240
           NTKLKASAGRLE    GGAKLSRYS DSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ
Sbjct: 181 NTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240

Query: 241 AILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           AILSWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPKKRRV
Sbjct: 241 AILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275

[Close]

BLAST of CsaV3_4G009410 vs. ExPASy TrEMBL
Match: A0A1S3C2M0 (probable ribosomal protein S11, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495763 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107
Identity = 218/281 (77.58%), Postives = 229/281 (81.49%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60
           MPKLSLSHLS LFRSSSLS +PSFSPSRLSISPFIGSDAPSR SS   S LTGSLQPHN 
Sbjct: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60

Query: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLAR-------------------------P 120
           FSG      +VGREIVGRGWK+MGVQGPS GLAR                         P
Sbjct: 61  FSG------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPP 120

Query: 121 SEGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180
             GRNLK +NFVRGILEE+E+ F   PQ+LRP+NMEHNADIVHIKLMRNN+FVTVTDNKG
Sbjct: 121 DTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKG 180

Query: 181 NTKLKASAGRLE----GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240
           NTKLKASAGRLE    GGAKLSRYS DSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ
Sbjct: 181 NTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240

Query: 241 AILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           AILSWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPKKRRV
Sbjct: 241 AILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275

[Close]

BLAST of CsaV3_4G009410 vs. ExPASy TrEMBL
Match: A0A6J1KGF8 (probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493991 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.8e-94
Identity = 197/286 (68.88%), Postives = 217/286 (75.87%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHR---SDLTGSLQP 60
           M +L L HLSSLFRSSSLS   SFS SR+SISPF G+D  S M SLH    SDL+GS+Q 
Sbjct: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60

Query: 61  HNQFSGCL----RDSANVGREIVGRGWKSMGVQGPSSGLARPSE---------------- 120
             Q SGC+     DS NVGREIVGR WK++G QGP  GLAR SE                
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 --------GRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVT 180
                   GRN K MNFVRGILEE+   F G+ QF RP NMEHNADIVH+KLMRNN+F+T
Sbjct: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDNKGNTKLKASAGRLE---GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTDNKGNTKLKASAGRLE   GG KLSRY+A++ AEYVGRESRKLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240

Query: 241 KKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           KKKKQAILSWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPK+RRV
Sbjct: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CsaV3_4G009410 vs. ExPASy TrEMBL
Match: A0A6J1FTT5 (probable ribosomal protein S11, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111447246 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.5e-93
Identity = 194/286 (67.83%), Postives = 217/286 (75.87%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSL---HRSDLTGSLQP 60
           M +L   HLSSLFRSSSLS   SFS SRLSISPF G+DA S MSSL   H S+++GS+Q 
Sbjct: 1   MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQL 60

Query: 61  HNQFSGCLR----DSANVGREIVGRGWKSMGVQGPSSGLARPSE---------------- 120
             Q SGC+     DS NVGREIVGR WK++G QGP  GLAR SE                
Sbjct: 61  DRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 --------GRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVT 180
                   GRN K MNFVRGILEE+   F G+ QF RP NMEHNADIVH+KLMRNN+F+T
Sbjct: 121 DGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDNKGNTKLKASAGRLE---GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTDNKGNTKLKAS+GRLE   GG KLSRY+A++ AEYVGRES+KLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYF 240

Query: 241 KKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           KKKKQAILSWRDGFTDS+ DQNPIVY+EDTTRRAHNGCRLPK+RRV
Sbjct: 241 KKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CsaV3_4G009410 vs. TAIR 10
Match: AT1G31817.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-47
Identity = 115/266 (43.23%), Postives = 162/266 (60.90%), Query Frame = 0


Query: 10  SSLFRSSSLSPAPSFSPSRL-------------SISPFIGSDAPSRMSSLHRSDLTGSLQ 69
           S L  +  +  +P  +PS L              ++ F   +AP    S  RS L  SL 
Sbjct: 55  SGLSNTGRIGSSPEPNPSTLRTFGDMKAGLLNRGVNGFSAPNAPPTFKSSLRSRLPNSLP 114

Query: 70  PHNQFSGCLRDSANVGREIVGRGWKSMGVQG-----PSSGLARPS--EGRNLKPMNFVRG 129
             +QF        N G    G G+ +  +        SS L + +   G     ++FVR 
Sbjct: 115 --DQFGQTNPGLPNTG----GSGFSAPSLSSYENFTQSSSLLKENSRSGGKSSDLDFVRE 174

Query: 130 ILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKGNTKLKASAGR---L 189
           ++E+E R   G     +  N+E NADI+HIK++RNN+FVTVTD+KGN K KA++G    L
Sbjct: 175 VIEDEGRRTAGIFSHFQRPNLETNADIIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDL 234

Query: 190 EGGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTD 249
           +GG K++ Y+AD+ AE +GR ++ +GLKSVV++V GFT F KKK+AI+++RDGFT+SR+D
Sbjct: 235 KGGRKMTNYTADATAENIGRRAKAMGLKSVVVKVNGFTHFGKKKKAIIAFRDGFTNSRSD 294

Query: 250 QNPIVYVEDTTRRAHNGCRLPKKRRV 253
           QNPIVY+EDTTR+AHNGCRLP+KRRV
Sbjct: 295 QNPIVYIEDTTRKAHNGCRLPRKRRV 314

[Close]

BLAST of CsaV3_4G009410 vs. TAIR 10
Match: ATCG00750.1 (ribosomal protein S11 )

HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05
Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 0


Query: 136 IVHIKLMRNNSFVTVTDNKGNTKLKASAGR--LEGGAKLSRYSADSIAEYVGRESRKLGL 195
           ++H++   NN+ VTVTD +G     +SAG     G  + + ++A + A    R     G+
Sbjct: 29  VIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGNAIRAVVDQGM 88

Query: 196 KSVVMRVKGFTFFKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 253
           +   +R+KG    +      +  R G          + +V D T   HNGCR PKKRRV
Sbjct: 89  QRAEVRIKGPGLGRDAALRAIR-RSGIL--------LSFVRDVTPMPHNGCRPPKKRRV 138

The following BLAST results are available for this feature:

BLAST of CsaV3_4G009410 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649303.1	3.0e-136	100.00	hypothetical protein Csa_014520 [Cucumis sativus]	[more]
XP_004137167.1	4.5e-132	90.97	probable ribosomal protein S11, mitochondrial [Cucumis sativus]	[more]
XP_008455641.1	2.2e-107	77.58	PREDICTED: probable ribosomal protein S11, mitochondrial [Cucumis melo] >KAA0045...	[more]
XP_038903066.1	1.8e-96	69.96	probable ribosomal protein S11, mitochondrial [Benincasa hispida]	[more]
XP_022999735.1	3.7e-94	68.88	probable ribosomal protein S11, mitochondrial [Cucurbita maxima]	[more]

BLAST of CsaV3_4G009410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZT8	2.3e-46	43.23	Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
P46746	3.5e-10	32.00	Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 ...	[more]
P26870	7.7e-10	33.86	Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS11 P...	[more]
A7FZ46	1.0e-09	38.10	30S ribosomal protein S11 OS=Clostridium botulinum (strain ATCC 19397 / Type A) ...	[more]
C3KVM4	1.0e-09	38.10	30S ribosomal protein S11 OS=Clostridium botulinum (strain 657 / Type Ba4) OX=51...	[more]

BLAST of CsaV3_4G009410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVQ8	2.2e-132	90.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1	[more]
A0A5A7TPI6	1.1e-107	77.58	Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3C2M0	1.1e-107	77.58	probable ribosomal protein S11, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1KGF8	1.8e-94	68.88	probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FTT5	1.5e-93	67.83	probable ribosomal protein S11, mitochondrial OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CsaV3_4G009410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31817.1	1.6e-47	43.23	Ribosomal L18p/L5e family protein	[more]
ATCG00750.1	2.0e-05	30.25	ribosomal protein S11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80	Ribosomal protein S11	coord: 125..252 e-value: 9.4E-30 score: 105.5
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 136..251 e-value: 2.5E-10 score: 40.7
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 68..252
IPR001971	Ribosomal protein S11	HAMAP	MF_01310	Ribosomal_S11	coord: 94..252 score: 14.860643
None	No IPR available	PANTHER	PTHR11759:SF34	RIBOSOMAL PROTEIN S11, MITOCHONDRIAL-RELATED	coord: 68..252
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 134..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G009410.1	CsaV3_4G009410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome