CsaV3_4G008380 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G008380
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 5871225 .. 5871405 (-)
RNA-Seq ExpressionCsaV3_4G008380
SyntenyCsaV3_4G008380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAACCCAGTCGAAGCATTCAGTTTCCTTCGCGTCTGCTCTCCATTCGTGAAGCGCAGTCGCCGACCGCTACTGATCTCTGCCATCTGTCTCAAGCCGTCGTGTATCCATTAGCTGAGACGCTCGTTGCCCCGTCAAGTCGCTGCCACCGCATCGCGTTGTTCGGATCTGAACCAAGCG

mRNA sequence

CTAAAACCCAGTCGAAGCATTCAGTTTCCTTCGCGTCTGCTCTCCATTCGTGAAGCGCAGTCGCCGACCGCTACTGATCTCTGCCATCTGTCTCAAGCCGTCGTGTATCCATTAGCTGAGACGCTCGTTGCCCCGTCAAGTCGCTGCCACCGCATCGCGTTGTTCGGATCTGAACCAAGCG

Coding sequence (CDS)

CTAAAACCCAGTCGAAGCATTCAGTTTCCTTCGCGTCTGCTCTCCATTCGTGAAGCGCAGTCGCCGACCGCTACTGATCTCTGCCATCTGTCTCAAGCCGTCGTGTATCCATTAGCTGAGACGCTCGTTGCCCCGTCAAGTCGCTGCCACCGCATCGCGTTGTTCGGATCTGAACCAAGCG

Protein sequence

LKPSRSIQFPSRLLSIREAQSPTATDLCHLSQAVVYPLAETLVAPSSRCHRIALFGSEPSX
Homology
[Close]
BLAST of CsaV3_4G008380 vs. NCBI nr
Match: KAE8649261.1 (hypothetical protein Csa_015416, partial [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 8.3e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  LKPSRSIQFPSRLLSIREAQSPTATDLCHLSQAVVYPLAETLVAPSSRCHRIALFGSEPS 60
          LKPSRSIQFPSRLLSIREAQSPTATDLCHLSQAVVYPLAETLVAPSSRCHRIALFGSEPS
Sbjct: 1  LKPSRSIQFPSRLLSIREAQSPTATDLCHLSQAVVYPLAETLVAPSSRCHRIALFGSEPS 60

The following BLAST results are available for this feature:
BLAST of CsaV3_4G008380 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649261.18.3e-24100.00hypothetical protein Csa_015416, partial [Cucumis sativus][more]
BLAST of CsaV3_4G008380 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G008380 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G008380 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G008380.1CsaV3_4G008380.1mRNA