CsaV3_4G008310 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAGCTCTAATCTATGTTGAGAGTTGAAGTTGGAGAGCAGGTGATCTATCCAATCCAATCACAAAAATGCAATGGGTTTATACAATGGTTATAAGTTTCAAAGCGCAATTTGATCATTTATATAACTAAATCACCAAACTCAAATGTTCGATTTTGGATTTATGGCCATTTGGGCTGTTGGGTCCTTCGGATTCTTCCTCTGCTGCAAACCCCTTTCGGACCCATCTCGCCTTCGCCGTTTTCTTCATCGGTCTCCACCTTATGGACTGCCACTTTACTCGGATGCCATACATTCACATGTAACTCACTCTCCATTCTCCTACATTTTCAAGTTCGCCGGAAATTTTCTTCTTATGGGTTCAACGAAACTTTGTATTTTTTTTTCTTTGCTTTCCTGTCTCATTCTAACTCCCCACCATAATTTTCTCCCTTTAACATCTCTGTTTTAGCTTGCAAGGAAGTGGCCATGGATTTTCTGGCTTCAGCTGCGTTCTTTCGGTTTTAGAACAAGTGGGGGTCAGTATTGTGAAGGGATAGGGAAGGAAGTTGAAGGGCAATGGGACTTAATTATTAACATACATTCCTGCATTTAAGACCTTGTTCTTCGTTGCTACTAGTGTCCTTTAACAATTATGGATAATTTGAGCTTTGGAGGACAACAAATGCAAGGGTAGGACCGAAAGGGTGGGGTTTGAACTCCAATCACGATAGAAGAAGTCGATGTTTTAACCGCTTAGCTATGCTGATGTTAAGATTTTGTTTTATTTTATTTTATTTTTGGCTTATATTCATGGGAAATATGTGAACACAGCAAATATTTATTTTCCTGGCGGGTCGGATTAATAGAAAACATGAATTTGAGCTAGGCTTTAGGACATTTCTTTGGTTGGATACAATGAAGGAAGTTAGTCACTTCATTTTGGAATGCAGTCACCAATATTGGTTGGATTATGTTCCTCATTTTGGAGTTGAAACATAGATAACCTTTCACATTATTGTTTTGACACTCATCAGTGATGGCATGTACATCTAAGCAACCACCAAAAGATTGGAGCGATAATGAAACTCTTTTTATACATTGTTTTTCATTGATTATTTTATAGCATTAATATCTACTAGTCAGATAGAAGCGAGGGGTCAAAAGAGAAAATATAAGATGTTTCAATTCGTTGTTGCAAGACATTTATTTCATTGCATTTCTGAATGTATTACAGGAGATTATTAGGTACAACATTTACAGTTAAGCTTGCCCCAAATCCTGCCCTCTGGAAGATTTCTTATTACCCAGTAGCCAATATAAATTTTCCTTCGAATGCTGCGCCAATTAATCATCAGATGTCTATAGTAAGGAATGATTCAGTCTTTTCTCCTTTCAATATCTTCAACAGAACGAGTTTTTCACAAGCCTTCCTGTTCATGGTTGATGAGGGTAGAAATTCCAACTTTGGTGAGTGCTACAAGTCTAAGTGTTCCTCATGTTCTATTGAGAAGCAGGTTTTGAGCAACAAAGATGATTCTCCAGAAAATCTTGAGACTGAAAATGACAAGGAATGGCAAAGACGAAAAAAGATAGGACTGGCAAATAAAGGTAGAGTGCCATGGAACAAGGGCAAGAAACACAACCTGGGTAAGAACATTTAGTAGGAAGAAGTGGTGAATTTTAAGGCTAGGTTACACTCAGGTGGAGTTTGGGATTTTAACCTTTAATTATCTGCAGAAACTCGTACACGAATCAAGCAGAGAACAATTGAAGCCTTGAGAGACCCCGAGGTGAGGTTTTCCCAACTTATGTTTATCTGTACTTTCTTGCTGCTGTTGAACTGAATTTAGGCTTTCTGCACATTGTCGATTCCTGTCTCGCTCCAAACATCCTACTATTTGTTGACATACATGGCTCTCTTCCCACTGCTAGTCTTTTCCATCTAATACACGTTAAAAAGGGAAAATAAGCATTGAAAGATGATGGAAAAGGAAAGCATATTTTGCACGTTCAGTATGGATAGTTCAACTTTTAGATCGACTCACCAATCATATTCCCCAATCTAAAGTTCTCAACTTTTTCATTTCTCCTTGAATATTGCAGGTGAGAAGGAAGATGTCCGAATATCCCCGCATTCACAGGTTTCATCTTATTCTTTCACATTGTATTTCTTAATTCTTAAATGAATTCGAAAAATGCGCTGTTTAACCATAAGTTTGGAAGATGCCATATAGGCGGTTGTATTTTTACATGTTATAATCATGTTTTCAGCGTAATGATGGAAATGGGTACTAGGAGGGTAGAGTAGCTGGACAACAGATTATGAGGATATGTATCAGGTGGTTGATGTGTTGTTTTAGTATGTTAGAAATTAGAACCGAAGGTGGATGGAATCACGAGGGAAATTACTACCTGGGCATTAAATGATTAGTAGAAAATAAATGGAAAAAAGTTTAAGGATTCAAACATAAGGTTGGAAGTTTAGATAAACTATATAAATTGGTCACATAGTAGGTGCTTGTACGTGGAAGATTGCTGGTTTTCCTTGTGCATAACAGAAGAACTAAAACCACATGATTTTAGACTTTGTTAAATATTTATATTAAAAGCAAAAGTTTCTTGCAGCATTTTCATTTTGGTAAAACCGCTAACTTTTTTTTATAGAATTAATAAGAGGTCTAATGTAAGTCTAAATTGTAAACCAGCAATCTACACTAAAGATCTCTTATAAAACAGAAGAGGGGGGAAAATCCCGTTTTAGGATCTCCCCTGAAATCATAAATGTCTTCTTATCTTCGATTATGTTGTAACCATCCTGGCCTATAGTTCAATAAGGCTGTGGGAAAAGAATGCTCGACTCTCATAATCCTATAATTGATGTCATTGACTCCAAAATCTCAACATTTTGCACTTTAACCTGTGCCATTAAAATATTAAAAAACTGTGTTTGAATATTCACCGAAACTTATTAGTTAAGAGAGTTTCTTCATCATCAAGTGGAACTGTTCGGCTTGATGAGGCAAATCTCGTCTTTTCATAAGGTATTGACATGCTAGGCAGTTGAATCGTCCATTGTTCTATTTGCAGTGATCAGGTAAAGGTTAAAATTAGCTCTTCACTCAGACGTGTTTGGGGAAAGAGACTAATGAAGAAGAGATTAAATGAGACATTCTTTCTATCGTGGATGGAAAGCATTGCTGTTGCTGCAAAGAAAGGAGGGAAGGAAGAACAAGAACTCGACTGGGACAGCTATGACAAGATAAAACAAGAAACACTTCACCAAGAGCTTCGACGGGTTGCAGAGAAGGAAAAGTTAAAAGCGATGAGAGAGAATGCGAAAATGAAAAAAGTCCAAAGGAGGGTTGGTAAGAAAGAAAAAGGGGATGACAATGCCAAAACGAAGAAGTTGAAAATGTGTTCCAGAAGAAGAGATGAGGGGAAAAGAAAGGGAAAAGAAGATGACAACCTGAGAAAGAAGAAGAAATCGACTACCATTGAGAGATCAAAGCTTAAGCAGAGATTGAAAAAGGTAAACATCAGGGAGGTTCTGTTGATTAACTCAAATAGTTTGATCGAAATTGTTGTTCCTCGAGTAGAAATGTGAAATTTGTGATTCCTCATTTCTTCTAGATGAATCTAAATGATAGCAAGCATGCCATGAACGGATCTATAACAAAAAATCCACCTATCACAACAACTTGGAAATGTAAATCTTTTGGCCAGCTTTCTTCATTTTAATTTGCCAGTGCTCTGAAATGTAAAATGAACTATCAATACAAATGCAGGTTTATGATATCAAGGATCTTCTCATGTTTTTATGTCTTCTTATGTTCATGTTATCCTCTTTCGCTTGTCTTTGAATGTAGATTCGCAAAAAGATTTCAATAAATGGTGCAGTCACTGCTCAAGGAAGTATAGCATCAGTGGCACCGCAAAACCCATGCTGGGAAAAACTGGATCTGGATCTCATAAAGAAAGGTCAAACGTGGAAAGAAGCATCACTGGCAGATCAAATTCAAGTTGCTAAGAATAGAAAAGCTGAATCTACAGCCTGCAAAGTTCTTATAGCCTCTACTTTGGCGTTCCAGTGCACCGGGGTTGCAGAAAGATAACCTTCAACTGATCTTTACTGCTTGCAAGAAGAGCAACTATCTGGTGTCTGAAGGGGTCTTTTCCTCCCATTCCAGGTGATTTTCATTTTATCAATAACTTATGTATTTATATGTTATTAATTTTTCTTAAAAGGTGCGAACTAAGGACTTCTCTTACTCTCTGTCGCAATTCCATTGCAACATGATATGATAGTAATTCTTCTACTGCATAACGCACACACAACAATGCTTATATATGTATCTTTTACTTGTCTGCAGATTCTTGGAACATTTAGATCCATTAGAGTTACACGAAGATCGTTCAATTCTACACAATTAAAAAGGTTAAAACTCGGGAGGAGTGTTGGAATACTTGAAGAAAAGGCAGTGACAACAACTGACAAAAACTTTTACCCTCAGTATGAGCAAAAGCTCAATGTCCATGCCAACAGAAAAAAATAAATTGACTTTGCCTTTTTTCCTTTCAACTTAAGCAATTGAATTATAGAAAAGAAAAGTTAACAATGGAACATTTGATATGAGTTTTTTTTAGTATTTCAATCAAATCATTGTGCAAAAGAATAGTAGTTCAATCAAATCATTGTGCAAAAGAATA ATGGACTGCCACTTTACTCGGATGCCATACATTCACATGAGATTATTAGGTACAACATTTACAGTTAAGCTTGCCCCAAATCCTGCCCTCTGGAAGATTTCTTATTACCCAGTAGCCAATATAAATTTTCCTTCGAATGCTGCGCCAATTAATCATCAGATGTCTATAGTAAGGAATGATTCAGTCTTTTCTCCTTTCAATATCTTCAACAGAACGAGTTTTTCACAAGCCTTCCTGTTCATGGTTGATGAGGGTAGAAATTCCAACTTTGGTGAGTGCTACAAGTCTAAGTGTTCCTCATGTTCTATTGAGAAGCAGGTTTTGAGCAACAAAGATGATTCTCCAGAAAATCTTGAGACTGAAAATGACAAGGAATGGCAAAGACGAAAAAAGATAGGACTGGCAAATAAAGGTAGAGTGCCATGGAACAAGGGCAAGAAACACAACCTGGAAACTCGTACACGAATCAAGCAGAGAACAATTGAAGCCTTGAGAGACCCCGAGGTGAGAAGGAAGATGTCCGAATATCCCCGCATTCACAGTGATCAGGTAAAGGTTAAAATTAGCTCTTCACTCAGACGTGTTTGGGGAAAGAGACTAATGAAGAAGAGATTAAATGAGACATTCTTTCTATCGTGGATGGAAAGCATTGCTGTTGCTGCAAAGAAAGGAGGGAAGGAAGAACAAGAACTCGACTGGGACAGCTATGACAAGATAAAACAAGAAACACTTCACCAAGAGCTTCGACGGGTTGCAGAGAAGGAAAAGTTAAAAGCGATGAGAGAGAATGCGAAAATGAAAAAAGTCCAAAGGAGGGTTGGTAAGAAAGAAAAAGGGGATGACAATGCCAAAACGAAGAAGTTGAAAATGTGTTCCAGAAGAAGAGATGAGGGGAAAAGAAAGGGAAAAGAAGATGACAACCTGAGAAAGAAGAAGAAATCGACTACCATTGAGAGATCAAAGCTTAAGCAGAGATTGAAAAAGATTCGCAAAAAGATTTCAATAAATGGTGCAGTCACTGCTCAAGGAAGTATAGCATCAGTGGCACCGCAAAACCCATGCTGGGAAAAACTGGATCTGGATCTCATAAAGAAAGGTCAAACGTGGAAAGAAGCATCACTGGCAGATCAAATTCAAGTTGCTAAGAATAGAAAAGCTGAATCTACAGCCTGCAAAGTTCTTATAGCCTCTACTTTGGCGTTCCAGTGCACCGGGGTTGCAGAAAGATAA ATGGACTGCCACTTTACTCGGATGCCATACATTCACATGAGATTATTAGGTACAACATTTACAGTTAAGCTTGCCCCAAATCCTGCCCTCTGGAAGATTTCTTATTACCCAGTAGCCAATATAAATTTTCCTTCGAATGCTGCGCCAATTAATCATCAGATGTCTATAGTAAGGAATGATTCAGTCTTTTCTCCTTTCAATATCTTCAACAGAACGAGTTTTTCACAAGCCTTCCTGTTCATGGTTGATGAGGGTAGAAATTCCAACTTTGGTGAGTGCTACAAGTCTAAGTGTTCCTCATGTTCTATTGAGAAGCAGGTTTTGAGCAACAAAGATGATTCTCCAGAAAATCTTGAGACTGAAAATGACAAGGAATGGCAAAGACGAAAAAAGATAGGACTGGCAAATAAAGGTAGAGTGCCATGGAACAAGGGCAAGAAACACAACCTGGAAACTCGTACACGAATCAAGCAGAGAACAATTGAAGCCTTGAGAGACCCCGAGGTGAGAAGGAAGATGTCCGAATATCCCCGCATTCACAGTGATCAGGTAAAGGTTAAAATTAGCTCTTCACTCAGACGTGTTTGGGGAAAGAGACTAATGAAGAAGAGATTAAATGAGACATTCTTTCTATCGTGGATGGAAAGCATTGCTGTTGCTGCAAAGAAAGGAGGGAAGGAAGAACAAGAACTCGACTGGGACAGCTATGACAAGATAAAACAAGAAACACTTCACCAAGAGCTTCGACGGGTTGCAGAGAAGGAAAAGTTAAAAGCGATGAGAGAGAATGCGAAAATGAAAAAAGTCCAAAGGAGGGTTGGTAAGAAAGAAAAAGGGGATGACAATGCCAAAACGAAGAAGTTGAAAATGTGTTCCAGAAGAAGAGATGAGGGGAAAAGAAAGGGAAAAGAAGATGACAACCTGAGAAAGAAGAAGAAATCGACTACCATTGAGAGATCAAAGCTTAAGCAGAGATTGAAAAAGATTCGCAAAAAGATTTCAATAAATGGTGCAGTCACTGCTCAAGGAAGTATAGCATCAGTGGCACCGCAAAACCCATGCTGGGAAAAACTGGATCTGGATCTCATAAAGAAAGGTCAAACGTGGAAAGAAGCATCACTGGCAGATCAAATTCAAGTTGCTAAGAATAGAAAAGCTGAATCTACAGCCTGCAAAGTTCTTATAGCCTCTACTTTGGCGTTCCAGTGCACCGGGGTTGCAGAAAGATAA MDCHFTRMPYIHMRLLGTTFTVKLAPNPALWKISYYPVANINFPSNAAPINHQMSIVRNDSVFSPFNIFNRTSFSQAFLFMVDEGRNSNFGECYKSKCSSCSIEKQVLSNKDDSPENLETENDKEWQRRKKIGLANKGRVPWNKGKKHNLETRTRIKQRTIEALRDPEVRRKMSEYPRIHSDQVKVKISSSLRRVWGKRLMKKRLNETFFLSWMESIAVAAKKGGKEEQELDWDSYDKIKQETLHQELRRVAEKEKLKAMRENAKMKKVQRRVGKKEKGDDNAKTKKLKMCSRRRDEGKRKGKEDDNLRKKKKSTTIERSKLKQRLKKIRKKISINGAVTAQGSIASVAPQNPCWEKLDLDLIKKGQTWKEASLADQIQVAKNRKAESTACKVLIASTLAFQCTGVAER* Homology
BLAST of CsaV3_4G008310 vs. NCBI nr
Match: XP_011653304.1 (uncharacterized protein LOC101207813 isoform X1 [Cucumis sativus] >KGN53591.1 hypothetical protein Csa_014799 [Cucumis sativus]) HSP 1 Score: 787.3 bits (2032), Expect = 6.2e-224 Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. NCBI nr
Match: XP_031739510.1 (uncharacterized protein LOC101207813 isoform X2 [Cucumis sativus]) HSP 1 Score: 756.5 bits (1952), Expect = 1.2e-214 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. NCBI nr
Match: XP_008451721.1 (PREDICTED: uncharacterized protein LOC103492929 isoform X1 [Cucumis melo]) HSP 1 Score: 722.2 bits (1863), Expect = 2.5e-204 Identity = 385/412 (93.45%), Postives = 394/412 (95.63%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. NCBI nr
Match: XP_038897968.1 (uncharacterized protein LOC120085828 [Benincasa hispida]) HSP 1 Score: 653.3 bits (1684), Expect = 1.4e-183 Identity = 352/410 (85.85%), Postives = 368/410 (89.76%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. NCBI nr
Match: KAA0059029.1 (putative Serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Cucumis melo var. makuwa]) HSP 1 Score: 613.2 bits (1580), Expect = 1.6e-171 Identity = 334/359 (93.04%), Postives = 343/359 (95.54%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. ExPASy TrEMBL
Match: A0A0A0L0E1 (IENR2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G083650 PE=4 SV=1) HSP 1 Score: 787.3 bits (2032), Expect = 3.0e-224 Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. ExPASy TrEMBL
Match: A0A1S3BS78 (uncharacterized protein LOC103492929 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492929 PE=4 SV=1) HSP 1 Score: 722.2 bits (1863), Expect = 1.2e-204 Identity = 385/412 (93.45%), Postives = 394/412 (95.63%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. ExPASy TrEMBL
Match: A0A5A7UZS4 (Putative Serine/threonine-protein phosphatase 4 regulatory subunit 2-A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00510 PE=4 SV=1) HSP 1 Score: 613.2 bits (1580), Expect = 7.8e-172 Identity = 334/359 (93.04%), Postives = 343/359 (95.54%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. ExPASy TrEMBL
Match: A0A5D3CXK5 (Putative Serine/threonine-protein phosphatase 4 regulatory subunit 2-A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00070 PE=4 SV=1) HSP 1 Score: 610.1 bits (1572), Expect = 6.6e-171 Identity = 333/359 (92.76%), Postives = 342/359 (95.26%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. ExPASy TrEMBL
Match: A0A1S4DYR7 (uncharacterized protein LOC103492929 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492929 PE=4 SV=1) HSP 1 Score: 590.5 bits (1521), Expect = 5.4e-165 Identity = 311/336 (92.56%), Postives = 322/336 (95.83%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. TAIR 10
Match: AT1G53250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink). ) HSP 1 Score: 200.3 bits (508), Expect = 3.0e-51 Identity = 133/302 (44.04%), Postives = 193/302 (63.91%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. TAIR 10
Match: AT1G53800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins in 242 species: Archae - 2; Bacteria - 216; Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other Eukaryotes - 493 (source: NCBI BLink). ) HSP 1 Score: 86.7 bits (213), Expect = 4.9e-17 Identity = 70/256 (27.34%), Postives = 130/256 (50.78%), Query Frame = 0
BLAST of CsaV3_4G008310 vs. TAIR 10
Match: AT1G53800.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 86.7 bits (213), Expect = 4.9e-17 Identity = 70/256 (27.34%), Postives = 130/256 (50.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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