CsaV3_4G006730 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G006730
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionF-box domain-containing protein
Locationchr4: 4518921 .. 4525750 (+)
RNA-Seq ExpressionCsaV3_4G006730
SyntenyCsaV3_4G006730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTACAACAGTTGTTTACGGTTTCGTTTCTGCCACAGCTTCTCTCTCAAAGGCAACCAATTAGAAAATCAGAAATTTGAAGTTTTGTAAACAAAAACCACAAATTCTTTGAGCCGCTCATTAGGCCGGAATCAAATATCTTGTTGCTCTGTGTGCCGCTCCTCTTCCACTGTCCACCACGCACCCACAAAATGGGAACTTCTCTTCTCTCAGTTCCTGCCCCATTCTTCCACTCCTCCCATCGTTCCCGATTCACCACTTCATTCCCATTTTCATCATCTAGACCCAGCCCCTTCCTCTCTTCTTCCTCCTCCTCCTCTTCTTCATCTTCGGTTGTTGATGAAGAACTCAATTCTTCTTCCCCAGATCAACTCTCTCTTCAATCTGAATCTGACCCAGATGATTCTTCCTTCAGGTATTGTTTATATTCATTCTTTTTCTCTATATCTTCAACTCACTCTGATTCTGATGTTATATGGGTTGCGTTGTCGAATGGAATGAAAACTTTATATTATGCTGTTTAGATTTCTGTTTCTACTTGGGAGTAATATGTGGGGCATCGTTTGCGTTGTACTATGAGAACTCTGTTAGAAGCAAATTTTTCTTTAAATTTTTAGCTTGCCCCTTAGCTATTATAACCCATGCCCTTGCTCATGCTCTAGTTGATGGGTCAGATAGATTTGCCAATTTTCCATGCCATTTCTAGAAAATGGTTAAACAAACATGATGTGGCAGGAACTGTATGACCTCTAGGCTTCCATTGGTCGTACTAAATCATATTGGTGTAATTAGTTGAGAAACAAGCTGACACTGGACAAGACTTGGCTCAACTATGAAAATCACTAGTACCCCATTTTGCTCGTTCCAATTGAAGGCCATGTATTTTGGTGTGTAACTGATGTGATTTTAATGAGCCCTATAATGCATATTGCAAACTAGTTGAAAGTTTCAATTCTAAGTGTTCTTCTTACTATCGATCTGGATGTATGTTTTCAAGTCATTTTCTCTTCAGATATTATAGTAATGGGGGTCAATATTATGACTTAGAACGAGTTGTGTTTGTGTTTCATTTCTTATAAATAGAGGATGTAAGGCTTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATGCAAGGTGGAATTGCAACAGTCCCTGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCAGGTGGCAGATACAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGGGAGGACCGATGCCTCTGCTAGTGTTGGTAGAAAGGACTCGTCGAGGTACAATCCTGCGATCTCTTTTTTGACTTAAATTCTTATCTTTATGTCCCTTTTGGAGTTCATACTACTGCAGTCTAACATTCTTCCTGCGTACCGAACTTTCAAAATAACCAAACCAAATGCTTGATTCCAATTCAGTGTACTTGCTATAAATGATTGTTTGGAATGACTTTTCAAGAATTTATGGTTTCTTGTTATGACTAGGAACTCTTAGAAAAGTTATTTGACAATTGCTACGGTATAACTAGTCTGTATACTTTAGGATAGATGACTCAAATTTATGTCCATTGTTTATTAGCAGACATGCAAATTTTTAAATCTATGTCAAATGGTTGTAAGTTATTACGGGACAATTGTGCGCTTGCTGACCCTCCGTTCTATTGCTCTTTGTATAACCTTAATGTACATTGAGTTTGTCTCTCTATTTTTCAATATTAATAATAGTGAGACTCATATCGTTTTCAAAAAAATAAGAAAAAAGTTATTACGAGGCAACCACATTGGATAGTGTTAGAATTAGTGGGCTTGTTGTATGTAGAAAGCCCAAATGTTTTTTAGTCTTTTATGTTGCCCTAATTATCTTTCATTATTTTAATAGGCTTCTATTGCCTATAAATTAATTTTATAATGCTCCCCTATATCATTAATTTTATAAGTAAAATTATAAGAAAGATTTGCACTGTTGTTTTTCTCCCTGAACTTTCCACATAAAACTTGTGTTTGTTCTTCGTCTCTATTTTCAATATGGTATCAAAGCATGGTATTGACCGAACGCTAGACATCAAAACTCTTTGGAAACCAAACAGAGGAGACAGCTGCCAGTATCAGTACCGCTGTCCCCACCGCCACCATCGTTGATGCTCGAATCAGTGCGCCATGGATGAGTGGTTTCGATGCCTTCAGACAACGCCAGCCAACATGATAGTCACCCTTTACGTCGTCCACGCCTCCACGCGCCGCCGTCGGGGACCAACCCATCCAGTTTAGATCACGTTGGCCAATCCTTCTCTACCACCCTTATCTTCATCTGCGACCTATAATGTCCCCCACGTGCCGCTCCATGTTCTGCCACCTAATTCCGTCAGGTCCAACCACCACTGCTTATGTAGTCAAATCTTCAAATTTGTATGCGCCGCCACCCACTCAACATTCAAGGTTGATGAATCTTTGGCACATTCTGACCAAAATTCTTTTTAGGTATATCTCACCAGCAACTGGAAGAGCTTCGATAGTAGATTGCAGCAATTGAGGCTACCTTAGGGGTGGCATCCGACACTTTTGGTCATGGCCTTCATACACCTTTACCGGTGTATTATGAGAATCCGTTAACCTTGTTCCCCACTTTATCCTCTTCGTATACAAATAATACAGTAACAAACTCTACAAAATATTTTTCAGAGAAAAAATTAAACGACAATAAATATTTCTCATGGTCTTAGTCAGTGAAAATGGTCCTTGAAGGATGACATAAATTTGGTTTTCTGACAAGGTAAGTACCACATCCTCCACTAGGAGATCCATAGGAATAGTATTGGAAGGGAGAGAACTCTCTTCTTCGATCCACATTGATCAAATAGTATAGAGCCATAGATCAGCAAACCCTTACTTTACGCTGCAATTGCTAAGGACATTTGGGGCACAACCTAGAAACTATATTCCAAATGTTAGAATGCCTCTCGCTTATACACACTACGAAAACAAGTTCATGAGTGCACGCAAGGAACTATGGATGTCACATCCTTTTTTAACAAGCTCTCTCTTATTTGGCAGGAAATGGACCTATGCAGAGAACTAATTTGGAGCAATGGTGTGCAGTCCTTTAGAATTGAAGAGATTGACAGGATTTATGCCTTTCTTGTTGGTCTTAAGTTTGATGTAGTTCGTAGGCGTATACTGGACCAGAGACCGATTCCCTCCTTGATGGAGGTTTGTTATGAAATCCGCCTTAAGGGGAATCGTACAAGTGCTATAAATATTTCAGCAACTCCTGTTATTGACTTAGCTGCTTTTAGTGCGAGGTCCTCTACTAGTGGCAGTGACAAGAACAATGGAAATTCAATTTCTGTCTATTAGCAATGCAAGAAACAATAGCCTACCCAGGTGCAATGTTGGGAGTTACATGGTCGTCCCCCAAGAGGTTAGAAATGCTCTCCTAGTGACAAACAAAGCATTGGGCATGCGTATGTGAGTGAGCCTGCTAGACCTTCTCAACCACCTGATCCACACATGGAAACCAAACCAATCTTAGTCCCACTACTCTAGGCACCATTGTCCAATCAGGTATACCTCAGTCCTTTGGTCTTATTAGTGTTGATGAGAAAAACCTTTGAATTCTGGATTCCGGTGTCGTAGATCATTTTAACTAATTCTTCTGAACATTTTGTGTCCTATATTCCATGTGTTGGTAACAAAACAATCAGAATTGCAAATGGCTCCTTAGCTTCCATTGCTGAAAAGGGAAAGATTTCTCTCTATGCAGGGCTCTCCCTACATAATGTTTTGCATGTGCCCAAAATTTCTTATAATTTGCTACCTGTAAGCAAAATTACTCATGAGTTAAACTGAGGAGCATTCTTACCTGATCCTATTTCTTTTCAAAACTTGAGCTCGAAGAGGATGATTGAGACTGCCGAGCATAGTAGGGGACTCTACCTTCTTGATGATGGCGCCTCTTCTAGTAGCACTTCTAGGACTAGTCTTTTGTCTTCCTATTTTACTACTTTTGAACAAGAGTGTATGTTATGGCATTTTCATTTAGGCCACCCTAATTTTCAATATATGAAACATTTATTTTCTCATCTTTTCTTTAAACTTGATGTGTCTACCTTATCTTGTGATGTATGTATTCGGACTAAACAATGTTGGGTTTCTTTTCCTTCACAACCATACAAACCAACCTACCATTTCACACTTGTTCATAGTGATGTCTGGGGACCATCCAAGATAACTATCTTATCTGGGAAATGGTGGTTTGTAACCTTTATTGATGATCATACCTGTCTTACCTGGGTCTTTTTCGTCTTCGACAAATCATAGGTTACCTCCGTCTTCAAGGACTTCATCACACCATAGAAACGCAGTTCAATGCAGTGATTGCTATTCTACAAAGTAACAATGGTCGTGAGTTCCAAAACCACACCCTCAATGAGTTTTTGTTCTCCAGAGGGATTGCCCACCAAAGTTCCTATGCCTACACGTCCGAACAAAATGGGGTAGTCGAGCACAAAAGCTGTCACCTTTTGGAGTAGCTCATTCTCTTATGTTGTCTATTTCCCTTCCTATATCTGGGGCGATGTCGTTCTCACTACCACCCATCTTATCAATCGGATGCCTTTTCATGTCCTACTTTTTCAGACCCCCTTGCCATGTCTTAAAGAGTCATATCCCTCTACCCACCTCATTTCTGATGTTCCTCTTTAGGTTTTTGGGTGCACAATCTATGTTCATAACCATGGTCCTAACCCAAATAAGTTTACCCCTCGGACCTCGGGCTCATGCATGTGTTTTTGTTGGTTACTCTCTGCACCAATGAGGCTGTAAATGCTTTCATCTATCTTCTTGTAAGTACTTTGTCTCCATGGATGTCACCTTTCTTAAGGATCGTCCTTTCTTTTCCGTTAGCCTACTTCAGAGTGAGAGTGAGAATGAGGAGTCTAATTGGGTAATTTCCTTAGAGTGAGAATGAAGATGGGGGATGAGTTTGAAATTAAAGACTTTGGGAATATGAAATACTTTCTTAGAATGGAAATTGTCAGATCTAGAGAGGGCATCTCTATATCCTAGAGGAAATACACCATTGATTGGTCAACTGAGACAAGTATGTTAGGATGTTGTCCCGCCAATACACCTATTGAATTCAATGCCAAACTCAGGGATACAGGTGACAAAGTTTTGATTGGCAAAGAGAAACTTAGCGCCTAGTGGGAAAACTTGTTTATTTATCTCACACTAGGCTTGACATCTCACATACTGTGAGTACTGTTAGTCAGTTCATGTAGACTACTTGAATAACACGGAGCCAGTAAACAGAACTTTGAAGTATTTAAAAGTAACTTTTGGTAAAGGGTTGAGATTCAGGAAAACTGACACAAGGTGTATTAAGGCCTATACAGATTATGATTAGGCAGAGTCTATTGTTGATAGAAAATCTACCTCTGGGTACTGTATTTTTGTGTGGGACAATCTCGTTACTTGGAGAAGTAAGAAGGAAGGGGTTGTTGCTAGGATCAGTGCTAAAGTTGAGTAAAGGGCCATGAGTTTGGGAATTTGTAAGGACATTTGGCTCTAGAAGGTGTTATATGATCTTCATCAGAACAATGAGATGCCTATGAAACTTTTCTGCGATAATAAGGCAGCTATTGGAATTACAAATAGCCTGATCTAACATGACATAACTAAACATGTGGAGATTGATAAACACTTTATCAAAGAGAAATTGGATAGTGGTAGCATTTACATTCCTTACACACCTTCAAGCCAACTAATTGATGATATTCTCACAAAAGAGTTTCTCAGACAGAGCTTTGAGTCTTGTGTTGAGTGGGGTCTTTTTGGCATTGATAACCCAACTTGGGGCTTTGTTGTAGGTTGAAAGCTCAAAGATTTTCTTAGTCTTTTATGTTTCCCTATTTATCTTTCATACTTTTAATTAAGCTTCTATTGCCTATAAATTAATGCTCCCCTATACCATTAGTTTTATAAGAAAATAATAAGAAAGATTTGCACTTGTGGTTTTTTCTCTTTGAACTGGGTTTTCATGTAAAACTTGTATTTGTTGTTCGTCTCTACTTTCAATCAATAGTTTTTCAAAGCTTTGGGCAATCATGTGTATTAAAGTAGTATAGGATAGCCATGGTCCTTGTGCAATCAATTTCTGAGTTATCATTTTGTTTCATTTTGATCTGTTTATTCATACCAGCCTGATAGTCAGAGAAAGTTTCTGTTAGGATCAGCCATTTAAAAAAAGGGTTCGTGAGAAATGATGCAGTTTGCATAATGTGACTTCTTGTTATTCATTGTGGTTTAGGATTTTCCCAGTTGTTTTTCCATGAATTTCCTTCATATTTAACTTTGAGTTTCTAATTTTTCAATGATGCTAATTTATCCATTTTGCACAACGCTCTTTCGTCCAGCAAGAAATAGTCAGTTAAGGGGTAACTTAGACAGGAAGGAAATGAAGAATGGGATGTCAGAATTGTTTATATGGAAAAAAGATACCAAAGGTGAAAGGGGTGATTTTTGAAGAACATGCCAAAATATTTTCTCATGGTGAATTTGATTGAAATTTGGTTAGATTCTCATTTCTTTAGGCTTCTGTAATAATATCAACAAGCTTGTATTGGGAGGTTATATTTAAATGGAAAATTTTCAAGTTTAATGCTTTGTTTGAGGCTTATCAAGATTCATTCTTTGCAGAACATTGTTTCTTTTCCAGTTGCATCTGAGATGCTATGTTTGTTCTTTCATGAATGCTTCCAATCCCAAGAACATTTAACAATAGCAAT

mRNA sequence

ATGGGAACTTCTCTTCTCTCAGTTCCTGCCCCATTCTTCCACTCCTCCCATCGTTCCCGATTCACCACTTCATTCCCATTTTCATCATCTAGACCCAGCCCCTTCCTCTCTTCTTCCTCCTCCTCCTCTTCTTCATCTTCGGTTGTTGATGAAGAACTCAATTCTTCTTCCCCAGATCAACTCTCTCTTCAATCTGAATCTGACCCAGATGATTCTTCCTTCAGAGGATGTAAGGCTTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATGCAAGGTGGAATTGCAACAGTCCCTGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCAGGTGGCAGATACAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGGGAGGACCGATGCCTCTGCTAGTGTTGGTAGAAAGGACTCGTCGAGCAAGAAATAG

Coding sequence (CDS)

ATGGGAACTTCTCTTCTCTCAGTTCCTGCCCCATTCTTCCACTCCTCCCATCGTTCCCGATTCACCACTTCATTCCCATTTTCATCATCTAGACCCAGCCCCTTCCTCTCTTCTTCCTCCTCCTCCTCTTCTTCATCTTCGGTTGTTGATGAAGAACTCAATTCTTCTTCCCCAGATCAACTCTCTCTTCAATCTGAATCTGACCCAGATGATTCTTCCTTCAGAGGATGTAAGGCTTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATGCAAGGTGGAATTGCAACAGTCCCTGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCAGGTGGCAGATACAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGGGAGGACCGATGCCTCTGCTAGTGTTGGTAGAAAGGACTCGTCGAGCAAGAAATAG

Protein sequence

MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSSKK*
Homology
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BLAST of CsaV3_4G006730 vs. NCBI nr
Match: XP_004148991.1 (uncharacterized protein LOC101208661 isoform X2 [Cucumis sativus] >KGN53430.2 hypothetical protein Csa_014883 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 5.2e-78
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60
           MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ
Sbjct: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60

Query: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120
           LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV
Sbjct: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120

Query: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSSKK 159
           ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSSKK
Sbjct: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSSKK 158

[Close]
BLAST of CsaV3_4G006730 vs. NCBI nr
Match: XP_011653222.1 (uncharacterized protein LOC101208661 isoform X1 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 7.6e-77
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60
           MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ
Sbjct: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60

Query: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120
           LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV
Sbjct: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120

Query: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSSK 158
           ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS K
Sbjct: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSRK 157

[Close]
BLAST of CsaV3_4G006730 vs. NCBI nr
Match: XP_008451930.1 (PREDICTED: uncharacterized protein LOC103493082 isoform X2 [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 9.6e-72
Identity = 148/158 (93.67%), Postives = 154/158 (97.47%), Query Frame = 0 

Query: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60
           MGT+LLSVPAPFFHSSHRSRFTTS PFSSSRP+ FL SSSSSSSS+SVVDEE+NSSSPDQ
Sbjct: 1   MGTALLSVPAPFFHSSHRSRFTTSLPFSSSRPTTFL-SSSSSSSSTSVVDEEINSSSPDQ 60

Query: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120
           LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGR+QGGIATVPGFGWWPIKAYRPCPGFV
Sbjct: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFV 120

Query: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSSKK 159
           ASGGRYKRRGQSMDEVTSGGGRT+ASASV RKDSSSKK
Sbjct: 121 ASGGRYKRRGQSMDEVTSGGGRTEASASVSRKDSSSKK 157

[Close]
BLAST of CsaV3_4G006730 vs. NCBI nr
Match: XP_008451929.1 (PREDICTED: uncharacterized protein LOC103493082 isoform X1 [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 2.4e-70
Identity = 145/155 (93.55%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60
           MGT+LLSVPAPFFHSSHRSRFTTS PFSSSRP+ FL SSSSSSSS+SVVDEE+NSSSPDQ
Sbjct: 1   MGTALLSVPAPFFHSSHRSRFTTSLPFSSSRPTTFL-SSSSSSSSTSVVDEEINSSSPDQ 60

Query: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120
           LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGR+QGGIATVPGFGWWPIKAYRPCPGFV
Sbjct: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFV 120

Query: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS 156
           ASGGRYKRRGQSMDEVTSGGGRT+ASASV RKDSS
Sbjct: 121 ASGGRYKRRGQSMDEVTSGGGRTEASASVSRKDSS 154

[Close]
BLAST of CsaV3_4G006730 vs. NCBI nr
Match: TYK16544.1 (uncharacterized protein E5676_scaffold21G003600 [Cucumis melo var. makuwa])

HSP 1 Score: 271.2 bits (692), Expect = 5.8e-69
Identity = 143/155 (92.26%), Postives = 149/155 (96.13%), Query Frame = 0 

Query: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60
           MGT+LLSVPAPFFHSSHRSRFTTS PFSSSRP+ FL SSSSSSSS+SVVDEE+NSSSPDQ
Sbjct: 1   MGTALLSVPAPFFHSSHRSRFTTSLPFSSSRPTTFL-SSSSSSSSASVVDEEINSSSPDQ 60

Query: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120
           LSLQSESDPDDSSF GCKACGKEEIERGCNGEGR+QGGIATVPGFGWWPIKAYRPCPGFV
Sbjct: 61  LSLQSESDPDDSSFGGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFV 120

Query: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS 156
           ASGGRYKR GQSMDEVTSGGGRT+ASASV RKDSS
Sbjct: 121 ASGGRYKRHGQSMDEVTSGGGRTEASASVSRKDSS 154

[Close]
BLAST of CsaV3_4G006730 vs. ExPASy TrEMBL
Match: A0A0A0KUY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052700 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.2e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60
           MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ
Sbjct: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60

Query: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120
           LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV
Sbjct: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120

Query: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS 156
           ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS
Sbjct: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS 155

[Close]
BLAST of CsaV3_4G006730 vs. ExPASy TrEMBL
Match: A0A1S3BSL8 (uncharacterized protein LOC103493082 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493082 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.6e-72
Identity = 148/158 (93.67%), Postives = 154/158 (97.47%), Query Frame = 0 

Query: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60
           MGT+LLSVPAPFFHSSHRSRFTTS PFSSSRP+ FL SSSSSSSS+SVVDEE+NSSSPDQ
Sbjct: 1   MGTALLSVPAPFFHSSHRSRFTTSLPFSSSRPTTFL-SSSSSSSSTSVVDEEINSSSPDQ 60

Query: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120
           LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGR+QGGIATVPGFGWWPIKAYRPCPGFV
Sbjct: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFV 120

Query: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSSKK 159
           ASGGRYKRRGQSMDEVTSGGGRT+ASASV RKDSSSKK
Sbjct: 121 ASGGRYKRRGQSMDEVTSGGGRTEASASVSRKDSSSKK 157

[Close]
BLAST of CsaV3_4G006730 vs. ExPASy TrEMBL
Match: A0A1S3BSP7 (uncharacterized protein LOC103493082 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493082 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 145/155 (93.55%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60
           MGT+LLSVPAPFFHSSHRSRFTTS PFSSSRP+ FL SSSSSSSS+SVVDEE+NSSSPDQ
Sbjct: 1   MGTALLSVPAPFFHSSHRSRFTTSLPFSSSRPTTFL-SSSSSSSSTSVVDEEINSSSPDQ 60

Query: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120
           LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGR+QGGIATVPGFGWWPIKAYRPCPGFV
Sbjct: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFV 120

Query: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS 156
           ASGGRYKRRGQSMDEVTSGGGRT+ASASV RKDSS
Sbjct: 121 ASGGRYKRRGQSMDEVTSGGGRTEASASVSRKDSS 154

[Close]
BLAST of CsaV3_4G006730 vs. ExPASy TrEMBL
Match: A0A5D3D003 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003600 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.8e-69
Identity = 143/155 (92.26%), Postives = 149/155 (96.13%), Query Frame = 0 

Query: 1   MGTSLLSVPAPFFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSSSPDQ 60
           MGT+LLSVPAPFFHSSHRSRFTTS PFSSSRP+ FL SSSSSSSS+SVVDEE+NSSSPDQ
Sbjct: 1   MGTALLSVPAPFFHSSHRSRFTTSLPFSSSRPTTFL-SSSSSSSSASVVDEEINSSSPDQ 60

Query: 61  LSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFV 120
           LSLQSESDPDDSSF GCKACGKEEIERGCNGEGR+QGGIATVPGFGWWPIKAYRPCPGFV
Sbjct: 61  LSLQSESDPDDSSFGGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFV 120

Query: 121 ASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS 156
           ASGGRYKR GQSMDEVTSGGGRT+ASASV RKDSS
Sbjct: 121 ASGGRYKRHGQSMDEVTSGGGRTEASASVSRKDSS 154

[Close]
BLAST of CsaV3_4G006730 vs. ExPASy TrEMBL
Match: A0A6J1FN06 (uncharacterized protein LOC111447296 OS=Cucurbita moschata OX=3662 GN=LOC111447296 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.2e-57
Identity = 131/164 (79.88%), Postives = 140/164 (85.37%), Query Frame = 0 

Query: 1   MGTSLLSVP----APFFHSSHRS--RFT----TSFPFSSSRPSPFLSSSSSSSSSSSVVD 60
           MG++LLSVP    APFFHSS+ +  R +    TS  FSSSR   FLSSSSSSSSSSSVVD
Sbjct: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPITSLRFSSSRGVSFLSSSSSSSSSSSVVD 60

Query: 61  EELNSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPI 120
           EE NSS PD LSLQSESDPD SSFRGCKACGKEEIERGCNGEGR+QGGIATVPGFGWWPI
Sbjct: 61  EETNSSPPDDLSLQSESDPDGSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDS 155
           KAYRPCP FVASGGRYKRRGQSMDEVTSGG RT+ASA+ G+KDS
Sbjct: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDS 164

[Close]
BLAST of CsaV3_4G006730 vs. TAIR 10
Match: AT5G42070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-30
Identity = 81/158 (51.27%), Postives = 99/158 (62.66%), Query Frame = 0 

Query: 1   MGTSLLSVPAP----FFHSSHRSRFTTSFPFSSSRPSPFLSSSSSSSSSSSVVDEELNSS 60
           M  S+ S+  P    F + SH+SR     P+ SS  S F  + SS      ++     SS
Sbjct: 1   MANSISSISLPRCFIFNNGSHKSR-----PWPSS--SSFFLNKSSKHHPHPLLS---LSS 60

Query: 61  SPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAYRPC 120
           SP  +      D +D +F GC+ACGKEE E GCNG+GR+QGGIATVPGFGWWPIKAYRPC
Sbjct: 61  SPSSVVETDNDDDNDLTFSGCRACGKEEKESGCNGDGRIQGGIATVPGFGWWPIKAYRPC 120

Query: 121 PGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDS 155
           P FV +GGRY+R GQSMDEV  G G + +S SV   DS
Sbjct: 121 PAFVEAGGRYRRIGQSMDEVAFGRGDSKSSTSVDTSDS 148

The following BLAST results are available for this feature:
BLAST of CsaV3_4G006730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148991.15.2e-78100.00uncharacterized protein LOC101208661 isoform X2 [Cucumis sativus] >KGN53430.2 hy... [more]
XP_011653222.17.6e-7799.36uncharacterized protein LOC101208661 isoform X1 [Cucumis sativus][more]
XP_008451930.19.6e-7293.67PREDICTED: uncharacterized protein LOC103493082 isoform X2 [Cucumis melo][more]
XP_008451929.12.4e-7093.55PREDICTED: uncharacterized protein LOC103493082 isoform X1 [Cucumis melo][more]
TYK16544.15.8e-6992.26uncharacterized protein E5676_scaffold21G003600 [Cucumis melo var. makuwa][more]
BLAST of CsaV3_4G006730 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G006730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUY48.2e-77100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052700 PE=4 SV=1[more]
A0A1S3BSL84.6e-7293.67uncharacterized protein LOC103493082 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BSP71.1e-7093.55uncharacterized protein LOC103493082 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3D0032.8e-6992.26Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1FN064.2e-5779.88uncharacterized protein LOC111447296 OS=Cucurbita moschata OX=3662 GN=LOC1114472... [more]
BLAST of CsaV3_4G006730 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42070.13.3e-3051.27unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..77
NoneNo IPR availablePANTHERPTHR47721:SF2OS01G0235100 PROTEINcoord: 1..154
NoneNo IPR availablePANTHERPTHR47721OS01G0235100 PROTEINcoord: 1..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G006730.1CsaV3_4G006730.1mRNA