CsaV3_4G005860 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G005860
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionSAP30_Sin3_bdg domain-containing protein
Locationchr4: 3856558 .. 3860789 (+)
RNA-Seq ExpressionCsaV3_4G005860
SyntenyCsaV3_4G005860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTCTTTTCCATTTTGCTCATTTCAATGCTCTTCCCCTGTTTCCTTTTTCCCATTCATCACTCTTTTCTCTTTATTTCTTCTGAATTCCCACCTCTTTCTTCCCTTCTCAATCATCTCTGTTTCTCCTTTTCCTCTTCTTCCAACCCCTCCATTCCTCTTTCTTTCAAGGTAATCACAAATCACTATGCATTCATTGCTTTACTCTAATGTCCCTTCTCTGCTTTTTTAATGGGGTTTCTCATGGTTAGTGATCTTAACTCTCCCACTAATTGTGATTTTGTTACTTTCTTTTCTTGGGTTTTATCTTTTATCATTGTTTGTTCTAAGTGTACCCAATTTGGATGTGGTTTTTCTTTTTCAAATGGGTATTTCTTCTTTACCTTATTTGATCCAATTGCAATATTGGGTTTTCTTTTTGTGTTTCATAAGAGATTTTTTCTGCTGTAGAGTTCGTCTTTAGATTACTTTCTTGACTTATTGTTTTAGGAAGATGTTGAGAAAATGCGGGTGGGAGTGTAAGTAATGGTTTTTGAGCTTTTATTGTTTAATTTTGGAATTGGGGATTGGAGACTTTATTCGAATTTGTGCCGAGGTTGTTGAATGATTTTCTTTTTCTTTTACGTTTTTAGGTAATGAATTGAACTCTGGGTTCTGTTTTCTCTCCTCTAAGTTTAGGAATTCATAATCTAATCGACCTTCTAACCCTTTCCATTCTTAGCTTTTTCTTTTTGAGATATTTTATTAATTCTCTTTTATTTCATTCGTGAAGGGAATGTAAGCTGTTGGAAGTTGGCACGCATATTTGCAATTCCATAGAAAATTCCCCTGTTTGGCTTTTGGGTTGTTGGGAACACGTACGGTCTATTTGCTTCAAATTGATTTTTGGCTTTTGGGGATCAATGCTGCGGAAATGATGCCATTGTGTCACTTCTACTCAAGAGCCTATTTATGAGCTCCGATCTTATCCTGTCTTGGTGTGATTCATTTATTATCAGTACAATGTGCCCGTGAAGTAGAGATATATTTACTTCGCTTCTTCAAAGATGATGGCATTTATTGTTTCCTGATCTTGTTTGTGTAGAACACAGGTACCTATCGACTTTAATCCCTCTTCTAAAACAATTGAAAGCACATTTCCCCATTTCCTGATACTGTTCAGCTTTTGTCTTTTACTAGATACAATATACTGCTTGACATTTACTGGAGTTCGACATCTGTGAAGTTAGATTCCACTGAGGCAAGCAAAATTTATAACGTCTTACTGATCAGCGAAAGAGGGCTGTTGGTTATTATAGCTCAAGTTGAGCTTGAATTCTTGCACTATATGGACCACAAGGCTTCAGAGTATTTGGCTGCAATGTTGAAGTCTTTTGTGCTAGTTCCTTGTTTTGGTTAGGGTCGATTTAATTTTTAACTTTCGTCATCACTACCTGAAGGAAAGAAAGGAAAGAAGAAAAATGGTGGAGCCAGAGTTTTGTGCTTCCAATATACAATCTCCTTTCCGTGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCCAGGCACACTAAGGTTATTGTCACTGGAAATAATAGAACAAAGTCTGTTTTATTGGGATTGCAAGGGGTGGTTAAGAAAGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTATTTCTCATTTTCATTGTCTTTTCCCTTTGTCGTGTGTTATTTACACTGTGTACTATGAATTTTTCTGTCTCCATTTGTTTGCTTACTTGTTGTGAAAGTTACTTCAAAAGTCATAACAATGGATCAACTATGACTTTAGCAATGCTATTTTCTTTCTTTTTTAGCTTATAGTTTTTAAGCTAGAAGCCTGTGACCGGAAGGAATTCATGCACAACGTAGGCTTTATTTCATAATTATTTCGTTTTTAGTCTTCTGCTTTTTGAAGATTATGCTTGTGTTAATACCTTACAATTTTGAAACTTTAGAAGACTTTTTAAAACAATAACTAAAATTTTCAGATATGTTGTAAATCAATGGCTACTTTCCTTCGAGTGGCATTTTTGTAGTGTTCATGATGACTATCTGTGGACTAGGGCTATTTCATTTTATCTGTGTGAATTTTGATTAAATGCTTAGGAGATGGTTAACCGTTTGCTTGAAATTTCTTAGCACTATGCTAAAAGTCAGATTTTGCTTACAAAGGAGTGTTGTTTTGCTAAGCTCGAATTTTCATTTAGGTTTTGAAAAATGGGGTTGAAGTGAAGCTACAAAGGAATGCATTGAGTGTGCTGGAACATCCCACAGGAAATGAAAATGATGAACATGATTTGGACAACTCAAGTTGTAGCTCTGACATCGGAGAGAAGGACAATGATTTCTGTAAGTCATTGAAATTTTGAAATTTTGAAATTTTGGAAATGATGGGAATGGGCCTCCATGTTCCAAAATCCTTCCATTTCCTTTCTAAAGTAGATTTTATTTTACATTATGGAGAAAAACTTAATAGTGTCACCATTCATGGGCAGCTAGCAGCGTTGTTTTCCACAAACTCAGCAAACCAAAAGTGAGGCAGATTAAGCCATGGGCTCCATCTTCATCAGCAAAGTCAACTAGTCGGGGCAGCTATGGAGAAATTCAATCTATTCACATGCCAAAGTCAGGGACGGTGAGATACTTTGAAACCAACCTTTGATTTGTGTGTGTGCGCACGCACACTTTCTCTTCTTCCTTTTGGTATCATGAGTGTCCCCGGCCAAGATTTGGCTGTGGAAGGTTAGGATTTTAACATCTGATTAGCATCAAGACGTGTTTGAAGGTGATTTTAGAATAGTTTAAATCACTCTTGTAATTCTCAAAATCACTTGTAAAAACAGTTAATTTTTTTTTTTTATATAGAATTAATTATCAAACTAACTTTGACCAATTAAAATTGTATTTTGGAGTGATTTTGGGTATGACAAAAGTAACTTTAACTATTTTAAAATCATCCCAAACATGCATTTAGATTTAGGCATATCCCAAGCCACTGTTCCCTTCCAACTAGTCGCATTAGAAATTCTATAGTCACGGACAAAAGGTTACGTTTTAAATTTTCACACATAATCCTTCAACCCCAAAAAAGAAAACCTTAAATTCTTCAACTTGTTTGTATTGTTTTTATAATTTTAGACAAAAAAAGGGGGGGTCAACTGCTTCATGTCTTCCTTCTTCCATCTACACTGCCCATATCTGATATTACCAACTCTCCTTTTGTTTTCTTACTTCAGTAAGTGTGGTGGGATGTTCAAACTTCTGACCACTACATCGGGAGCATATGCTTTAACTATATACTTAGATTGACTTGAATGGATTGTGATTTTGGGCACATAATGTAGATTTTCTTGAATGTTGGGTGACTAACCAGTGACAAAATTATTTGTTTGAGCATACAGCGGGTCAGACTGGGGAAACTAGGAACAGAGTCTTTGTGGAGATATATCAAGCACTTCAATCTAGTGGGTCTCACTGCAATTCTTTCAACTTTATGCTTCTCTTTTTTCTGCATAATTGGCTATATTGACTCAATACAATGGTTTTTTTTCCTTTCAAATTTGTAACTTCCAGGTGAATAGCATTTCAAATACTTCAAGGGACCAAATCCTTCAAGTTGTACAACGACATTTTGCATTACAGGTTTTTTTCCTCTCTCTCTCTCTTTGTTTTCATTAGAAGTTATGAACTATTTGTTTGTGTTTGTTTTGTATGATACAGACGAGTTTGAACGAGGCATCAGTGATGACTGAATTCATTCGAGCCGTTAAGAAACGAAGAGAGTGAGGGGGGGAGTGACTGATGATATTGAAAATTGATTCACGTAAATGTATGTTTGTATAGCGATTAATGATTATGCATGTTAACTATATAGTCTACAAACTATGTAAAACTTCTAACTCTCTAACATTGAGTTGATAACGTCCTAGACTCATACTATACTTCTTTTTGCTTCTCTTCCAAGCACGGGTGCATTTAGTATGGGTTTAGGAAAATTGGAGCTTCTCTCAACTTTATGTTTTTATATTATATGTATAAAGAAACTAATATAGTATTAATTTTAGTTGGCTAAGTGGTAAATGCATGCTCCCACTTTTCTTGAGTACCAGG

mRNA sequence

ATGGTGGAGCCAGAGTTTTGTGCTTCCAATATACAATCTCCTTTCCGTGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCCAGGCACACTAAGGTTATTGTCACTGGAAATAATAGAACAAAGTCTGTTTTATTGGGATTGCAAGGGGTGGTTAAGAAAGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGCTACAAAGGAATGCATTGAGTGTGCTGGAACATCCCACAGGAAATGAAAATGATGAACATGATTTGGACAACTCAAGTTGTAGCTCTGACATCGGAGAGAAGGACAATGATTTCTCTAGCAGCGTTGTTTTCCACAAACTCAGCAAACCAAAAGTGAGGCAGATTAAGCCATGGGCTCCATCTTCATCAGCAAAGTCAACTAGTCGGGGCAGCTATGGAGAAATTCAATCTATTCACATGCCAAAGTCAGGGACGCGGGTCAGACTGGGGAAACTAGGAACAGAGTCTTTGTGGAGATATATCAAGCACTTCAATCTAGTGAATAGCATTTCAAATACTTCAAGGGACCAAATCCTTCAAGTTGTACAACGACATTTTGCATTACAGACGAGTTTGAACGAGGCATCAGTGATGACTGAATTCATTCGAGCCGTTAAGAAACGAAGAGAGTGA

Coding sequence (CDS)

ATGGTGGAGCCAGAGTTTTGTGCTTCCAATATACAATCTCCTTTCCGTGAGGAGAGTGGGGATGAAGAGCTTTCAGTTCTTCCCAGGCACACTAAGGTTATTGTCACTGGAAATAATAGAACAAAGTCTGTTTTATTGGGATTGCAAGGGGTGGTTAAGAAAGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGCTACAAAGGAATGCATTGAGTGTGCTGGAACATCCCACAGGAAATGAAAATGATGAACATGATTTGGACAACTCAAGTTGTAGCTCTGACATCGGAGAGAAGGACAATGATTTCTCTAGCAGCGTTGTTTTCCACAAACTCAGCAAACCAAAAGTGAGGCAGATTAAGCCATGGGCTCCATCTTCATCAGCAAAGTCAACTAGTCGGGGCAGCTATGGAGAAATTCAATCTATTCACATGCCAAAGTCAGGGACGCGGGTCAGACTGGGGAAACTAGGAACAGAGTCTTTGTGGAGATATATCAAGCACTTCAATCTAGTGAATAGCATTTCAAATACTTCAAGGGACCAAATCCTTCAAGTTGTACAACGACATTTTGCATTACAGACGAGTTTGAACGAGGCATCAGTGATGACTGAATTCATTCGAGCCGTTAAGAAACGAAGAGAGTGA

Protein sequence

MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKLSKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLVNSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE*
Homology
[Close]
BLAST of CsaV3_4G005860 vs. NCBI nr
Match: XP_004146519.1 (uncharacterized protein LOC101209634 [Cucumis sativus] >XP_011653177.1 uncharacterized protein LOC101209634 [Cucumis sativus] >KGN53330.1 hypothetical protein Csa_015002 [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE
Sbjct: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]
BLAST of CsaV3_4G005860 vs. NCBI nr
Match: XP_008452044.1 (PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo] >XP_008452045.1 PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 4.0e-116
Identity = 218/223 (97.76%), Postives = 219/223 (98.21%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 12  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 71

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNENDE DLDNSSCSSDIGEKDNDFSSSVVFHKL
Sbjct: 72  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 131

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SKPKVRQIK WAPSSSAKST RGSYGEIQSIHMPKSGTRV+LGKLGTESLWRYIKHFNLV
Sbjct: 132 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 191

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISNTSRDQIL VVQRHFALQTSLNEASVMTEFIRAVKKRRE
Sbjct: 192 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 234

[Close]
BLAST of CsaV3_4G005860 vs. NCBI nr
Match: TYK16644.1 (uncharacterized protein E5676_scaffold21G004740 [Cucumis melo var. makuwa])

HSP 1 Score: 428.3 bits (1100), Expect = 4.0e-116
Identity = 218/223 (97.76%), Postives = 219/223 (98.21%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNENDE DLDNSSCSSDIGEKDNDFSSSVVFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SKPKVRQIK WAPSSSAKST RGSYGEIQSIHMPKSGTRV+LGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISNTSRDQIL VVQRHFALQTSLNEASVMTEFIRAVKKRRE
Sbjct: 181 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]
BLAST of CsaV3_4G005860 vs. NCBI nr
Match: KAA0044820.1 (uncharacterized protein E6C27_scaffold74G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115
Identity = 217/223 (97.31%), Postives = 218/223 (97.76%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNENDE DLDNSSCSSDIGEKDNDFSSSVVFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SKPKVRQIK WAPSSSAKST  GSYGEIQSIHMPKSGTRV+LGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKQWAPSSSAKSTGLGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISNTSRDQIL VVQRHFALQTSLNEASVMTEFIRAVKKRRE
Sbjct: 181 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]
BLAST of CsaV3_4G005860 vs. NCBI nr
Match: XP_023534417.1 (uncharacterized protein LOC111795704 [Cucurbita pepo subsp. pepo] >KAG6600567.1 hypothetical protein SDJN03_05800, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031207.1 hypothetical protein SDJN02_05247 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.0 bits (1029), Expect = 6.8e-108
Identity = 202/223 (90.58%), Postives = 211/223 (94.62%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+HDLDNSSCSSD+GEKDND SSS+VFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKL 120

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SK KVRQI+PWAPSSSAK T RGS GEIQSIHMPK  TRV+LGKLGTESLWRYI+HFNLV
Sbjct: 121 SKQKVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISN SRDQIL VVQRHFALQTSLNEASVMTEFIR VK+RRE
Sbjct: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 223

[Close]
BLAST of CsaV3_4G005860 vs. ExPASy TrEMBL
Match: A0A0A0KUM7 (SAP30_Sin3_bdg domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G047910 PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.4e-120
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE
Sbjct: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]
BLAST of CsaV3_4G005860 vs. ExPASy TrEMBL
Match: A0A1S3BU28 (uncharacterized protein LOC103493170 OS=Cucumis melo OX=3656 GN=LOC103493170 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116
Identity = 218/223 (97.76%), Postives = 219/223 (98.21%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 12  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 71

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNENDE DLDNSSCSSDIGEKDNDFSSSVVFHKL
Sbjct: 72  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 131

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SKPKVRQIK WAPSSSAKST RGSYGEIQSIHMPKSGTRV+LGKLGTESLWRYIKHFNLV
Sbjct: 132 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 191

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISNTSRDQIL VVQRHFALQTSLNEASVMTEFIRAVKKRRE
Sbjct: 192 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 234

[Close]
BLAST of CsaV3_4G005860 vs. ExPASy TrEMBL
Match: A0A5D3D093 (SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004740 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116
Identity = 218/223 (97.76%), Postives = 219/223 (98.21%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNENDE DLDNSSCSSDIGEKDNDFSSSVVFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SKPKVRQIK WAPSSSAKST RGSYGEIQSIHMPKSGTRV+LGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISNTSRDQIL VVQRHFALQTSLNEASVMTEFIRAVKKRRE
Sbjct: 181 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]
BLAST of CsaV3_4G005860 vs. ExPASy TrEMBL
Match: A0A5A7TNP9 (SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001110 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115
Identity = 217/223 (97.31%), Postives = 218/223 (97.76%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGNENDE DLDNSSCSSDIGEKDNDFSSSVVFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SKPKVRQIK WAPSSSAKST  GSYGEIQSIHMPKSGTRV+LGKLGTESLWRYIKHFNLV
Sbjct: 121 SKPKVRQIKQWAPSSSAKSTGLGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISNTSRDQIL VVQRHFALQTSLNEASVMTEFIRAVKKRRE
Sbjct: 181 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]
BLAST of CsaV3_4G005860 vs. ExPASy TrEMBL
Match: A0A6J1IZT1 (uncharacterized protein LOC111481424 OS=Cucurbita maxima OX=3661 GN=LOC111481424 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.6e-108
Identity = 201/223 (90.13%), Postives = 210/223 (94.17%), Query Frame = 0 

Query: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+HDLDNSSCSSD+GEKDND SSS+VFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKL 120

Query: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180
           SK KVRQI+PWAPSSSAK T RGS GEIQS HMPK  TRV+LGKLGTESLWRYI+HFNLV
Sbjct: 121 SKQKVRQIRPWAPSSSAKPTGRGSCGEIQSFHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180

Query: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           NSISN SRDQIL VVQRHFALQTSLNEASVMTEFIR VK+RRE
Sbjct: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 223

[Close]
BLAST of CsaV3_4G005860 vs. TAIR 10
Match: AT1G75060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 9.4e-47
Identity = 106/209 (50.72%), Postives = 143/209 (68.42%), Query Frame = 0 

Query: 9   SNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKN 68
           S +QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL N
Sbjct: 20  SQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTN 79

Query: 69  GVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKLSKPKVRQI 128
           G+EVKLQRNALSVLEHPTGNE D +DL+    +      D     ++  HK SK +  + 
Sbjct: 80  GIEVKLQRNALSVLEHPTGNEED-NDLEVDHSTQWNHPSDMTTEDTLKPHK-SKKRGHRS 139

Query: 129 KPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLVNSISNTSR 188
              +  +  +  S  S+ +I SI  P+   +V L KL   +L RY +HFNLV+++ N ++
Sbjct: 140 SRLSQKALYREVSCDSHSKISSI-TPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTK 199

Query: 189 DQILQVVQRHFALQTSLNEASVMTEFIRA 218
           +Q++ ++QRHF  Q  ++E  V+  F++A
Sbjct: 200 EQLIDIIQRHFMSQ-QMDELQVIVGFVQA 224

[Close]
BLAST of CsaV3_4G005860 vs. TAIR 10
Match: AT1G19330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 9.4e-47
Identity = 111/216 (51.39%), Postives = 145/216 (67.13%), Query Frame = 0 

Query: 11  IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGV 70
           IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+
Sbjct: 18  IQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGI 77

Query: 71  EVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKLSKPKVRQIKP 130
           EVKLQRNALSVLE PTGNE D+ DLD  +   +  +    F +S    K  K K+R  + 
Sbjct: 78  EVKLQRNALSVLEPPTGNEEDD-DLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQR- 137

Query: 131 WAPSSSAKSTSRGSYGEIQSI---HMPKSGTRVRLGKLGTESLWRYIKHFNLVNSISNTS 190
            +  SS K+ SR    + QS      P    +V L KL   +L  Y +HFNLV++I N S
Sbjct: 138 -SSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNYWRHFNLVDAIPNPS 197

Query: 191 RDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           ++Q++ +VQRHF  Q  ++E  V+  F++A K+ ++
Sbjct: 198 KEQLIDIVQRHFMSQ-QMDELQVIVGFVQAAKRMKK 229

[Close]
BLAST of CsaV3_4G005860 vs. TAIR 10
Match: AT1G19330.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1). )

HSP 1 Score: 184.5 bits (467), Expect = 9.4e-47
Identity = 111/217 (51.15%), Postives = 147/217 (67.74%), Query Frame = 0 

Query: 11  IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGV 70
           IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+
Sbjct: 18  IQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGI 77

Query: 71  EVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKLSKPKVRQIKP 130
           EVKLQRNALSVLE PTGNE D+ DLD  +   +  +    F +S    K  K K+R  + 
Sbjct: 78  EVKLQRNALSVLEPPTGNEEDD-DLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQR- 137

Query: 131 WAPSSSAKSTSRGSYGEIQS----IHMPKSGTRVRLGKLGTESLWRYIKHFNLVNSISNT 190
            +  SS K+ SR    + QS       P++  +V L KL   +L  Y +HFNLV++I N 
Sbjct: 138 -SSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLNYWRHFNLVDAIPNP 197

Query: 191 SRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
           S++Q++ +VQRHF  Q  ++E  V+  F++A K+ ++
Sbjct: 198 SKEQLIDIVQRHFMSQ-QMDELQVIVGFVQAAKRMKK 230

[Close]
BLAST of CsaV3_4G005860 vs. TAIR 10
Match: AT1G19330.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-45
Identity = 111/218 (50.92%), Postives = 146/218 (66.97%), Query Frame = 0 

Query: 11  IQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGV 70
           IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG+
Sbjct: 18  IQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGI 77

Query: 71  EVKLQRNALSVLEHPTGNENDEH-DLDNSSCS-SDIGEKDNDFSSSVVFHKLSKPKVRQI 130
           EVKLQRNALSVLE PTGNE D+  D +N+  + SD+  +D          K  K K+R  
Sbjct: 78  EVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMTSEDT--------LKPHKSKLRGQ 137

Query: 131 KPWAPSSSAKSTSRGSYGEIQSI---HMPKSGTRVRLGKLGTESLWRYIKHFNLVNSISN 190
           +  +  SS K+ SR    + QS      P    +V L KL   +L  Y +HFNLV++I N
Sbjct: 138 R--SSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNYWRHFNLVDAIPN 197

Query: 191 TSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 224
            S++Q++ +VQRHF  Q  ++E  V+  F++A K+ ++
Sbjct: 198 PSKEQLIDIVQRHFMSQ-QMDELQVIVGFVQAAKRMKK 224

[Close]
BLAST of CsaV3_4G005860 vs. TAIR 10
Match: AT1G75060.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 179.1 bits (453), Expect = 3.9e-45
Identity = 106/209 (50.72%), Postives = 142/209 (67.94%), Query Frame = 0 

Query: 9   SNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKN 68
           S +QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL N
Sbjct: 20  SQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTN 79

Query: 69  GVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKLSKPKVRQI 128
           G+EVKLQRNALSVLEHPTGNE D +DL+    +      D     ++  HK SK +  + 
Sbjct: 80  GIEVKLQRNALSVLEHPTGNEED-NDLEVDHSTQWNHPSDMTTEDTLKPHK-SKKRGHRS 139

Query: 129 KPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLVNSISNTSR 188
              +  +  +  S  S+ +I SI  P+    V L KL   +L RY +HFNLV+++ N ++
Sbjct: 140 SRLSQKALYREVSCDSHSKISSI-TPRL-NMVDLTKLDMAALLRYWRHFNLVDALPNPTK 199

Query: 189 DQILQVVQRHFALQTSLNEASVMTEFIRA 218
           +Q++ ++QRHF  Q  ++E  V+  F++A
Sbjct: 200 EQLIDIIQRHFMSQ-QMDELQVIVGFVQA 223

The following BLAST results are available for this feature:
BLAST of CsaV3_4G005860 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146519.11.3e-119100.00uncharacterized protein LOC101209634 [Cucumis sativus] >XP_011653177.1 uncharact... [more]
XP_008452044.14.0e-11697.76PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo] >XP_008452045.1 P... [more]
TYK16644.14.0e-11697.76uncharacterized protein E5676_scaffold21G004740 [Cucumis melo var. makuwa][more]
KAA0044820.12.6e-11597.31uncharacterized protein E6C27_scaffold74G001110 [Cucumis melo var. makuwa][more]
XP_023534417.16.8e-10890.58uncharacterized protein LOC111795704 [Cucurbita pepo subsp. pepo] >KAG6600567.1 ... [more]
BLAST of CsaV3_4G005860 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G005860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUM76.4e-120100.00SAP30_Sin3_bdg domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G047... [more]
A0A1S3BU281.9e-11697.76uncharacterized protein LOC103493170 OS=Cucumis melo OX=3656 GN=LOC103493170 PE=... [more]
A0A5D3D0931.9e-11697.76SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7TNP91.3e-11597.31SAP30_Sin3_bdg domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1IZT19.6e-10890.13uncharacterized protein LOC111481424 OS=Cucurbita maxima OX=3661 GN=LOC111481424... [more]
BLAST of CsaV3_4G005860 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G75060.19.4e-4750.72unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G19330.19.4e-4751.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G19330.39.4e-4751.15unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G19330.21.4e-4550.92unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G75060.23.9e-4550.72unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025718Histone deacetylase complex subunit SAP30, Sin3 binding domainPFAMPF13867SAP30_Sin3_bdgcoord: 165..219
e-value: 3.3E-16
score: 59.3
IPR038291SAP30, C-terminal domain superfamilyGENE3D6.10.160.20coord: 142..223
e-value: 7.7E-17
score: 63.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..103
NoneNo IPR availablePANTHERPTHR13286:SF8OS04G0166600 PROTEINcoord: 1..222
IPR024145Histone deacetylase complex subunit SAP30/SAP30-likePANTHERPTHR13286SAP30coord: 1..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G005860.1CsaV3_4G005860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding